Arvicanthis niloticus (African grass rat): 117699862
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Entry
117699862 CDS
T08817
Symbol
Rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04659
Th17 cell differentiation
anu04710
Circadian rhythm
anu05017
Spinocerebellar ataxia
anu05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
117699862 (Rora)
09159 Environmental adaptation
04710 Circadian rhythm
117699862 (Rora)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
117699862 (Rora)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
117699862 (Rora)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117699862 (Rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
anu03310
]
117699862 (Rora)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117699862 (Rora)
Nuclear receptors [BR:
anu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117699862 (Rora)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117699862
NCBI-ProteinID:
XP_034347658
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All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MYFVIAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCL
IDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQP
GEAEPLTPTYNISANGLTELHDDLSTYMDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDI
NGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQ
QITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLL
KAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLT
EDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVST
LRALCGRHTEKLTAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgtgatcgcagcgatgaaagctcaaattgaaattattccatgcaagatctgt
ggagacaaatcgtcaggaatccattatggtgtcattacgtgtgaaggctgcaagggcttt
ttcaggagaagtcagcaaagcaatgccacctactcctgtcctcgtcagaagaactgtttg
atcgatcggaccagcagaaaccgctgccagcactgtcggctgcagaaatgcctggccgtg
gggatgtctcgagatgctgtcaagtttggccggatgtccaagaagcaacgagacagcttg
tacgccgaggtgcagaagcaccggatgcagcagcagcagcgagaccaccagcagcagcct
ggggaggctgagccactgacgcccacctacaacatctcagccaatgggctgacggaactg
catgatgacctcagcacctacatggacgggcacacccccgagggcagcaaggccgactca
gcagtcagcagcttctacctggacatccagccttccccagaccagtcgggattggacatc
aacgggatcaaaccagaacccatatgtgactacacaccagcatctggcttcttcccctac
tgttccttcaccaatggagagacttccccaaccgtgtccatggcagaactagaacacctt
gcacagaacatatccaaatcccacctggaaacctgccaatacttgcgggaagaactccag
cagataacgtggcagaccttcctgcaggaggagattgagaactaccagaacaagcagaga
gaggtgatgtggcagctgtgtgccatcaagattacagaagctatccagtatgtggtagag
tttgccaaacgcattgatggatttatggagctgtgtcaaaatgatcaaattgtgcttcta
aaagcaggctctctagaggtggtgtttattaggatgtgccgtgcctttgactctcagaac
aacaccgtgtactttgatgggaagtatgctagccctgatgtcttcaaatccttaggttgt
gaagacttcattagctttgtgtttgaatttgggaagagtttgtgttctatgcacctgact
gaagacgaaatcgcattattttctgcctttgtactgatgtcagcggatcgctcgtggctt
caggaaaaggtaaaaatagaaaaactgcaacagaaaattcagctagcccttcagcatgtc
ctacagaagaaccaccgagaagatggaattctaacaaagctaatatgcaaggtgtctacg
ttaagagccctatgtggacgacatacagaaaagcttacggcatttaaagcaatataccca
gacattgtgcgactccattttcctccgttatacaaggaattgttcacttcagaatttgag
ccagcaatgcaaatcgatgggtaa
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