Arvicanthis niloticus (African grass rat): 117699314
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Entry
117699314 CDS
T08817
Symbol
Ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1 isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anu03400
]
117699314 (Ap5b1)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
117699314 (Ap5b1)
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
117699314
NCBI-ProteinID:
XP_034347094
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All DBs
Position
1:114018637..114021899
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AA seq
978 aa
AA seq
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MPFVGGRFNELSARTSRAPPPRSLRVLSCRRLGCCFRHHLQSLQISSWDLGIGGLCWGLQ
DGPRVTAAPQGRWRTWAPSSGRKALRVFVAVSDAPSLCREGTMGPLSREAWAQRLGAFRA
SPSAFLTGAEGEDLGRDLLSDLRSEKLSEQTKVSLLTLSLEYSDKLWPDATAAEAAATSL
LDTLVLLPSRPSALRRLLLLAATTAVVSGGALGPTSGASCRLLPLLLGLASGRDMGRSFG
TTSEQRHLQATACECLRELERCKPGLLAGALGMLRSLLGQMGPIQPVSLLLALVLHNTLV
VQSRSGAGLQGRLVAEDSSTGSCPWDWTMAGEWDAHLKPQTPSWPTAGGEERGFPVLEPS
PEDTRELKAAVAQLLDTSYLLTPVSQAQLLWLLGWALRGLRGQPPVLFKPQLVRLLGTAH
LTLLHSVLSLKAAFGEALFTAQDEGLLLRRLTLVAQHPALPSPTHLFYLHCVLSFPENCP
LGPEGEEAAPLLLGPQLCQGLMPSLLHDPMVLLARLHLLCLLCADDEEEEKGQLQGPQWF
LQELLAGLQQRAALDGGPRALATLCFQASYLVTSCLTRRPAVRTALIHGLAQLYRARPSL
APHFVDLLDQVNPELREPLREVLLQEVVARPGKNEALCWHLQMLAKVAEGATQSATLGFL
QAAAVHCTDWGLQQALLRVCRALLRTGGGDGLADLLQKLARQLENADGRDHARLYYVLLS
HLSSSKLGMALGPSLAAPALASSLMAENQGFASALMVQETSAPVQLSVGPRKAKGPLPVL
YLQVQALGAPVYSLELRFRVEGQVYKPLEAVHIPCLRPGQPAHSLYLPLQPRCPAPARLH
VRALYSTPAGLTCHAHLPPLSVTFADLFLPFPELPKGSELCFFDELWNSCLPKGVESRVW
CPLGPQGLEALVSQHLEPFVVVAQPPTTYLIAVRLPPDSMLLLRLEKAQVDGVPVALRTD
DWAVLPLVGDYLRGLAAH
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcgtaggcgggaggtttaatgagctctctgcacgcacctcccgggcaccccca
ccccgatcgctgcgggtcctatcctgcaggcgtctaggctgttgcttccggcatcatctc
caaagcctccagatttcatcttgggacctaggcatcgggggtctctgctggggtctgcaa
gacggccctagggtgacagcagcccctcagggaaggtggaggacctgggcgccctctagc
ggccgtaaagccctgcgtgtcttcgtcgccgtgtctgacgctccttccctttgcagagaa
gggaccatggggcccctgagtcgagaagcctgggcccagcgcctgggggctttccgagcc
agcccatccgcctttctgacgggtgccgaaggtgaggatttgggtcgcgacctgttgagt
gacctaaggagtgaaaagctaagcgagcagaccaaggtttccttactgaccctgagcttg
gagtactctgacaaactttggcctgatgcaactgccgcagaggctgctgccacctccttg
ttggacacgcttgtcctcctgccctcaagaccttcagctctccggaggctcctgttgttg
gcagccactacagccgtggtgtcaggaggtgctcttggacccacttcgggagcttcctgc
cgtctcctgcccttacttcttggcttagcttcaggccgagacatgggaagaagctttgga
accacctcagaacagcgccatctacaggccacagcgtgtgaatgccttcgagaacttgag
cgctgtaagcctgggctgctagccggcgccctggggatgctgcggagcctcctagggcaa
atgggtcccatccagcctgtcagcctgcttctggcccttgttctgcacaacaccttggtg
gtccagtccaggtctggggctggcctgcaaggccggctcgtggctgaggactcctccact
gggagttgtccctgggactggacgatggctggagagtgggatgcccatcttaagccccag
acgcccagctggcccacagctgggggggaggagcgcggctttccagttctagagcccagc
cctgaggacacccgagagctgaaggctgcagtggcccagcttctggacacttcctatctg
ctcactcccgtgtctcaggctcaacttctgtggctattgggctgggcccttcggggtctt
cggggacagccaccagtgcttttcaagccacaactagttcggctgctgggcacagcacat
ctgacactgttacactcagttctctctctcaaggcggccttcggtgaggccctgttcact
gctcaggatgaaggcctgctgcttcgaaggctcaccttggtagcccagcacccagcccta
ccctcgcccacacacctcttttacctgcattgcgtcctgagcttccctgagaattgtcca
ctaggtccagaaggggaagaggctgccccattgctgttggggccccagctatgccagggc
ctcatgcccagtctccttcatgacccaatggtcctcctggcccgcctgcatttgctgtgc
ctactttgtgctgacgatgaggaagaggagaaaggccagcttcagggcccacagtggttc
ctgcaggagctgctggctggcctacagcaaagggcagccctggacggtggtccccgagcc
ttggccactctctgtttccaggcctcataccttgttaccagctgcctgactagacgaccc
gcagtccggacagccttgatccatggactggcccaactgtaccgagctcggccttccctg
gctccccactttgtggacctcttagatcaggtaaaccctgagctgagagagcccctcagg
gaggtgctgctccaagaggtggtagccaggccaggcaagaacgaagcactttgctggcac
ctgcagatgctggcaaaggtggcagagggagccactcagagtgccaccctcggctttcta
caggctgcagctgtacactgcactgactggggcctacagcaggccctactgcgagtgtgc
cgtgctctgctgcggacaggtgggggagatggcctggcagacctgctgcagaaactggcc
agacaactagagaatgctgatggacgagaccatgcccgactctactatgtcctcttgtcc
catctgtcaagttccaagctggggatggcgctgggtccctcactggctgcacctgcactg
gcctcatcactgatggctgagaaccagggcttcgcgtcagcactgatggtgcaggagacc
tcagctccagttcagttgagtgtggggcctcggaaggccaagggcccactccctgtgctg
tacctgcaggtgcaggcgctgggtgctcctgtctactctctggagctgcgcttccgtgtg
gagggacaggtctacaagcctttggaggctgtccacattccctgcttgcgtccgggacaa
cctgcccattctctgtacctgcccttgcagccccgatgcccagcccctgcccgcctacac
gtccgggccctttacagcacacctgctggcctcacatgccatgcccacctgccacccctg
tctgtgacctttgctgacctcttcctgcctttccccgagctccctaagggctctgagttg
tgtttctttgatgagctctggaactcctgtctgccaaagggtgtggaaagtcgtgtgtgg
tgtccactcgggccacagggtctggaggccttggtgtcccaacacctagagccctttgta
gtggtggctcagccccctaccacctacctcatagctgtccgcctgccccctgactccatg
ctgctgctgcggctggagaaggctcaggtggacggtgtgcccgtggccctaaggacagat
gactgggccgtgctgcccctggtaggggactacctccgtgggctggcagcccactga
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