Arvicanthis niloticus (African grass rat): 117702594
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Entry
117702594 CDS
T08817
Symbol
Sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04210
Apoptosis
anu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117702594 (Sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117702594 (Sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117702594 (Sptan1)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117702594 (Sptan1)
Intermediate filaments
Intermediate filament-binding proteins
117702594 (Sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
SCO1-SenC
Tetrabrachion
Motif
Other DBs
NCBI-GeneID:
117702594
NCBI-ProteinID:
XP_034349583
LinkDB
All DBs
Position
2:7176247..7242703
Genome browser
AA seq
2477 aa
AA seq
DB search
MDPSGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWI
QEKLQVASDENYKDPTNLQGKLQKHQAFEAEVQANAGAIVKLDETGNLMISEGHFASETI
RTRLMELHRQWELLLEKMREKGIKLLQAQKLVQYLRECEDVMDWINDKEAIVTSEELGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQFAAKLIQEQHPEEELIKTKQDEVNAAWQRL
KGLALQRQGKLFGAAEVQRFNRDVDETIGWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVKALCAEADRLQQSHPLSANQIQVKREELITNWEQIRTRAAERHARLDDS
YRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKSA
DESGQALLTAGHYASDEVREKLSILSEERTALLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
MEDVATRRDALLSRRNALHERAMNRRAQLADSFHLQQFFRDSDELKSWVNEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVNHYAKEEVAARMNEVISLW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQDAGHFDAENIKKKQEALVARYEALKEPMVARKQKL
ADSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRI
KAVTQKGNAMVEEGHFAAEDVKAKLSELNQKWEALKAKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALREQAQSCRQQV
APMDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPAQSASRENLLEEQGSIALRQGQIDNQTRITKEAGSVSLRMKQVEELYQSLLELG
EKRKGMLEKSCKKFMLFREANELQQWINEKEAALTSEEVGADLEQVEVLQKKFDDFQKDL
KANESRLKDINKVAEDLESEGLMAEEVQAVQQQEVYGMMPRDEADSKTASPWKSARLMVH
TVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKEWIEEKNQALNTDN
YGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAQRLIQSHPESAEDLKEKCTELNQA
WTSLGKRADQRKAKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLER
HQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERTDLEKAWVQRRMM
LDHCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEK
IAALQAFADQLIAVDHYAKGDIANRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDV
DEIEAWISEKLQTASDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDMGNS
LIERGACAGSEDAVKARLAALADQWQFLVQKSAEKSQKLKEANKQQNFNTGIKDFDFWLS
EVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQASSLMTSSAFDTSQV
KEKRDAINGRFQKIKSMATSRRAKLSESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRD
LTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGQEEIQQRLAQFVEHWKEL
KQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAF
ETDFTVHKDRVNDVCTNGQDLIKKNNHHEENISSKMKALNGKVSDLEKAAAQRKAKLEEN
SAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGIAN
ITALKDQLLAAKHIQSKAIEARHASLMKRWTQLLANSATRKKKLLEAQSHFRKVEDLFLT
FAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSAQADFNQLAELDR
QIKSFRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHAN
AFHQWIQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEA
LILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHF
DKDKSGRLNHQEFRSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGHVSLQEYMAFM
ISRETENVKSSEEIESAFRALSSEGKPYVTKEELYQNLTREQADYCVSHMKPYVDGKGRE
LPTAFDYVEFTRSLFVN
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagtggggtcaaagtgctggaaacagccgaggacatccaggagagacggcaa
