Arvicanthis niloticus (African grass rat): 117699725
Help
Entry
117699725 CDS
T08817
Symbol
Nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
anu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117699725 (Nup54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117699725 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117699725 (Nup54)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117699725 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
117699725
NCBI-ProteinID:
XP_034347463
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MAFNFGAPSGTSGTSTATAAPAGGFAGFGTTTTTAGSAFSFSAPTNTGSAGLLGGTQNKG
FGFGTGFGTTTGTGTGLGTGLGTGLGLGGFNTQQQQQQQQTSLGGLFSQPTQAPAQSNQL
INTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVG
YSCMPNNKDEDGLVVLIFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQ
TEVVIYVVERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLL
QNPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISED
ISELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTI
QGELNAPTQFKGRLNELMSQIRMQNHFGAVKSEEKYYIDADLLREIKQHLKQQQEGLSHL
ISIIKDDLEDIKLVEHGLNETIHSRGGVFS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaattttggggcgccttcgggcacttcaggcacctctacagccaccgcggca
ccggcgggtgggtttgcaggatttggaacaacaactacaactgcaggctctgccttcagc
ttttctgccccaacaaatacaggcagtgcaggccttctcggcggcactcagaacaaaggt
tttggctttggtactggatttggcacgacaacaggaactggcactggtttaggcactggt
ttgggaactggacttggactgggaggatttaacacacagcagcagcagcagcagcagcag
acttctttaggtggtctcttcagtcagcccacacaggctcctgcacagtccaaccagctc
atcaacactgccagcgctctttctgctccaacgctattgggggatgagagagatgccatc
ttggcaaagtggaaccagttgcaggccttctggggaacaggaaaaggatatttcaataat
aacattcctccagtggagtttacacaggaaaatcccttttgccgatttaaggctgtaggt
tatagttgtatgcccaataataaagatgaagatggactagtagttttaattttcaacaaa
aaagaaacagatattagaagccaacaacagcaattggtagaatcattgcataaagttttg
ggaggaaaccagacccttaccgtcaatgtggagggcattaagacactgcctgatgatcag
acggaagttgtcatttatgttgttgagcgttctccaaatggcacctcaagaagagttccg
gcaacaacactgtatgcccactttgagcaagccaacattaagacacagctgcagcagctt
ggggtgaccctctccatgaccaggacagagctgtctcctgctcagatcaagcagctctta
cagaaccctcctgctggtgttgatcctattatttgggagcaggccaaggtggataaccca
gattctgaaaagttaattcctgtaccaatggtgggtttcaaagaattgcttcgaagattg
aaggtccaagatcagatgactaagcagcatcagaccagattagatatcatatctgaagat
attagtgaactgcaaaagaatcaaactacaactatggccaaaatagcccaatacaagagg
aagctgatggatctctcccacagaaccctacaggtcctaatcaaacaggaaatccaaagg
aagagtggatatgcgatccaggctgatgaagagcagttgcgggttcagctagataccatt
caaggggagctgaatgcgcctacccagttcaaaggtcggctgaatgaactgatgtcccag
atcaggatgcagaatcattttggagctgtgaaatctgaagaaaagtattacatagatgca
gacttattacgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccactta
attagcatcataaaagatgacctagaagacataaaactggtagaacatggattgaatgaa
accatccatagcagaggcggtgtctttagctga
DBGET
integrated database retrieval system
