Arvicanthis niloticus (African grass rat): 117699017
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Entry
117699017 CDS
T08817
Symbol
Neo1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04350
TGF-beta signaling pathway
anu04360
Axon guidance
anu04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117699017 (Neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117699017 (Neo1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
117699017 (Neo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117699017 (Neo1)
Cell adhesion molecules [BR:
anu04515
]
Immunoglobulin superfamily
DCC/UNC5 family
117699017 (Neo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
C2-set_2
Ig_5
fn3_2
fn3_SORL1
Tissue_fac
Fn3_Dep-1_3rd
Izumo-Ig
EphA2_TM
TMEM154
TM_ErbB1
Herpes_UL74
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
117699017
NCBI-ProteinID:
XP_034346581
LinkDB
All DBs
Position
Unknown
AA seq
1492 aa
AA seq
DB search
MAAEREARRLLSTSSSRRCCPPPPPLLLLLPLLLLGRPASGAAAAKSGSPPQSAGASVRT
FTPFYFLVEPVDTLSVRGSSVILNCSAYSEPSPNIEWKKDGTFLNLVSDDRRQLLPDGSL
FISNVVHSKHNKPDEGFYQCVATVDNLGTIVSRTAKLTVAGLARFTSQPEPSSVYVGNSA
ILNCEVNADLVPFVRWEQNRQPLLLDDRIVKLPGGTLVISNATEGDAGLYRCIVESGGPP
KFSDEAELKVLQAPEEIADLAFLMRPSSIIRVTGQSAVLPCVASGLPVPVIRWMKNKEVL
DTESSERLVLLAGGSLEISDVTEDDAGTYFCIADNGNKTVEAQAELTVQVPPEFLKQPAN
IYAHESMDIVFECEVTGKPTPTVKWVKNGDVVIPSDYFKIVKEHNLQVLGLVKSDEGFYQ
CIAENDAGDTQAGAQLIILEHDVAIPTLPPTSLTSATTDHLAPATTGPLPSAPRDVVASL
VSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSQPGEMQVTIQNLMPATVY
IFKVMAQNKHGSGESSAPLRVETQPEVQLPGPAPNIRAYATSPTSITVTWETPLSGNGEI
QNYKLYYMEKGTDKEQDIDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTL
SDVPSAAPQNLSLEVRNSKSIVIHWQPPSSATQNGQITSYKIRYRKASRKSDVTETVVAG
TQLSQLIEGLDRGTEYNFRVAALTVNGTGPATDWLSAETFESDLDETRVPEVPSSLHVRP
LVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITL
KAFNNVGEGIPLYESAVTRPHTDTSEVDLFVINAPYTPVPDPTPMMPPVGVQASILSHDT
IRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFS
VMVTKGRRSSTWSMTAHGATFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITG
YIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQF
RTPKADSSDKMPNDQALGSAGKGSRLPDLGSDYKPPMSGSNSPHGSPTSPLDSNMLLVII
VSVGVITIVVVVIVAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNCKDVKPPDLWIHHER
LELKPIDKSPDPNPVMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAG
RRGMRPKMMMPFDSQPPQPVISAHPIHSLDNPHHHFHSSSLASPARSHLYHPSSPWPIGT
SMSLSDRANSTESVRNTPSTDTMPASSSQTCCTDHQDPEGATSSSYLASSQEEDSGQSLP
TAHVRPSHPLKSFAVPAIPPPGPPIYDPALPSTPLLSQQALNHHIHSVKTASIGTLGRSR
PPMPVVVPSAPEVQETTRMLEDSESSYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcgcgaagcccggcgactcctcagcacctcctcctcccggcgctgctgc
ccgccgccaccgccgctgctgctgttgctgccgctgctgctgctcgggcgcccggcgtct
ggcgccgcggccgcgaagagcggttccccgccgcagtctgcaggagccagtgttcgaaca
ttcactccgttttattttctggtggagccagtagacacactctcagttagaggctcttct
gtcatattaaactgctccgcatattctgagccttctccaaatattgaatggaagaaagat
gggacttttttaaacttagtatcagatgatcgccgccagcttctcccagatggatcctta
ttcatcagcaacgtggtgcattccaaacacaataagcccgatgagggtttctatcagtgt
gtagccacggttgataaccttggaaccattgtcagcagaacagccaagctcacagtagca
ggtcttgcaagatttaccagccaaccagaaccttcttcagtctatgttggaaacagtgca
attctgaattgtgaagttaatgcagatttggtcccatttgttaggtgggaacagaataga
cagccccttcttctggatgacaggattgtcaaacttccaggtggaacactggtcatcagc
aatgcgactgaaggagatgcgggactctaccgctgcattgttgaaagtggtgggccacca
aagttcagtgatgaggccgaattgaaagttcttcaagctcctgaggaaattgcagacttg
gcatttttgatgcgaccatcttctataatcagagtcactggtcagagtgcagtgttgcca
tgtgttgcctcagggcttcctgttccagtcattagatggatgaaaaacaaagaagtgctt
gacacagaaagctctgaaaggttggtcttgctagcaggaggtagtttggagatcagtgat
gtcactgaggatgatgctgggacttatttttgtatagctgataatggaaataagacagtt
