Arvicanthis niloticus (African grass rat): 117699117
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Entry
117699117 CDS
T08817
Symbol
Nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117699117 (Nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117699117 (Nfrkb)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
117699117 (Nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
117699117
NCBI-ProteinID:
XP_034346778
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGDGHSTGIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWQE
VLSDSQREHLQRFLPQFPTDSVEQQSELILALFSGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLNSQQQYFHRLLKQILASRSDLLEMARRSGPALPFRHKHRSPSRS
PEEREWRTQQRYLKVLREVKEECGDTALSSDEEDLSSWLPSSPARSPSPAVPLRVVPTLS
TTDMKTADKIELGDSDLKLMLKKHHEKRKHQPDHPDLLTGDLTLSDIMTRVNAGRKGSLA
ALYDLAVLKKKVKEKEEKKKKKIKLIKLETEDLAEPLSNTEGVPTLSQAPSPLAISSIKE
EPLEDIKPCLGINEISSSFFSLLLEILLLESQASLPTLEDRVLDWQSSPASSLNSWFSAA
PNWAELVLPALQYLAGESRAVPSSFSPFVEFKEKTQQWKLLSQSQDNEKELAALFHLWLE
TKDQAFCKQENEDSSDAMTPVPRVRTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTFRM
HGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEI
CELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFE
RIHQAQAAAAKARKALQQKPKPPSKVKSSNKEGSVKGLSGPSEQSQLSLSDSSMPATPVT
PVTPTTPALPTPISPPPVSAVNRSVSTTVSEPAKSSSGVLLVSSPTVPQLGTMLSPTSIQ
TPPSSQATARVVSHSSSAGLPQVRVVAQPSLPAVSQQSVGPAQPLPQMPAGPQIRVPVTA
TQTKVVPQAVMATVPVKGQTPAASVQRPGPGQTGLTVTNLPAAVSPVSKTAMSSPGNSAP
SASTTAVIQNVTGQNIIKQVSITGQLGVKPQTGNSIPLTATNFRIQGKDVLRLPPSSITT
DAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGAGSGTAGKGISATLHVTSNPVHAADS
PAKAPSASVPSSAPAGTTVVKVTPDLKPTETSNSAFRLMPALGVSVADQKGKNTVASSEA
KPAATIRIVQGLGVMPPKAGQTITVAAHAKQGASVAGGSGTVHSSTVSLPSINATVSKTV
AVASGATSTPISIGTGAPTVRQVPVNTTVVSTSQSGKLPTRITVPLSVISQPMKGKSVVT
APIIKGNLGANLSGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQATQQVRI
QTVPASHLQQGTASGSSKAVSTVVVTTAPSPKQAPEQQ
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggattccttggatcacatgctgacagaccccttagaacttggtccttgtggagatggt
cacagtacagggatcatggaggactgccttctgggtggtaccagggttagtctgcctgaa
gaccttctggaggatcctgagatattctttgacgtcgtcagcctctccacatggcaggaa
gtactaagtgactctcagcgtgaacatctccagcggtttctgcctcagtttcctacagac
agtgtagagcagcagagtgagctcattcttgccctgttcagtggggagaacttccgcttc
ggaaaccctctgcacatcgcccagaagctcttccgagatggacactttaaccctgaggtg
gtcaagtatcgtcagctctgcttcaagtcacagtacaagcggtatctcaactcccaacag
cagtatttccaccggctgctaaaacagattcttgcttccaggagtgatctcttggagatg
gctcgtaggagtggcccggctcttccctttcgacacaagcaccgttcaccatcccgaagc
cctgaggagcgggagtggcggacccaacagcgttacctgaaagtcttgagggaggtgaag
gaggagtgtggggacactgccctgtcctctgatgaggaggatctcagctcatggcttcca
agctctccagcacgttctcctagtcctgcggtgcccctgagggtggtgcccacgctttcc
accacagatatgaaaactgcagataaaatagaactgggggacagtgacctgaagttaatg
ttaaagaagcaccatgagaagcggaaacatcaaccagatcacccagaccttttgacaggg
gacctgaccctcagtgacatcatgactcgagtaaatgccggcaggaagggctctttagca
gctttgtatgatttggctgttcttaaaaaaaaggtgaaggaaaaggaggagaagaaaaag
aagaaaataaagttgattaagttggagacagaggatctggctgagcccctaagcaatact
