Arvicanthis niloticus (African grass rat): 117699519
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Entry
117699519 CDS
T08817
Symbol
Cspg4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
anu00535
]
117699519 (Cspg4)
04091 Lectins [BR:
anu04091
]
117699519 (Cspg4)
Proteoglycans [BR:
anu00535
]
Cell surface proteoglycans
Others
117699519 (Cspg4)
Lectins [BR:
anu04091
]
C-Type lectins
Others
117699519 (Cspg4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
117699519
NCBI-ProteinID:
XP_034347339
LinkDB
All DBs
Position
Unknown
AA seq
2326 aa
AA seq
DB search
MLPGPGHPLSAPALALAFTLALLVRSTAPASFFGENYLEVPVPSALTRVDLLLQFSTSQP
EALLLLAAGQADHLLLQLHSGRLQVRLALGQEELRLQTPADTVLSDSAPHTVVLTVSDSW
VVLSVDGVLNTSSPIPRASHLKATYGLFVGSSGSLDLPYLKGISRPLRGCLHSAILNGRN
LLRPLTPDVREGCAEEFSAGDEVGLGFSGPHSLAAFAAWSTREEGTLEFTLTTRSQQAPL
AFQAGDQRGNFIYVDIFEGHLRAVVEKGQGTMLLRNSVPVADGQPHEVSVHIDVHRLEIS
VDQYPTRTFNRGVLSYLEPRGSLLLGGLDTEASRHLQEHRLGLTQGAANISLVGCIEDFS
VNGRRQGLREAWLTRDMTAGCRPEEDEYEEEVYGPYETFSTLAPEAWPAMELPEPCIPEP
GLPAIFANFTQLLTISPLVVAEGGTAWLEWRHVQPTLDLTEAELRKSQVLFSVSQSARHG
ELELDIPGAQTRKMFTLLDVVNRKARFVHDGSEDTSDQLMLEVSVTARAPVPSCLRRGQI
YILPIQVNPVNDPPRIIFPHGSLMVILEHTQKPLGPEIFQAYDPDSACEGLTIQLLGVSS
GVPVEHRDQPGEPATEFSCRELEAGNIVYVHRGGPAQDLTFRVSDGMQASAPATLKVVAV
RPAIQILHNTGLHLAQGSAAAILPANLSVETNAVGQDVSVLFRVTGPLQFGELQKQGAGG
VEGTEWWETLAFHQRDVEQGRVRYLSTDPQHHTRDTVEDLTLEVQVGQETLSNLSFPVTI
QRATVWMLRLEPLHTQNPHQETLTPAHLEASLEEEEEGGPYPHTFHYELVQAPRRGNLLL
QGTRLSDGQSFSQNDLQAGRVTYRATTRTSEAADDSFRFRVTSPPHFSPLYTFPIHIGGD
PNAPVLTNALLTVPEGGEGVLSADHLFVKSLNSASYLYEVMEQPHHGRLAWRDPKGKATP
VTSFTNEDLLHGRLVYQHDDSETTEDDIPFVATRQGEGSGDMAWEEVRGVFRVAIQPVND
HAPVQTVSRVFHVARGGQRLLTTDDVAFSDADSGFNDAQLVLTRKDLLFGSIVAMEEPTR
PIYRFTQEDLRKKQVLFVHSGADHGWLQLQVSDGQHQATAMLEVQASEPYLHIANGSNLV
VPQGGQGTIDTAVLHLDTNLDIRSGNEVHYHVTAGPHWGQLLRDGQSVTSFSQRDLLDGA
ILYSHNGSLSPQDTLALSVAAGPVQTNTILQVTIALEGPLAPLQLVQHKKIYVFQGEAAE
IRRDQLEVVQEAVLPADIMFSLRSPPNAGYLVMVSHGASADGPPSLDPVQRFSQEAVNSG
RVLYLHSRPGAWSDSFSLDVASGLGDPLEGVLVELEVLPTVIPLDVQNFSVPEGGTRTLA
PPLVQITGPYFPTLPGLVLQVLEPPQHGALQKEDQPQDGSLNTFSWREVKEQLIRYVHDG
SETQTDSFVLLANASEMDRQSQPVAFTVTILPVNDQPPVLTTNTGLQIWEGAIVPIPPEA
LRGTDNDSGPEDLIYTIQQPSNGQIALRGAPDTEVHRFTQAQLDSGLVLFSHRGALEGGF
HFDLSDGAHTSPGHFFRVLAQKQVLLSLEGSRKLTVCPESVQPLSSQSLSASSSTGTDPR
HLLYRVVRGPQLGRLLHAQQGSAEEALVNFTQAEVNAGNILYEHEMSSEPFWEAHDTIAL
LLSSPPARDLAATLAVMVSFDAACPQRPSRLWRNRGLWVPEGQRAKITVAALDAANLLAS
VPASQRGRHDVFFQITQFPTRGQLLVSEEPLHAGRPHFLQSQLAAGQLVYAHGGGGTQQD
GFRFRAHLQGPMGASVAGPQTSEAFVITVRDVNERPPQPQASIPLRVTRGSRAPVSRAQL
SVVDPDSAPGEIEYEVQRAPHNGFLSLTGDNTGPVTHFTQADVDAGRLAFVANGSSVAGI
