Arvicanthis niloticus (African grass rat): 117700513
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Entry
117700513 CDS
T08817
Symbol
Npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117700513 (Npas1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117700513 (Npas1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
HLH
PAS_4
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
117700513
NCBI-ProteinID:
XP_034348294
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MATPYPRSGGRGEVKCGGGRGAGVPWDFLPGLMVKAPPGPCLQAQRKEKSRNAARWRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAVGPPAGLA
PGRRGPVALVSEIFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGS
SVFDYIHPGDHSEVLEQLGLRAATTGPPTPPSVSSSSSSSSSSSLVDTPEIEASPTEASP
AFRVQERSFFVRMKSTLTKRGLNVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLAEL
PLHGHMIVFRLSLGLTILACESRVSDHMDMGPSELVGRSCYQFVHGQDVTRIRQSHLDLL
DKGQVVTGYYRWLQRAGGFVWLQSVATVAGNGKSAGEHHVLWVSHVLSHAEGGQTPLDAF
QLPAIVSQEEPSSPGPEPTEEEPPVDRKQAVPVEQDKDKDPQARGKRIKVEASPKDARGS
EDSGEEELSDPPAPPRPEFTSVIRAGALKHDPVLPWGLTTPGDPSPALLHAGFLPPVVRG
LCTPGTIRYGPAELSLMYPHLHRLGPGPSLPEAFYPTLGLPYPGPTGTRVQRKGD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccatatcccagaagcggtggccgaggtgaagtcaagtgcgggggcggccgt
ggagctggcgtcccctgggatttcctgcccgggctgatggtcaaggccccgcccggaccc
tgcctgcaggcgcagcgcaaagagaagtcccgcaacgcagcgcgctggcggcgcgggaag
gaaaatctcgagttcttcgagctggccaagctgctccctctgcccggtgccatctccagc
cagctggacaaggcgtccatcgtgcgtcttagcgtcacctacctccgcctgcgtcgtttt
gccgcgctgggggcgccgccctgggggttgcgggctgtcgggcctccggctggcctcgcc
ccaggccgccgaggccctgtggctctggtctctgaaatcttcgagcaacacctgggtgga
cacatcctacagtccttggatggcttcgtgtttgccttgaaccaggaaggaaaattcctc
tacatctcagagacagtgtccatctatctgggtctctcacaggtggagctgacgggcagc
agcgtcttcgactacatccatcctggggaccactcggaggtactagagcaactgggattg
cgggctgcaaccaccggtccccctacgccgccttccgtgtcctcctcttcctcctcctcg
tcttcctcctcgctggtggacacccccgagattgaagccagccccaccgaggcatcccct
gccttccgggtccaggaacggtccttctttgttcgaatgaagtccaccctcactaagaga
ggcctgaatgtcaaagcctcggggtacaaggttattcatgtgacagggcgcctgagggcc
cgagccctaggtcttgtagcccttggacacacgcttcccccagccccactggctgagctg
cctctgcacggacacatgatcgtcttccgcctcagtctgggcctcaccatccttgcttgt
gagagcagagttagcgaccatatggacatgggaccctcagaactcgtgggacgaagctgc
taccagtttgtccatggacaggatgtaaccaggatccgccaaagccatctggacctgctg
gacaaagggcaggtggtgactggttactaccgttggctgcagcgtgcggggggcttcgtg
tggctgcagtctgtagccactgtggccgggaacgggaagagtgctggggaacatcacgtg
ctgtgggtcagtcacgtgctcagccatgctgaaggtggtcaaacacccctggatgccttc
cagcttccagccattgtgtctcaggaggagccatccagcccaggcccagagcccacagag
gaagaacctccagttgaccggaagcaggctgtgcctgtggagcaggacaaggacaaggac
cctcaggcccgaggcaaacgcatcaaagtggaggccagcccgaaggacgctagaggctca
gaggacagtggcgaggaggagctctcagatccacccgctccacctcggccagaattcact
tctgtcatccgggcaggggccctgaaacatgatccagtactgccatggggcttgacaact
cctggagacccctcacctgcactccttcatgcaggcttcctgccacccgttgtgcgaggc
ctgtgtaccccaggcaccatccgctatggccctgcagagttgagcctgatgtatccacat
ctgcacaggctgggtccaggcccctcgcttccagaggctttttaccctacgctgggcctg
ccctatccggggcccactggtactagggtgcagcggaaaggagactga
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