gaaggggttccaactctctcacaggccccctctcccctggcaatatcatctatcaaggaa
gaacccctggaagacatcaagccttgccttggaatcaatgaaatatcttccagttttttc
tctcttctgttagaaatcttgctgctggagagtcaggctagtcttcctacgctggaggat
cgagttttggactggcagtcttctccagccagctccctcaacagctggttctctgctgct
cccaactgggctgagttggtgttgcctgctttgcagtaccttgctggagaaagccgagcg
gttccttccagtttctctccatttgttgaattcaaagagaaaacccagcagtggaaattg
cttagtcaatctcaagataatgaaaaagaattagctgctctattccacctgtggttggaa
accaaagaccaggccttctgtaagcaggaaaatgaagacagctctgatgccatgacacct
gtccctcgagtaagaactgactatgtggttcggcctagcacaggagaggagaaacgggtt
tttcaagagcaggagcgttacaggtatagccaaccccataaggcattcacctttcgcatg
catggctttgagtctgtggtggggccagtgaagggcgtgtttgacaaggagacctccctc
aacaaggctcgtgagcattcactgctgcgctctgaccggcctgcctatgtcaccattctg
tctcttgttcgggatgctgcagctcggctgcctaatggagaaggcactcgggcagagatc
tgtgaactgctcaaggactcgcagtttcttgctccagatgtcaccagcactcaggtgaac
acagtagtgagtggtgcactggatcgattgcattatgagaaagacccttgtgtgaaatat
gacattggtcggaagctgtggatctatttgcatcgtgaccggagtgaggaagagtttgaa
cggattcatcaagctcaagcggcagcagctaaagccagaaaagctcttcagcaaaaaccc
aagccgccatccaaggtgaaatccagtaataaggagggctccgtgaagggccttagtggt
ccttccgagcaaagccagctaagcctcagtgactccagtatgccagctaccccagttacg
cctgtaacccccaccacgccagcattgcccacccccatctctcctccacctgtgtcagcg
gtaaacagaagtgtctctaccactgtctctgagccagccaagtctagttcaggtgttctt
ctggtgtcctcaccaacagtgccacagctaggaacgatgctttccccaacttccatccag
actccacccagttctcaggccactgctcgggttgtcagtcattccagctcagcaggacta
ccccaggttcgggtggtagcccagcccagccttcctgctgtttcccagcagtcagtaggg
ccagcacagccactaccccagatgccagcaggaccacagattcgtgtgccagtcactgct
acccaaaccaaagtagtacctcaggcagttatggcaacagttccagtcaaggggcaaact
ccagcggcctctgtgcaacggcctggacctgggcagacaggacttacagtgacaaatctt
cctgctgcagtcagccccgtgagcaagacagccatgagttctcctgggaactctgctcca
agtgcctccacaacagctgtcattcagaatgtcacaggacagaacatcatcaagcaggtg
tcaatcactgggcagcttggtgtgaagccccagacaggcaacagcattccactcacagcc
acaaacttccgtatccagggtaaagatgtactgcgcctgccgccttcttccatcaccaca
gatgccaagggccagacggttttgagaatcactccagacatgatggccacattggccaag
tctcaggttaccacagtcaaactgactcaggacctctttggggcaggaagtggcactgca
ggcaaaggcatctctgctaccttgcatgttacttctaaccctgtccacgcagctgacagc
cctgccaaggccccttcggccagtgttccttcatcagctccagcaggtacaaccgtggtc
aaagtaactcctgatctcaagccaacagaaacttcgaattcagcttttcgcttgatgcca
gctcttggtgtgagtgtggccgatcagaagggaaagaacacagtggcctcttcagaagca
aaacctgctgccaccatccgcattgtgcagggcctgggtgtgatgcctcctaaagcaggc
cagaccattactgttgcagcacatgcaaagcaaggagcctctgttgctggtgggtctgga
actgtccactcttcaacagtgtccttacccagtataaatgccactgtgtccaagactgtg
gctgtggcttctggggcaacaagcactcccatcagcatcgggactggagcccccaccgtg
cgacaggttcctgttaacactacagttgtgtccacatcccagtctgggaagctgcctacg
aggatcacagttcctctctctgtgattagccagccaatgaagggcaagagcgtggttacg
gcccccatcatcaaaggcaatcttggagccaatctcagtgggctgggtcgcaacatcatc
ctcacaaccatgccagcaggtactaagctcattgctggcaataagccagtgagtttcctc
actgcccagcagttgcagcagcttcagcaacaaggtcaggctacacagcaggtgcgcatc
cagaccgtcccagcatcccatctgcagcagggtacagcttctggctcctccaaagcagtg
tccactgttgttgtgaccacagctccatctcctaaacaagcacctgagcaacagtga
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integrated database retrieval system
