Arvicanthis niloticus (African grass rat): 117702149
Help
Entry
117702149 CDS
T08817
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117702149
Spliceosome [BR:
anu03041
]
Common components
Common spliceosomal components
General mRNP proteins
117702149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
117702149
NCBI-ProteinID:
XP_034349335
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELEKTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAATSVQPLATQCF
QLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHTYVDKNSAQGNVYVKCPSIAAAIA
AVNALHGRWFAGKMITAVYVPLPTYHNLFPDSMTATQVLVPSRR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggccccttacaagaaggatgagaac
aagttgaacagtgctaacggccatgaagaacgtagcaaaaagagaaaaaaaagcaagagc
agaagtcgtagtcatgagagaaaaagaagcaaaagtaaagaacggaaacgaagtcgagat
agagaaaggaaaaagagcaaaagccgagagcggaaacgaagtagaagcaaagaacggaga
cgaagccgctcacgaagtcgagatagaagattccgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacgttcccgaagcaaaagtccattcaggaaagacaagagccctgtgagggaa
cctattgataatctcactcctgaggaaagagatgcaaggacagttttctgcatgcaactg
gcagcaagaattcgaccaagagatttggaagaatttttctctacagtaggaaaggttcga
gatgtaagaatgatttctgatagaaattcaagacgttccaaaggaattgcctatgtggaa
tttgttgatgtcagttcagtgcctctagcaattggattaactggccaacgagttttagga
gtgccaatcatagtacaggcatcacaggcagaaaaaaacagagctgctgcaatggcaaac
aatttacaaaagggaagtgctggacctatgaggctctacgtgggctcgttgcactttaac
ataactgaagatatgcttcgggggatctttgaaccttttggaaggattgaaagtattcag
ctcatgatggatagtgaaactggtcgatctaagggatatggattcattacattttctgat
tcagaatgtgccaaaaaggctttggaacagcttaatggatttgagttagctgggagacca
atgaaagttggacatgttactgaacgaactgatgcttctagtgctagttcatttttggac
agtgatgaactagaaaagactggaattgacttgggaacaactggacgtctccagttaatg
gcaagacttgcagagggtaccggtttgcagattccaccagcagcacagcaagctttacaa
atgagtggctctttggcatttggtgctgtggcagatttgcaaacacgactttcccaacag
actgaagcctcagctttagctgcagctacatctgttcaacctcttgccacacagtgtttc
caactttccaacatgtttaatcctcaaacagaagaagaagttggatgggatacagagatt
aaagatgatgtcattgaagaatgtaataaacatggaggagtcattcatacttatgttgac
aaaaattcagctcagggcaatgtgtatgtgaagtgcccatctattgctgcagctattgct
gctgtcaatgcattgcatggcaggtggtttgctggtaaaatgataacagcagtgtatgta
cctcttccaacttaccacaacctctttcctgattctatgacagcaacacaagtactggtt
ccaagtagacgatga
DBGET
integrated database retrieval system
