Arvicanthis niloticus (African grass rat): 117700125
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Entry
117700125 CDS
T08817
Symbol
Scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117700125 (Scaf8)
03041 Spliceosome [BR:
anu03041
]
117700125 (Scaf8)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117700125 (Scaf8)
Spliceosome [BR:
anu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117700125 (Scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
DUF3525
Motif
Other DBs
NCBI-GeneID:
117700125
NCBI-ProteinID:
XP_034347866
LinkDB
All DBs
Position
Unknown
AA seq
1269 aa
AA seq
DB search
MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVS
QITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQL
TAAAAAANTLTPLDQGVSFNKKLMDRFDFGEDSEHSEESKKEIPTPQLSHVSESVNNSIF
HQIAEQLQQQNLEQLRQQLLEQQQPQKVTPQDSQEGTFGSEHSASPSQGSSQQHFLEPEA
NLDDSIDIQQQDMDIDEGQDVVEEEIFEPEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRS
GSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPVRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFRALQKLSSGSYKIG
SKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLDGFAEGGMIDQETVNAEWE
TVKASEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPAVSLVPPAFP
VSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPAIPPVVPTSLVQPPL
SMTPETVKDVGFGSLVLPGSSVAGSLAPSTLPAGNVFNPPNKAEPEEKVPHLTEHQIPSG
ENTRPVIPSDIPSSAAMLAQPPGPSSTSGILCVQRPNVSSNSEILGVRPANVSNNAAIMG
AQPPNILNNSGILGIQPPNVSSGSGLLGVLPPNLPNNSGLVGLQPPNVTTNPAGLLGTQP
PIGPQNLPPLTIPAQRMPALPMLDIRPGLIAQAPGPRFPLLQPGIPPQRGIPPPSVLDAA
LHPPPRGPFPPGDLFSQPERPFLAPGRPSIDNVPNPDKRIPLGNDNIQQEGDRDYRFPPL
ETREGITRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPVDMRENLVRPGLDHLGR
RDHFGFPPEKPWGPRDFDEREHRGLPVFGGPKGLHEERGRFRAGSYRFDPRSGPWNRGFG
QEVHRDFDDRRRPWERQRDRDDRDFDFCREINGNRLGRDRIQNTWVPPPHARVFDYFEGA
TSQRKGDNVPQVNGENTERHAQPPPLPVQKDPELYEKLASSGDVDKEESGTVAGVESEAV
VESTETEGT
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaagaccttcaacagcgagttgtattcgctgaatgattataagccaccc
atttctaaagcaaaaatgactcagattacaaaggcagccatcaaagctattaagttctat
aaacacgtggtacaaagtgtcgagaaattcattcagaaatgtaaaccagaatacaaggta
cctggactgtatgttattgactccattgtgcgacaatcccggcatcagtttggtcaagaa
aaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaatttatat
cgttgccctggggatgacaagagtaaaatagtgagagtattaaacttatggcagaagaat
aatgtttttaagagtgagattatccagcctcttctggatatggcggcagggattcctccc
ccagttgtcactcctgttttggccagcaccactgcagctatgagcaacactccaggaaca
cctgtgacacctgttactccagccaatgtggtccaaggcttacctgatccatgggtatcg
cagataacaaacacagacacattggcagctgttgctcagatcctacaaagtcctcaaggt
caacagcttcagcagctaatacaaaccttacagatacagcagcagaagccccagccttct
atcctgcaggccttggatgctggtcttgtggttcagttgcaggcactcacagcacagctt
acagctgcagctgctgcagccaacacacttacgcccttggatcagggagtctctttcaac
aagaagttgatggatagatttgattttggggaagattctgagcatagtgaagaatccaaa
aaggaaattcctactcctcaactctctcacgtttctgagtctgtgaacaactccatcttt
catcagatagcagagcagctgcagcagcagaacctggagcagttgcggcagcagctcctg
gagcagcagcagcctcagaaggtaactcctcaggacagccaggaaggaacatttgggtct