gaagctcaggcggagcttactgtacaagtgccacctgaattcttgaaacaacctgctaac
atatatgctcatgaatccatggatattgtatttgaatgtgaagtcactgggaagccaact
ccaactgtgaagtgggtcaagaacggggatgtggttatcccaagtgactactttaaaatt
gtaaaggaacataatcttcaagttttgggtctggtgaagtcagatgaagggttctatcaa
tgcattgctgagaatgatgctggagatacacaagctggggcccagctgataattcttgag
catgatgttgccatcccaacattacctcccacttcactgaccagtgccactactgaccat
ctagcaccagccacaacgggaccactgccttcagctcctcgagacgtcgtggcctccctg
gtctctactcgcttcattaaattgacatggcgtacacctgcatcagatcctcatggagac
aatctcacctactctgtgttctacaccaaggaagggattgctagggagcgtgttgagaat
accagtcagccaggagagatgcaggtgactattcaaaacttaatgccagcaactgtgtac
atcttcaaagttatggctcaaaataagcatggctctggagagagttcagctcctctacga
gtggaaacacagcctgaggttcagctccctggcccagcacctaatatccgagcttatgca
acgtcacctacttctatcactgtcacgtgggaaacaccattgtctggcaatggggaaatt
cagaattacaaattgtactacatggaaaaaggaactgataaagaacaggatattgatgtt
tcaagtcactcctacaccattaatggactgaagaagtacacagaatatagtttccgagtg
gtggcctacaataaacatggtcctggagtctctacacaagatgttgctgttcgaacatta
tcagatgtgcccagtgctgctcctcagaatctgtccttagaagtgagaaattcaaagagt
atagtgatccactggcagcccccgtcctcggccacacaaaatgggcagattactagctac
aagattcgatatcgaaaggcctcccgaaaaagtgatgtcactgagaccgtggtagctggg
acacagctgtctcagctgattgaaggtcttgatcgcgggacagaatataacttccgagta
gctgctctcacagtcaatggtacaggtccagcaactgattggctgtctgctgaaactttt
gaaagtgacctagatgaaactcgtgttcctgaagtgcccagctctcttcatgtccgtccg
cttgtcactagcattgtagtaagctggactcctccagagaaccagaacattgtggttcga
ggttatgccattggttatggcattggcagccctcatgcccagaccatcaaagtggactat
aaacagcgttattacaccatcgaaaacttggatccaagctctcattacgtgattaccttg
aaagcattcaacaatgttggtgaaggcatccccctttatgagagtgctgtgaccaggcct
cacacagacacttctgaagttgatttatttgttattaatgctccatacactccagtgcca
gatcccactcccatgatgccaccagtgggagttcaggcttccattctgagtcacgacacc
ataaggattacctgggcagacaactccctgcccaaacaccagaagattacagactcccgc
tactacacagtccgatggaagaccaacatcccagcaaacaccaagtacaagaatgcaaat
gcaacaacgttaagctatttggttactggtttaaagccaaatacgctctatgagttctct
gtgatggtgaccaaaggcagaagatcaagtacgtggagcatgacagctcatggggctacc
tttgaattagttcctacttctccacctaaggatgtgacagttgtgagtaaggaaggaaaa
cctagaaccataatagtgaactggcagcctccctctgaagcgaacggcaagattacaggt
tacatcatctattacagcacagatgtcaatgcagagatacatgactgggttattgaacct
gttgtgggaaacagactgactcaccagattcaagagttaacacttgatacaccatactac
ttcaaaatccaggcccggaactcaaagggcatgggacccatgtctgaggctgtacagttc
agaacaccgaaagcggactcctctgataaaatgcctaatgaccaagccttaggatcagca
ggaaaaggaagccgactgccagacctaggatctgactacaaacctccaatgagtggcagc
aacagccctcatgggagccccacctctcctctggacagcaacatgctgctggtcatcatc
gtctccgtcggcgtcatcaccatcgtggtggttgtgatcgttgctgtcttttgtacccgg
cgcaccacctctcaccagaagaagaaacgagctgcctgcaaatcagtgaacggctcccat
aagtacaagggcaactgcaaagacgtgaagcctccagacctgtggatccatcacgagaga
ctagagctaaagcctattgacaagtctccagatccaaatcctgtcatgactgatactccg
atccctcgaaactctcaagacatcacaccagtggacaattccatggatagcaatatccac
caaaggcggaattcatacagagggcatgagtcagaggacagcatgtctacactggctgga
aggaggggaatgagaccaaaaatgatgatgccctttgactctcagcctcctcagcctgtg
attagtgcccatcccatccattccctcgataaccctcaccatcatttccactccagcagc
ctcgcttctccagcccgcagtcatctctaccatccaagcagcccatggcccattggcaca
tccatgtccctttcagacagggccaattccacagaatctgttcgaaatacccccagcacg
gacaccatgccagcatcctcatctcagacatgctgcactgatcatcaggatcctgaaggt
gctactagctcctcttacttggccagctcccaagaggaagactcgggacagagtcttccc
acagcccatgtccgcccttcccacccactgaagagctttgctgtgccagcaatcccaccc
ccgggaccgcccatctatgaccctgcactgccaagcacaccattactgtcccagcaagct
ctgaaccatcacatccactcagttaaaacagcctccatcgggactttaggaaggagccgg
cctcctatgccagtggttgttccgagtgcccctgaagtacaggagaccaccaggatgctg
gaagactcggagagtagctatgaaccagatgagctgaccaaagagatggcccacctggaa
ggactaatgaaggacctaaatgccatcaccacagcctga
DBGET
integrated database retrieval system