FQLSMSDGASPPIPMSLTIDVLPSTIEVQLRAPLEVPQALGRSSLSRQQLQVISDREEPD
VVYRLTQGPLYGQLLVGGKPASAFSQLQVDQGDVVFAFTNFSSSQDHFKVLALARGVNAS
ATVNVTVQALLHVRAGEPWPQGATLRLDPTVLDASELANRTGSMPHFRLLAGPRYGRVIR
VSQGRTESRSNRLVEHFTQQDLEEGRLGLEVGRPEGRSTGPTGDRLTLELWARGVPPAVA
LLDFATEPYHAAKSYSVVLLSVPEAARTETEKPGRSTPTGQPGQAASSPMPAVAKGGFLG
FLEANMFSIIIPVCLVLLLLALILPLLFYLRKRNKTGKHDVQVLTSKPRNGLAGDTETFR
KVEPGQAIPLTTVPGQGPPPGGQPDPELLQFCRTPNPALRNGQYWV
NT seq
6981 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccggcccgggacacccgctgtcagctccagccctggctttggcttttaccttg
gccttgttggtcagatctacagctcctgcctccttcttcggggagaactacctggaggtg
cctgtgccctcagccctgacgagagtggacttgctgctccaattctccacatcccagcct
gaagccctgcttctcttggcagcaggccaagctgaccatctcctgctccagctccactct
ggacgcctacaggtcagacttgccctgggacaagaggagctgaggttgcagacgccagca
gacactgtgctgagtgactccgccccccacactgtagtgctcacagtctccgacagctgg
gttgtgctgtctgttgatggagtgttgaacacctcttcccccatcccaagagcatcccac
ctcaaggccacctatggactctttgtgggctcctctggaagcctggatctgccttacctg
aagggaatcagccgacccctgaggggatgcctccactcagccattctcaatggccgcaac
cttctccgtccgctcacccccgatgttcgtgaaggttgcgctgaagaattctctgctggg
gatgaagtgggcctgggcttctctggaccccactcgctggctgccttcgctgcctggagc
actcgggaggaaggcaccctggagtttacgctcaccactcggagtcagcaagcacccctg
gccttccaagcaggggaccagcgtggcaactttatctacgtggacatatttgagggccac
ttgcgggctgtggttgaaaagggccaaggcaccatgctgcttcgtaacagcgtgccagtg
gctgacgggcagccccacgaggtcagcgtacacatagatgttcaccggctggaaatctct
gtagaccaataccctacgcgtactttcaaccgtggggtcctcagctacctggagccacgt
ggcagtctcctccttggggggctggacacagaggcctctcgccacctccaagaacaccgt
ctgggcctgacacagggggctgccaatatctccctggtaggctgcatagaagatttcagc
gtgaacggcaggaggcagggcctccgggaggcctggctgacccgtgacatgacagcaggc
tgcaggcctgaggaggatgagtatgaggaagaagtctatggcccgtatgaaaccttctcc
accctggcaccagaagcctggccagccatggaactgccagagccatgtattcctgagcca
ggactgcctgctatctttgcaaacttcacccagctgcttaccatcagccccctggtggtg
gccgagggtggcacagcctggcttgagtggcggcacgtgcagcccacgctggacctgaca
gaggcagagctgcgcaagtcccaggtgctgttcagcgtgagccagagcgcacgccacggt
gaactggagctggacatcccgggagcccaaacccggaaaatgtttaccctgttggacgtg
gtgaaccgtaaggcccgctttgttcacgacggctctgaagacacctctgaccagctgatg
ctggaggtctcagtgactgctcgggcacctgtgccctcctgcctgcggaggggccaaatt
tacattctacccattcaggtgaaccctgtcaacgacccacctcgtatcatctttccgcac
ggcagcctcatggtgatcctggaacacacacagaagcctctgggacccgagattttccaa
gcctacgacccagactctgcctgtgagggtctcaccatccagctccttggtgtgtcctct
ggtgtccctgtggaacaccgagaccagcccggagaaccagcaactgagttttcctgtcgg
gaactggaggcaggcaacatcgtgtatgtccaccgtggtgggcctgcacaggacctgaca
ttcagggtcagcgatgggatgcaggccagtgctccagctacactgaaggtcgtggctgtc
cggccggccatacagatcctccacaacacaggactgcacctggcccagggctctgctgca