gagcactcagcttcaccctcacaagggagtagccagcagcatttcctggaacctgaagca
aatttagatgattccatagacattcagcaacaggatatggatattgatgaagggcaggat
gttgttgaagaggagatctttgaaccagaagctaagaaagtagctgttcgctcaagatca
agaactcattcacgatctcgatcaaggtcaccaagaaaacgaaggtctaggtcacgctct
gggtcccgaaagcgaaagcacaggaagcgttctcgctctcgctcaagagagagaaagaga
aaatcctcacgttcctattcaagtgaacgcagagccagggaaagggagaaagaacgccaa
aaaaagggcttgcctcctgtcagatcgaaaacactaagtgtatgcagcactactctctgg
gttggccaagtggacaagaaggctacacagcaagacttaaccaacctttttgaggagttt
ggacaaattgaatccattaatatgattccacccaggggctgtgcatatgtctgtatggtt
catcgacaagattcatttcgggctcttcagaaactgagttcaggatcctataaaattggt
tctaaggtcattaagattgcctgggctttgaacaaaggtgtaaagactgaatacaaacag
ttctgggacgtggatcttggagtcacatatataccctgggaaaaagttaaagtagatgac
ttggatggctttgcagagggaggcatgattgatcaggaaactgtaaatgctgaatgggaa
actgtgaaagcctcagaacctgttaaagagacggtccagactacacagagtcctactcca
gttgaaaaggagacagtggtcacaacccaggccgaggttttccctcctcctgttgccatg
ctgcagattcccgtagcaccagccgttcctgcagttagcttagttccaccagcgtttcct
gtgtcgatgcctgtcccccctcctggattcagcccaatccctccacctccttttctacga
gcaagttttaacccttcacaaccacctcctggttttatgccacctccagttcccccacct
gtggtacctccccctgcaatcccacctgtagtaccaacatctttagtgcaaccaccattg
tccatgaccccagaaactgtgaaagatgtgggatttggcagcctggttttaccgggcagt
tctgttgctggcagtctggctccttcaactctaccagctgggaatgtttttaatcctccc
aataaagcagagcctgaagagaaagtacctcaccttacagaacaccagattccttctggt
gagaataccagaccagtgattccaagtgatattccaagtagcgctgcaatgttagcacag
ccgcctgggccctcaagcacctctgggatcctgtgtgtgcagagaccaaatgtatcaagt
aattctgaaattctgggggttcgtccagctaatgtttccaacaatgctgcgattatggga
gcccagccaccaaatattctaaataactctggaattttgggcatacagccaccaaatgta
tctagtggctctggacttctcggggtactgcctccaaacttgcctaacaactctggactt
gtgggactacagccaccaaatgttacaacaaatcctgctggactgttgggaacacagcca
ccaattggacctcagaacttaccccccttaaccatccctgctcaaaggatgcctgcactg
ccaatgctagacattcgtcctggactgatagcacaggctcccgggccaagattcccttta
ctccagcctggaattccaccacaacggggtatccctcccccatcggtacttgatgcagct
cttcatcctccaccccgtggaccttttcctccaggagatcttttcagtcagccagaaaga
ccttttctggctcctggaagaccaagtatagacaatgttcccaacccagataaaagaata
ccacttgggaatgacaatattcagcaggaaggggatagagattaccgctttcctcctcta
gaaaccagggagggcattactagacctcctccagtggatgttagggatgtggttgggcga
cctatagatcccagagaaggccctggaaggcctccgttagatggtagggatcattttgga
agacctcctgtggacatgagagagaatcttgtgaggccaggtctagaccaccttggtcga
agagaccactttggctttcccccagagaagccttgggggcctagagattttgatgagaga
gagcatcgaggtctgcctgtctttggtggcccaaaaggcttacatgaagaaagaggtaga
tttcgggctggaagttaccgatttgatcctagaagtggtccttggaacagaggatttgga
caagaagttcacagagattttgatgaccgcagaagaccctgggagaggcagagggatagg
gatgacagagattttgatttctgcagagaaattaatggaaatcgtcttggacgagataga
attcaaaacacttgggttcctcctcctcatgctcgggtttttgattattttgaaggggcc
acttctcaacggaaaggtgataatgtgcctcaagttaatggtgaaaatacagagagacat
gctcagccaccgcctttaccagtacagaaggaccctgaactctatgagaaactggcgtct
tcaggtgacgtagacaaggaggagagcggcacagttgctggtgtagagagtgaagcggtg
gtagaaagcacagagactgaggggacataa
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integrated database retrieval system
