Arvicanthis niloticus (African grass rat): 117699240
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Entry
117699240 CDS
T08817
Symbol
Lingo1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117699240 (Lingo1)
Membrane trafficking [BR:
anu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117699240 (Lingo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_Zer-1
LRR_9
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
117699240
NCBI-ProteinID:
XP_034346989
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MQVSERMLAGGMRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIG
TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGN
LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
CRRAHIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
TLEVRYAQVQDNGTYLCIATNAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
KSDAGISSADAPRKFNMKMI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgagcgagaggatgctggcagggggtatgagaagcatgcccagccccctcctg
gcctgctggcagcccatcctccttctggtactgggctctgtgctgtcaggctctgccaca
ggctgcccgccccgctgcgagtgctcagcgcaggaccgagccgtgctctgccaccgcaag
cgctttgtggcggtgcccgagggcatccccaccgagactcgcctgctggacctgggcaaa
aaccgcatcaagacactcaaccaggacgagtttgccagcttcccacacctggaggagcta
gaactcaacgagaacatcgtgagcgccgtggaaccgggcgccttcaacaacctcttcaac
ctgaggacgctggggcttcgcagcaaccgcctgaagctcatcccgctgggcgtcttcacc
ggcctcagcaacttgaccaagctggacatcagtgagaacaagattgtcatcctgctagac
tacatgttccaagacctatacaacctcaagtcgctggaggtcggcgacaacgacctcgtc
tatatctcccatcgggccttcagcggcctcaacagcctggaacagctgacgctggagaaa
tgcaatctgacctccatccccaccgaggcgctctcccacctgcatggcctcatcgtcctg
cggctacgacatctcaacatcaatgccatcagggactactccttcaagaggctgtaccga
ctcaaggtcttagagatctcccactggccctacctggacaccatgacccccaactgcctc
tatggcctcaacctgacatccctatccatcacacactgcaacctgacagccgtgccctat
ctggcagtgcgccacctggtctatctccgtttcctcaacctttcctacaaccccatcggt
acaatcgagggctcgatgctgcatgagctgctgcggttgcaagagatccagctggtgggc
gggcagctagccgtggtggagccttacgcctttcgtgggctcaactacctgcgtgtgctc
aatgtctctggcaaccagctgaccaccctggaggagtcagccttccactcggtgggcaac
ctggagacgctcatcctggactccaacccactggcctgtgactgccggctgctgtgggtg
ttccggcgccgctggcggctcaacttcaaccggcagcagcccacctgcgccactcctgag
ttcgtccagggcaaggagttcaaggactttccggatgtgctcctacccaactacttcacc
tgccgccgggcccacatccgggaccgcaaggcacagcaggtgtttgtagatgagggccac
acggtgcagtttgtatgccgggcagatggggaccctccaccagctatcctttggctctca
ccccgcaagcacttggtctcggccaagagcaatgggcggctcacagtcttccctgatggc
acgctggaggtgcgctacgcccaggtacaggacaacggcacgtacctgtgcatcgcaacc
aatgctggcggcaacgactccatgcccgcccacttgcatgtgcgcagctactcgcctgac
tggccccatcaacccaacaagaccttcgccttcatctccaaccagccgggcgagggagag
gccaacagcactcgcgccactgtgcctttccccttcgacatcaagacgctcatcatcgcc
accaccatgggcttcatctccttcctgggcgttgtcctgttctgcctggtgctgctgttt
ctctggagccggggcaaaggcaacacaaagcacaacatcgaaattgagtatgtgccccgg
aaatcggacgcaggcatcagctcagctgatgcaccccgcaagttcaacatgaagatgata
tga
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