gccatcttgcctgccaacctgtcagtagaaacgaatgcagtaggacaggatgtgagcgtg
ctgttccgagtcactggccccttgcagttcggggagctgcagaaacagggggccggaggg
gtcgagggcaccgagtggtgggaaacactggccttccaccagcgagatgtggagcaaggc
cgagtgaggtacctgagcactgacccacagcaccacacccgagacacagtggaggacctg
accttggaggtgcaggtgggccaggagaccctgagcaatctgtctttcccagtgaccatc
cagagggccacagtatggatgctgcgccttgagcctctgcacacgcagaatcctcatcag
gagaccctcaccccagcccacctagaggcttccctggaggaggaggaggagggaggccca
taccctcataccttccactatgagttggttcaggcccccaggagaggcaacctcctgctc
cagggtacaaggctctcagatggccagagcttcagccagaatgatctgcaggctggtcgt
gtgacctacagggccacaacaaggacctctgaggcagctgatgactccttccgtttccgg
gtcacatctccgccacatttctccccactctacacgttccccatccacatcggtggcgac
ccgaatgctcctgtcctcactaacgcccttctcacggtacccgagggaggggagggagtg
ctgtctgctgaccacctctttgtcaagagtctcaacagtgccagctacctctatgaagtt
atggagcagccccaccatggcaggctggcttggagggacccaaagggtaaggccacccca
gtgacatccttcactaatgaggacctactgcatggccgactggtctaccagcacgatgac
tctgagaccacagaggatgatatcccctttgtggccacgcgccagggtgagggcagcgga
gacatggcctgggaggaggtgcgtggtgtcttccgagtggccatccagcctgtgaatgac
catgcccctgtgcagaccgtcagccgtgtcttccatgtggcgcggggtggacagcggctg
ctgacgacagacgacgtggccttcagtgatgctgattcaggctttaatgacgcgcaactg
gtgctgacccgcaaggacctcctcttcggcagcatcgtggctatggaggagcccacgagg
cccatctaccgtttcacccaagaggacctcaggaagaagcaagtcctgtttgtacactca
ggagccgaccatggctggctccagctacaggtgtctgacgggcagcaccaggctactgcc
atgctggaggtgcaggcctcagagccttatcttcacatagccaatggttctaatcttgtg
gtccctcagggaggccagggcaccattgacacagctgtgctccacctggacaccaacctg
gatatacgaagtgggaatgaggtccactaccacgtcacagctggccctcactggggacag
ctgctccgggatggccagtcagtcacctccttctcccaacgggacttgctggatggcgcc
attctctacagccacaatggcagcctcagcccccaagacaccctggccctttctgtggca
gcaggaccagtacaaactaataccatcctacaagtgaccattgccctggagggtcccctg
gccccactacaactggtgcagcacaaaaagatctacgtcttccagggggaagcagctgag
atcagaagggaccagctagaggtagttcaggaggcagtgctgcctgccgacatcatgttc
tcgttgagaagccccccgaacgctggctacctggtgatggtatcccacggtgcttcagca
gatggaccgcccagcctggatcctgtgcagagattctcccaggaggcagtgaattcaggc
cgagttctctacctgcactctcgccctggggcctggagtgattccttctccctggacgtg
gcctcgggcctgggcgatcctcttgaaggtgtcttggtggagctggaggtgctgcccaca
gtcatccccctggatgttcaaaacttcagcgttcctgagggtggcacccgtaccctggcc
cctccgctggtccaaatcactgggccttacttccccacactgccaggccttgtcctacag
gtgctagagccaccgcagcacggggccctgcagaaggaggaccaacctcaagatggaagc
ctcaacactttctcctggagagaggtgaaagagcagctgatccgctacgtgcatgatgga
agtgagacgcagacagacagctttgtcctgttggctaatgcctcagagatggatcgccag
agccagcccgtggcctttactgtcaccatcctccctgttaatgaccaaccccctgtcctc
accacaaacacaggcctgcagatctgggagggagccattgtgccaatccctcctgaggcc
ctcaggggaacagacaatgattccgggccggaagacttgatctacaccatccagcagccc
