Arvicanthis niloticus (African grass rat): 117699485
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Entry
117699485 CDS
T08817
Symbol
Hcn4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04024
cAMP signaling pathway
anu04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
117699485 (Hcn4)
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
117699485 (Hcn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117699485 (Hcn4)
Ion channels [BR:
anu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
117699485 (Hcn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
117699485
NCBI-ProteinID:
XP_034347295
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MDKLPPSMRKRLYSLPQQVGAKAWIMDEEEDGEDEGAGGRQDPSRRSIRLRPLPSPSPSV
AAGCSESRGAALGATDSEGPGRSAGKSSTNGDCRRFRGSLASLGSRGGGSGGAGGGSSLG
HLHDSAEERRLIAAEGDASPGEDRTPPGLATEPERPGAAAQPAASPPPQQPPQPASASCE
QPSADTAIKVEGGAAASDQILPEAEVRLGQSGFMQRQFGAMLQPGVNKFSLRMFGSQKAV
EREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIVFNV
VSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFVVDFISSIPVDYIFLIVE
TRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVN
LIGMMLLLCHWDGCLQFLVPMLQDFPHDCWVSINGMVNNSWGKQYSYALFKAMSHMLCIG
YGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSF
HKLPPDTRQRIHDYYEHRYQGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANAD
PNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGE
ICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKNSI
LLHKVQHDLNSGVFNYQENEIIQQIVRHDREMAHCAHRVQAAASATPTPTPVIWTPLIQA
PLQAAAATTSVAIALTHHPRLPAAIFRPPPGPGLGNLGAGQTPRHPRRLQSLIPSALGSA
SPASSPSQVDTPSSSSFHIQQLAGFSAPPGLSPLLPSSSSSPPPGACGSPAAPTPSTSAA
ATTTGFGHFHKALGGSLSSSDSPLLTPLQPGARSPQAAQPPPPLPGARGGLGLLEHFLPP
PPSSRSPSSSPGQLGQPPGELSPGLAAGPPSTPETPPRPERPSFMAGASGGASPVAFTPR
GGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLTQD
LKLISASQPALPQDGAQTLRRASPHSSGESVAAFSLYPRAGGGSGSSGGLGPPGRPYGAI
PGQHVTLPRKTSSGSLPPPLSLFGARAASSGGPPLTAAPQREPGARSEPVRSKLPSNL
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctgccgccgtccatgcgcaagcggctctacagccttccgcagcaggtgggg
gccaaggcgtggatcatggacgaggaagaggatggtgaggatgagggggccgggggccgc
caagacccgagccgaaggagcatccgattgcggccgctgccatcgccctcgccctcggtg
gccgctggctgctcggagtcccggggtgcggccctcggggcgacagacagcgaggggccg
ggccgcagcgccggcaagtccagcaccaacggtgactgcaggcgcttccgcgggagtctg
gcctcgctgggcagccggggcggcggcagtggtggagcagggggcggcagcagtctcggg
cacctgcatgactccgcggaggaacggcggctcatcgccgctgagggcgatgcgtccccc
ggcgaggacaggacgcccccgggcctggcgaccgagcccgagcgcccgggcgccgcggca
cagcccgcagcctcgccgccgccccagcagccgccgcagccggcctctgcctcttgcgag
cagccctcggcggacacggctatcaaagtggagggaggcgcggccgccagcgaccagatc
ctccccgaggccgaggtgcgcctgggccagagcggcttcatgcagcgccagttcggtgcc
atgctgcaacctggggtcaacaaattctccctaaggatgttcggcagccagaaagcggtg
gaacgcgagcaggagagggttaagtcagctgggttttggattatccacccgtacagtgac
ttcagattttactgggacctgacgatgctgttgctgatggtggggaatctgatcatcatc
cccgtgggcatcaccttcttcaaggatgagaacaccaccccctggatcgtcttcaacgtg
