Arvicanthis niloticus (African grass rat): 117702325
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Entry
117702325 CDS
T08817
Symbol
Itgb6
Name
(RefSeq) integrin beta-6
KO
K06589
integrin beta 6
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04151
PI3K-Akt signaling pathway
anu04510
Focal adhesion
anu04512
ECM-receptor interaction
anu04810
Regulation of actin cytoskeleton
anu04820
Cytoskeleton in muscle cells
anu05165
Human papillomavirus infection
anu05410
Hypertrophic cardiomyopathy
anu05412
Arrhythmogenic right ventricular cardiomyopathy
anu05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117702325 (Itgb6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117702325 (Itgb6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117702325 (Itgb6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117702325 (Itgb6)
04810 Regulation of actin cytoskeleton
117702325 (Itgb6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
117702325 (Itgb6)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
117702325 (Itgb6)
05412 Arrhythmogenic right ventricular cardiomyopathy
117702325 (Itgb6)
05414 Dilated cardiomyopathy
117702325 (Itgb6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117702325 (Itgb6)
04515 Cell adhesion molecules [BR:
anu04515
]
117702325 (Itgb6)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117702325 (Itgb6)
Cell adhesion molecules [BR:
anu04515
]
Integrins
Integrin beta subunits
117702325 (Itgb6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
117702325
NCBI-ProteinID:
XP_034349430
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Position
2:complement(36826916..36945619)
Genome browser
AA seq
787 aa
AA seq
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MGIELVCLFLLLLGRNDHVQGGCAWGGAETCSDCLLTGPHCAWCSQENFTHLSGAGVRCD
TPVNLLAKGCQLPFIENPVSQVEVLQNKPLSVGRQKNSSDIVQIAPQSLVLKLRPGGEQT
LQVQVRQTEDYPVDLYYLMDLSASMDDDLNTIKELGSRLAKEMSKLTSNFRLGFGSFVEK
PVSPFMKTTPEEITNPCSSIPYFCLPTFGFKHILPLTDDAERFNEIVRKQKISANIDTPE
GGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDHRNE
YSMSTVLEYPTIGQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNI
LQLIISAYEELRSEVELEVLGDTEGLNLSFTAICNNGIIFPHQKKCSHMKVGDTASFNVT
VSISNCEKRSRNLIIKPVGLGDTLEILVSAECDCDCQREVEANSSKCHNGNGSFQCGVCA
CNPGHMGPHCECSEDTVSTDSCKESPGHPSCSGRGDCYCGQCVCHLSPYGSIYGPYCQCD
NFSCLRHKGLLCGDNGDCDCGECVCRDGWTGEYCNCTTSRDSCASEDGVLCSGRGDCVCG
KCVCRNPGASGPTCERCPTCGDPCNSKRSCIECYLSADGQAQEECEDKCKATGATISEED
FSKDASVSCSLQGENECLITFLITTDNEGKTIIHNINEKDCPKPPNIPMIMLGVSLAILL
IGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTYKHREKHK
AGLSSDG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggggattgagctggtctgcctgttcctgctacttctaggaaggaatgatcacgtccaa
ggtggctgtgcctggggtggtgcagaaacctgctcagactgcctgctcacaggaccgcac
tgcgcctggtgctcccaggagaatttcacccacctgtccggagctggcgtaaggtgtgac
accccagtgaatcttttagccaaaggatgccaattacccttcatcgaaaaccctgtatcc
caagtagaagtacttcaaaataagcctctcagcgtaggtcgacagaaaaatagttctgac
attgttcagattgctcctcaaagcttggttcttaagttgagaccagggggtgagcagact
ctgcaagtgcaggtccgccagacggaagattacccagtagatctatattacctcatggac
ctctcggcctccatggatgacgacctaaacacaatcaaagagcttggctcccggcttgct
aaagagatgtctaaattaaccagcaactttagattgggctttggctcttttgtggaaaag
cctgtttctccttttatgaaaacaacaccagaggaaatcaccaacccttgcagtagtatt
ccctatttctgcttacccacgtttggattcaagcacattttgccattgactgatgatgcc
gagagattcaatgaaattgtgaggaaacagaagatttctgctaatattgacacacctgaa
ggcggatttgatgcaatcatgcaggctgctgtgtgtaaggaaaagattggctggcgcaac
gactcgctccacctcctggtctttgtgagtgatgcggattctcattttggaatggacagc
aagctagcaggcattgtcattcccaacgatgggctctgtcacttggaccacaggaatgaa
tactccatgtcaactgtcttggagtatccaactattggccagctcattgataaactggta
caaaacaacgtgctactgatctttgcggttactcaagaacaagtccatctgtatgagaat
tatgcaaaactcattcctggagcgaccgtgggactccttcagaaggattctgggaacatt
cttcagctgatcatctctgcttacgaagaactgcggtctgaggtggaactggaagtatta
ggggacacagaaggactcaacctgtctttcacagctatctgtaacaatggcatcatcttc
ccacaccaaaagaaatgttcccatatgaaagtcggagacacagcatccttcaatgtgact
gtgagcatatccaactgcgagaaacgaagcaggaaccttatcataaagcctgtggggctg
ggggacaccctggaaatactcgtcagtgcagaatgtgactgtgactgccagagagaagta
gaagccaacagttctaagtgccacaatgggaatggctccttccagtgtggggtgtgtgcc
tgcaaccctggccacatgggtcctcactgcgagtgcagcgaggatacggtgagcacagat
tcctgcaaggagtctccaggtcacccctcatgcagcggaaggggtgactgctattgtggg
cagtgcgtctgccacttgtctccctatggaagcatctacggaccctactgccagtgcgac
aacttctcctgtctgagacacaaaggcctactctgcggagataacggtgactgtgactgt
ggcgaatgcgtgtgccgggatggctggacaggcgagtactgcaactgtacaaccagcagg
gactcatgtgcatctgaggatggagtgctatgcagtgggcgtggggactgtgtctgtggc
aagtgtgtctgcagaaacccgggagcctcaggacccacctgtgaacgctgtcctacctgt
ggcgacccctgtaactctaaacggagctgcatcgagtgctacctgtctgcagatggccag
gcccaagaagagtgcgaagacaagtgcaaagccactggtgccaccatcagtgaggaagat
ttttcaaaggatgcttctgtctcgtgctctctacaaggagaaaatgaatgccttattaca
ttcctaataactacagataatgaagggaaaaccatcattcacaacatcaatgaaaaagac
tgccccaaacctccaaacattcccatgatcatgttgggggtgtcgctggctatcctgctc
atcggtgttgtgctactgtgcatttggaagctgctggtatcatttcacgaccggaaagaa
gtggctaaatttgaagcagaacgatctaaggccaagtggcaaacgggaaccaatccgttg
tacagaggctccaccagcacttttaagaacgtgacctacaagcacagggagaagcacaaa
gcaggcctttcctcagatgggtag
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