agcaatggacagatagccttgaggggagcaccagacaccgaggtccaccgcttcacacag
gctcagctggacagcgggcttgtgctgttctcacacagaggagccctggaaggaggcttc
cacttcgacctctctgatggcgcgcatacttctcctggacatttcttccgagtcctggcc
cagaagcaggtgctcctctccttggagggcagccggaagttgaccgtctgtccagagtct
gtgcagccactcagcagccagagcctgagtgccagttccagcacaggcaccgacccgcgg
cacctgctctaccgggtggtaagaggcccccagcttggccgactcctccatgcccagcaa
ggaagtgcagaggaggccttggtgaacttcacccaggctgaggtgaatgctgggaatatc
ctgtatgagcatgagatgtcctctgagcccttctgggaagcccacgacaccatcgctctc
ctgctgtcctcaccacctgccagggatctggctgccaccctggctgtgatggtgtctttt
gatgctgcctgtccccagcgccccagccgtctgtggaggaacagaggtctttgggtccct
gagggccagcgagccaagatcactgtggctgcccttgacgccgccaacctcctagccagt
gtgccagcatctcagcgcggtcggcatgatgtgttcttccagatcacacagttccccacc
cggggtcagctcctggtgtccgaggagccacttcatgccgggaggccccacttcctgcaa
tcccagctggctgcgggacagctggtgtatgcccatggtggtgggggcacccagcaggat
ggcttccgcttccgtgcccacctccagggaccaatgggggcttctgtggcaggaccccaa
acctctgaggcctttgtcatcactgtgagggacgtgaatgagcggccccctcagccacag
gcctccattcctctccgtgtcaccaggggctcacgagcccctgtctcacgagcccagctg
agtgtagtcgacccagattcggctccaggggaaattgagtatgaagtacagagggcaccc
cacaatggcttcctgagcctgactggggacaacactgggcctgtgacgcacttcacacag
gccgatgtggatgcaggacgtctggccttcgtggccaacgggagcagtgtggctggcatc
ttccagttgagcatgtctgatggagccagccccccaatacccatgtccctgactatagat
gtcttgccatccaccattgaagtgcagctgcgagcacccctggaggtgccccaagctcta
ggacgttcctccctgagccggcagcagctccaggtgatttcggatcgtgaggagccagat
gtagtttaccgcctcactcaggggcccctgtacgggcagctactagttggggggaagccc
gcctcagccttcagccagctgcaggtagaccagggggatgtggtctttgccttcaccaac
ttctcttcctctcaggatcacttcaaagtcctggctctggccaggggtgtaaatgcatca
gccaccgtaaatgtcacagtacaggctctgttgcatgtgcgggccggtgagccatggcct
cagggtgccaccctgcgccttgaccccactgtgctggatgccagtgagctggccaaccgc
acaggcagtatgccccacttccggctcttggcaggaccccgatatggccgtgtaatccgt
gtgtcccaaggccgaacagaatctagaagcaaccggcttgtggaacatttcactcagcag
gacctggaagagggaaggctagggctagaggtgggtaggccagagggcaggtccactggc
ccaactggcgacagacttactctggagctgtgggcaaggggtgtcccacctgctgtggcc
ttgctggactttgccactgaaccttatcatgcggccaaatcctacagtgtggtcctactc
agtgtccctgaggctgctcgtaccgaaacagagaaaccaggaagaagcacccccactggc
cagccaggccaagcagcatccagccccatgcccgctgtggccaaaggtggtttcctgggc
ttcttagaagccaacatgttcagcatcatcatccccgtgtgcctggtcctcctgctcctg
gccctcatcttgcctctgctcttctacctccgcaaacgcaacaagacaggcaagcatgat
gtccaggtgttgacctccaaaccccgcaatggcctagctggtgacacagagacctttcga
aaggtagagccaggccaagccattccactcacaactgtgcctggccaggggcccccacca
ggaggccagcctgacccagaactattgcagttttgccggacacccaatcctgccctcagg
aatggccagtactgggtatga
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integrated database retrieval system
