Arvicanthis niloticus (African grass rat): 117700973
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Entry
117700973 CDS
T08817
Symbol
Cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117700973 (Cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117700973 (Cnot3)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117700973 (Cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117700973 (Cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
117700973
NCBI-ProteinID:
XP_034348669
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPTYPSGPPPATSALSSTPGNNGASTPAAPPSALGPKASP
APSHNSGTPAPYAQAVAPPNASGPSNAQPRPPSAQPSGGSGGGSGGSSSNSNSGTGGGAG
KQNGATSYSSVVADSPAEVALSSSGGSSASSQALGPTSGPHNPAPSTSKESSTAAPSGAG
SVASGSGNNSGGPSLLVPLPVNPPSSPTPSFSEAKAAGTLLNGPPQFSTTPEIKAPEPLS
SLKSMAERAAISSGIEDPVPTLHLTDRDIILSSTSAPPTSSQPPLQLSEVNIPLSLGVCP
LGPVSLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVE
FYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQ
GTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgaa
ggcgtggagcagtttgaagatatttggcaaaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcgtccaatgagatcaaggacaaaaggcagcttattgaaaac
cgcaagctcattgaaacgcaaatggaacggttcaaagttgtggaacgagagaccaaaacc
aaagcttatagcaaggagggtctgggtctggctcagaaggtggaccctgcccagaaggag
aaggaagaggttggccagtggctcacgaacaccattgacaccttaaatatgcaggtggac
cagtttgagagtgaggtggagtcactgtcggtacagacacgcaagaagaaaggcgacaag
gatcagaagcaggaccggatcgagggcttgaagcggcacatcgagaagcaccgttaccat
gtgcgtatgctggagaccatcctgcgcatgctggacaacgactccatcctggttgacgcc
atccgcaagatcaaggacgatgtggagtactacgtggactcatcccaggaccccgacttc
gaagagaacgaattcctctatgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagccacatggaggatgagatcttcaaccagtcgagcagt
acacccacctccacaacctccagctctcccatcccacccagcccagccaactgcactacg
gaaaactctgaagatgataagaagagaggccgttcgacagatagtgaagtcagccagtct
ccagccaaaaatggctccaagcctgtccacagcaaccagcatccccagtccccagctgtg
ccgcccacctacccctctggccccccacctgccacttctgccttgagctccacccctggc
aacaatggggcctctaccccagcagcacctccaagtgccctgggccctaaggccagtcca
gctcccagccacaactcgggtactcctgccccctatgcccaggctgtggccccacccaat
gccagcgggcccagcaatgcccagccccgaccccccagtgcccagccgagcgggggaagt
ggtggtggcagcggagggagcagcagcaatagtaacagtggcacaggcggaggggctggc
aagcagaacggtgccaccagctatagttcagttgtggcagatagccctgcagaggtggcc
ctgagtagcagtgggggcagcagtgccagcagccaagccctggggcccacttcaggccct
cacaacccagctcccagcacctcaaaggaatccagtacggcagccccatcgggggccggg
agtgtggcttcaggctcagggaacaactcagggggacccagcctcttggtgccactacct
gtaaatccccccagttctccaacgcccagcttcagtgaagccaaggcagctggcaccctg
ctcaatggtcctccacagttcagtaccaccccagaaatcaaggcccctgaacctctgagc
tctctgaaatccatggcagaacgggcagctatcagctctggtattgaggaccctgtgcca
acgttacacctaactgatcgagacatcattctgagcagcacatcagcaccacccacctca
tcccagccacccctgcagctgtcagaggtgaacataccattgtcactgggcgtctgtcca
ctggggccagtgtccctcaccaaggagcagctataccaacaggccatggaagaggccgcc
tggcaccacatgccccacccctctgactccgagcgcattcggcaatacctcccccggaac
ccttgcccgacacccccctaccaccaccagatgccacccccacactcggacactgtggag
ttctaccagcgcctgtcaactgagacgctcttcttcatcttctactatctggagggaacc
aaggcacagtacttggcagccaaggccctaaagaagcagtcctggcgattccacaccaag
tatatgatgtggttccagaggcacgaggagcccaagaccatcacagatgagtttgagcag
ggcacctacatctactttgactacgagaagtggggccagcggaagaaggaaggcttcacc
tttgagtaccgctacctggaggaccgggacctccagtga
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