Arvicanthis niloticus (African grass rat): 117699431
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Entry
117699431 CDS
T08817
Symbol
Ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
anu03009
]
117699431 (Ddx10)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117699431 (Ddx10)
Ribosome biogenesis [BR:
anu03009
]
Eukaryotic type
90S particles
Helicases
117699431 (Ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
117699431
NCBI-ProteinID:
XP_034347227
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MGKTVGSLGQGTRPDPVRSFNRWKKKHSHRQHQKKERRKQLKKPEWQVEREGISRLMQNY
DKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKT
LAFLVPVLEALYRLQWTSMDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKD
LKHEAERINNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAII
ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQK
ISVLFSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNE
FVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILL
PSEEQGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSV
YLMKDKEVFNVNKLPITEYALSLGLAVAPRIRFLQKMEKQPTKELVKNHQLTEAVQPRVP
SLTNDEVEEFRAYFSEKMSILHKSGEGLEETEHRLASDDSEEQDEETEDEAHLGKAREPH
TESLLSIEEAQKVKEVPVQFLDRDEEEEEDGPDADFLTVKRRDVFGLDLKENEALSKKEP
SKSSVKKKLTKVAEAKKVMKRSFKVNKKITFTDEGELVQQWPQIQKCATRDEEEEDDTGG
INLDKAKERLQEEDKFDKEEYRKKIKAKHRERRLKEREARREANKRQAKAKDEEEAFLDW
SDEDDGGFDPSTLPDPDKHRSSEESESEDTKHRMSDTKKKQELRKRNNTEVDDGRPRSHG
KKAKWEAPEPLDTGLSLAEDEELVLHLLRSQS
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaacggttggttctctgggtcagggaaccagacccgacccggtgcggagcttc
aatcgctggaagaaaaaacacagccacaggcagcaccaaaagaaggagcggaggaagcaa
cttaagaagccggaatggcaggtcgagcgtgaggggatcagccgcctcatgcaaaactac
gataagataaatgtaaatgaaattacaagattttcagattttcctttgtccaagaaaaca
ttgaaaggtttgcaagaagcacagtaccgcttggtaactgagatacagaagcagaccata
gggttggctttgcaaggtaaagatgtgcttggcgctgccaaaactggatctggcaagact
ttggcttttcttgttccagtattggaagccttataccgtctgcagtggacttcaatggac
ggcctgggagttctgataatatcacctactcgagaactggcctatcagacatttgaggtt
ctacgcaaagtagggaagaatcatgatttttcagccggtctcatcattggtggaaaggat
ctgaaacatgaagctgagaggatcaacaatataaatatactcgtttgcacgcctggtcga
cttcttcaacacatggacgaaacaatatgttttcatgccaccaatcttcaaatgttagtt
cttgatgaagcagatagaatcttggatatgggctttgctgataccatgaatgctattatt
gaaaatcttcccaagaaacgccagactttactgttctcagccacacagaccaaatctgta
aaggaccttgcacgcttgagtttgaaagaccctgagtatgtctgggttcacgagaaagca
aaatacagtacccctgctacattggaacagaactatataatttgtgagctgcaccaaaaa
ataagtgtgctgttttcctttttgagaagccacctaaagaagaagagtattgtatttttc
tccagttgcaaagaggttcagtatctgtacagggtgttctgccggctgcgcccaggggtc
tctatccttgctctccatggccggcaacagcagatgagaaggatggaagtctacaatgag
tttgtccgaaagagggctgcagtactttttgctactgacattgcagccaggggactggat
tttccagctgtgaattgggtccttcagtttgattgtccagaggatgccaacacatatatt
cacagagctggtagaactgccaggtacaaagaggatggagaagctttattaattttacta
ccctcagaagagcaagggatggtgcagcagcttctccagaagaaagtacctgtgaaggag
atcaaaatcaatccagaaaaactcattgatgttcagaaaaaattagaatcatttttagct
caagatcaagatttaaaagaaagagctcaaaggtgttttgtctcctacatacgttcagtg
tatcttatgaaggataaagaagtatttaatgtgaacaagttacctattaccgaatatgca
ctgtctcttggtcttgctgtggcaccacggataagatttcttcagaaaatggagaaacag
cccaccaaagaattggtaaagaatcatcaactcaccgaagcagttcagcccagggttccc
tccctcaccaacgatgaggtagaagaatttcgggcttatttcagtgagaaaatgtccatc
cttcacaaaagtggggaaggactagaagagacagaacacagattggctagtgacgatagt
gaagaacaggatgaagagacggaagatgaagctcacctgggaaaagcaagagagcctcac
actgagtctcttctcagtattgaggaggcacagaaggtcaaggaagttcccgtgcagttc
ttagatagagatgaagaagaagaagaagatgggcctgatgctgacttcctcacagtgaaa
cggcgtgatgtgtttgggttggatcttaaagagaatgaagcactgtcgaaaaaagaacct
tctaaatccagtgtcaagaaaaaattaaccaaagttgcagaagcaaaaaaagtaatgaag
agaagttttaaagtgaacaagaaaataacatttactgatgaaggggagttggttcaacag
tggccacagattcagaaatgtgctacaagagatgaggaggaagaagatgacactggtggt
atcaacctggacaaagcaaaggaaaggcttcaggaagaggataaatttgacaaagaagaa
tataggaagaaaattaaggcaaagcatcgggaaagacgcctaaaagaaagagaggccaga
agagaagccaacaaaagacaagcaaaggccaaagatgaagaggaagcctttctggactgg
agtgatgaagatgatggtggatttgatccaagcacacttccagatccagataagcacaga
agttctgaagaatcggagagtgaagatacaaaacataggatgagtgacaccaagaagaag
caggaactgaggaagagaaacaacactgaagtcgatgatggaagaccaagaagtcatgga
aagaaggccaagtgggaggcgccagagccgttggatacaggcctgtctttagcagaggac
gaggagctggtgctgcacctcctcagaagtcaaagctaa
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