Arvicanthis niloticus (African grass rat): 117699412
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Entry
117699412 CDS
T08817
Symbol
Zc3h12c
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117699412 (Zc3h12c)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117699412 (Zc3h12c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
DUF3723
Motif
Other DBs
NCBI-GeneID:
117699412
NCBI-ProteinID:
XP_034347215
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MAAEKTLQEYGVLCIQEYRKSSEVESSARNRFMGLKDHVGHDLGHLYMESTDPQLSAAVP
WPMVEKPTMDTVRAGKEEKGLSEENVSSGDSEESTTSDHESEQLRSLSVEPFLLTKTHRQ
LCRSPCVESHLLKHSDVLQDFKLEESQTPSKEVKKPPDVVREYQTKLEFALKLGYSEEQV
QLVLNKLGTDALINDILGELVKLGNKSEADQTVSTINSVMRETSSLESQRSESPMQEMVT
DDGENLRPVVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLERGHKDITVFVPAWRKEQSRP
DALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDL
ANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYG
KKCTYGHKCKYYHPERGSQPQRSVADELRAMSRNTAAKTTNEGGLVKSNSVPCSTKADST
SDVKRGAPKRQSDPSIRTHVYQDIEEKLPTKNKLETRSVPSLVSIPATSTAKPQSTTSLS
NGLPSAVLFPPQDQRPQGQYPPMMMATKNHGTPMPYEQYPKCDSPVDVGYYSMLNAYSNL
SISGPRSPERRFSLDTDYRVNSVASDCSSDGSMSCGSSDSYVGYNDRSYVSSPDPQLEES
LKCQHMHPHSRLNSQPFLQNFHDPLTRVQSYSHEEPKFHPKRPLPHLAMHLQHPAVGARS
SCPGDYPSPPSSAHSKAPHLGRALVATRIDSISDSRLYDSSPSRQRKPYSRQEGLGSWDR
PNYGMDAYGYRQTYSLPDNSTPPCYESITFQSLPEQQEPTWRIPYCGNPHDPPRYQDSRE
KIYINLCNIFPPDLVRLVMKRNPHVTDAQQLAAAILVEKSQLGY
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggagaagacactgcaggaatacggggtactttgcattcaagaatacaggaaa
agcagcgaagtggagtcaagtgcccggaacaggttcatgggcttgaaggatcacgtgggg
catgaccttggccacctttatatggagagcactgacccacagctaagtgcagctgtgcct
tggcccatggtagagaaaccaacaatggatacagtcagggcagggaaggaagaaaagggg
ctgtctgaagagaatgtgagctctggtgactctgaggaaagcacgacttctgatcatgag
tcagaacaactgaggagcctttcagtagagccgttcttattaaccaagactcacagacag
ttatgtcgctctccctgtgtagagtctcacctgctgaaacacagtgacgttttgcaagac
tttaaattagaagagtcccagactccatccaaggaagtgaagaaaccccctgatgtggtt
cgagaataccaaacaaaactggagtttgcacttaagttaggttattctgaagaacaggtc
cagcttgtgctaaacaaacttggtactgatgctttaatcaatgatatattgggagaactt
gtcaaacttggaaataaaagtgaagctgatcaaacggttagtactattaacagcgtgatg
cgggaaacatcatccctggaatctcagaggtcggaatctccaatgcaagaaatggtaaca
gatgatggtgaaaatctgagaccagtagttattgatggcagcaatgtggcaatgagccat
ggaaacaaagaagtattctcgtgccgaggaataaaattggcagtggattggtttttggaa
agaggccacaaagatataacggtctttgttcctgcttggagaaaagaacagtcccgacct
gacgccctcatcacagatcaggaaattttacgtaaactagagaaggaaaaaatcctggta
ttcacaccatcacggcgtgtccagggcaggcgagtggtatgctatgacgacaggttcatc
gtgaagctggcttttgagtctgatggtataattgtgtccaatgataactacagagacttg
gcaaatgaaaaaccagaatggaagaagttcatagatgaacggttattgatgtattccttt
gtcaatgacaagttcatgcccccagatgaccctcttggcagacatggcccaagtctggat
aattttctgaggaagaaacccattgttcctgagcacaaaaagcagccttgtccctacgga
aagaagtgtacgtatggacacaagtgcaaatactaccacccggaaaggggcagtcagcct
cagcgttcagtggctgatgaacttcgtgccatgtctagaaacacagcagccaaaactaca
aatgaagggggactggtgaaaagcaacagtgttccttgcagcaccaaggctgatagcact
tcggacgttaaacgaggtgctccaaagaggcagtcagacccaagcataaggactcacgtc
taccaagacatagaggaaaagcttcccaccaaaaacaagttggaaaccaggtctgtacct
tccttagttagtatcccggccacgtccactgcaaaaccccaaagcactacatctttaagc
aatggccttccatctgcagttctcttcccacctcaggatcaaagaccacagggacagtac
cctccaatgatgatggcaaccaaaaatcatggaacgccaatgccttatgaacagtatcca
aaatgtgactcccctgttgacgttggatattactccatgttgaatgcatattctaatctg
agtatctcaggcccccgaagtcctgaaaggcgtttctcattagacactgactatagagta
aattctgtagcttcagactgcagcagtgacgggagcatgagctgtgggagcagcgactcg
tatgtggggtacaatgaccggtcctacgtcagctctcctgacccacagctggaagagagt
ctcaagtgtcagcacatgcaccctcacagccgccttaattcccaacccttcctgcagaat
ttccatgatcccttaaccagagtccagagttacagtcatgaagaaccaaagttccatccc
aagcgtcctcttccacacttggctatgcacctgcagcaccccgccgtgggtgcccgctcc
agctgtcctggcgattacccctctccaccaagttcagcacattctaaggcaccacaccta
ggaagggccttagtggccacgagaatagacagcatttctgattctcgactctatgatagt
tctccttcaagacaaagaaagccttattctcgccaggaaggcctgggaagctgggatagg
ccaaactatgggatggatgcatatggctatcggcagacttactccttaccggataattcc
acacccccgtgctatgagtcgatcaccttccagagcctgcctgagcagcaggagcccacc
tggagaatcccctactgtggaaatccacatgatcctccgaggtaccaggacagccgagag
aagatttatatcaatttgtgcaacatcttcccccctgaccttgtaaggctcgtcatgaaa
aggaatcctcacgtgacagatgcccagcagcttgccgcagccatcttagtggagaaatcg
cagctgggttattga
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