gtgtcagacacgttcttcctcattgacttggtcctcaacttccgcacggggattgtggtg
gaggacaacacagaaatcatccttgacccccagaggattaagatgaagtacctgaaaagc
tggtttgtggtagatttcatctcctccatccccgtcgactacatcttcctcatagtggag
actcgcattgactcagaggtctacaaaaccgccagggctctgcgtatcgtccgcttcact
aagatcctcagcctcctgcgcctcttacgactttcccgcctcatccgatatattcatcag
tgggaagagatcttccacatgacctatgacctggccagtgccgtggttcgcattgtcaac
ctcatcggtatgatgcttctgctctgccactgggatggatgcctgcagttcctggtgccc
atgctgcaggacttcccccatgactgctgggtgtccatcaatggcatggtgaacaactcc
tgggggaagcagtattcctacgccctcttcaaggccatgagccacatgctgtgtattggg
tacggacggcaggcaccggtaggcatgtctgacgtctggctcaccatgctcagtatgatc
gtgggcgccacctgctatgccatgttcatcggtcacgccaccgccctcatccagtccctg
gactcctcccggcgccagtaccaggagaagtacaaacaggtagagcagtacatgtccttc
cacaagctcccgcctgacacccggcagcgtatccatgactactacgaacaccgctatcag
ggcaagatgtttgatgaggaaagcatcttgggtgagctgagcgagccacttcgagaggag
atcatcaactttaactgccggaagctggtggcctccatgccactgtttgccaatgcagat
cccaacttcgtgacgtccatgttgaccaagttgcgttttgaggtcttccagcctggggat
tacatcatccgcgaaggcaccatcggcaagaagatgtactttatccagcacggcgtggtc
agtgtgctcactaagggcaacaaggagaccaagctggctgatggctcctattttggagag
atctgcttgctgacccggggccgtcgcacagccagcgtgagggcggatacttactgccgc
ctctactcactgagcgtggacaacttcaatgaggtgctggaggagtatcccatgatgcgg
agggccttcgagacggttgcgctggaccgcctggaccgcataggcaagaagaactccatc
ctcctccacaaggtgcagcacgacctcaactcaggcgtcttcaactaccaggagaacgag
atcatccagcagatcgtgcggcatgaccgtgagatggcccactgtgctcaccgcgtccag
gctgccgcctcggccaccccaacccccacgcctgtcatatggaccccgctgatccaggcg
ccactgcaggctgctgctgctactacttcggtggccatagccctcacacaccacccccgc
ctgcccgccgccatcttccggcctcctcccggacctgggctgggcaaccttggggctgga
cagacaccgaggcacccaaggaggctgcagtccttgatcccttcagcgctgggctctgct
tcaccagccagcagcccctcacaggtggacaccccgtcttcatcctccttccacatccaa
cagctggctggattctctgcacctcccggattgagccctctcctgccttcctctagctct
tccccacctccaggagcctgcggttcccccgctgccccgacaccatccacctccgctgct
gccaccaccactgggttcggccactttcacaaggcgctaggtggctccctgtcatcctct
gactccccgctgctcaccccactgcaaccaggcgctcgctctccacaggctgcccagccg
ccacccccactgcctggggcccgaggaggcctgggactcctggagcacttcttgccgccc
ccaccctcctccaggtcaccatcatccagccctgggcagctcggccagcctcctggagag
ttgtccccaggtctagcagctggtccaccaagtacaccagagacacccccacggcctgaa
cggccatccttcatggcaggggcctctgggggggcttctcctgtagcctttaccccccga
ggaggcctcagccctccgggccacagcccgggccccccaagaactttcccgagtgcccca
ccccgggcctctggctcccatggttccctgctcctgccacctgcatccagtcctccacct
ccccaggtcccacagcgcaggggcacaccacccctcacccccggccgcctcacacaggac
ctgaagctcatctcagcctctcagccagcccttccccaggatggggcccagactctccgc
agggcctcgcctcactcctcaggggagtcggtggctgccttctcactctatcccagagct
gggggtggcagcgggagcagtgggggccttgggcctcccggaaggccatatggtgccatc
ccaggccagcatgtcactttgcctcggaagacatcctcaggttctttgccacccccactt
tctttgtttggggcaagagccgcctcttctggagggcctcctctgactgctgcaccccag
agggaacctggcgctaggtctgagccagtacgctccaaactgccgtctaatttatga
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integrated database retrieval system