caggtcctggaccggtaccaccgcttcaaggagctctctaccttgcggcgacaaaagctg
gaggattcctatcgattccagttttttcaaagagatgctgaggagttggagaagtggatt
caggagaagcttcaagttgcatctgatgagaactacaaagacccaaccaacttgcaggga
aagctccagaagcaccaagcttttgaagctgaagtgcaggccaacgcaggagccattgtg
aagctggatgagacaggaaacttgatgatttctgaaggacactttgcatctgaaaccatc
cggacacgtttaatggagctacaccgccagtgggagctgcttttggagaagatgcgggag
aagggaatcaaactgctgcaggcacagaagctggtgcagtacttgcgggagtgtgaggat
gtgatggactggatcaatgacaaggaagcaattgtgacttctgaggagctgggccaggac
ctggagcatgtagaggtactacagaagaaatttgaagagtttcagactgatctggctgct
catgaagaaagagttaatgaagtaaaccagtttgctgccaaacttatccaggagcagcac
cctgaagaggagctgatcaagaccaagcaggatgaggtgaatgcagcttggcagcgacta
aaaggcctggctcttcaaaggcaggggaagctgttcggtgctgctgaggtccagcgcttt
aacagggatgtagatgagaccattggctggattaaggagaaagagcagttaatggcctct
gatgactttggcagagacttagcaagtgtccaagctctgctccggaagcatgagggtctg
gagagagatctcgccgctctagaggacaaggtgaaagccctgtgtgccgaggctgaccgt
ctgcaacagtcacaccctctgagtgccaaccagatccaggtgaaacgagaggagctgatt
accaactgggagcagatccgaactcgggcagcagagagacatgcacggcttgatgactca
tacaggcttcagcgcttccttgctgattttcgtgacctcacgagctgggtgactgaaatg
aaagccctcatcaatgcagatgaactagccaatgatgtggctggtgctgaagccctgctg
gacaggcatcaagagcacaagggtgagatcgatgctcatgaagatagctttaagtctgca
gacgagtctgggcaggctctgctcactgctggtcactatgcctcagatgaagtgagggag
aagctgagcatcctctctgaggagagaactgccctgctggaactgtgggagcttcggagg
cagcagtatgaacagtgcatggacttgcagctcttctaccgtgacaccgagcaggtggac
aactggatgagcaagcaggaggcatttctgctaaatgaagatttgggtgactccttagac
agtgtggaagctcttttgaagaagcatgaggactttgagaaatctctcagtgcccaggaa
gaaaaaatcacagcccttgatgaatttgcaaccaaactcatccaaaataaccactatgca
atggaagatgtagccactcgtcgagatgctctcctgagccgccgtaatgcccttcatgag
cgagccatgaatcgccgggcacagctggccgattccttccacctgcagcagttcttccgt
gattctgatgagctcaaaagttgggtcaacgagaagatgaaaacggccactgacgaagct
tataaagatccatccaacctgcaagggaaagtccaaaagcatcaggcttttgaggctgag
ctctcagcaaaccagagccgtattgatgccctagagaaagctgggcaaaagctgatagat
gtcaaccactatgccaaggaagaagttgcagctcgtatgaatgaggtcatcagtttgtgg
aagaaacttctagaggccacagaactgaaaggaataaagcttcgtgaagccaaccagcag
caacaatttaatcgcaatgttgaggacattgaattgtggctgtatgaagttgaaggtcac
ttggcttcagacgattatggtaaagacctcactaatgtccagaacctccagaagaagcat
gctctgctagaggcagatgttgctgctcaccaggatcgaattgacggcatcacaattcag
gcccgccagttccaagatgctggtcatttcgatgctgaaaacattaagaagaagcaagag
gcccttgtggctcgctatgaggctctcaaagaacccatggtggcccggaagcagaagctg
gcagattctcttcgtctgcagcagcttttccgagatgtggaggatgaggaaacctggatt
cgagaaaaggagcccattgctgcatccactaacagaggcaaagatcttattggagtccag
aatctgctaaagaaacaccaagctttacaagcagaaattgctgggcatgaacctcgcatc
aaagcagtgacacaaaagggaaatgccatggtggaggaaggccattttgctgcagaggat
gtgaaggccaaactgagtgagctcaaccagaagtgggaggctctgaaagccaaagcctcc
cagcggaggcaagatctagaggactcgctgcaggcccagcagtactttgccgatgccaat
gaggctgagtcctggatgcgggagaaggagcccattgtgggcagtacggactacgggaag
gatgaagactctgctgaggctctactcaagaaacatgaagctctgatgtcagatctcagc
gcctatggcagcagcatccaggctttgcgagagcaggctcagtcatgccggcaacaagtg
gcccccatggatgatgagactggaaaggagctggtcttggctctctatgactatcaagag
aaaagccctcgtgaggtcaccatgaagaaaggggatatcctcaccttgctcaacagcacg
aacaaggattggtggaaagtggaagtgaatgaccgtcagggttttgtgccagctgcatat
gtgaagaagctggaccccgcccagtcagcctcgagggagaacctcttggaagagcagggc
agcattgctctgcggcaagggcaaattgacaaccagacacgcataactaaggaggccggc
agtgtatctctgcgtatgaaacaggtggaagaactataccagtctctgctggaactgggt
gagaagaggaaaggcatgttggaaaagagttgcaagaagttcatgttattccgggaagcg
aacgagctacagcagtggatcaacgagaaggaagctgctctgacgagcgaggaggttggc
gctgacttggagcaggttgaggtgctgcagaagaagtttgatgacttccagaaggatctg
aaagccaatgagtctcggctgaaggacattaacaaagtagctgaagacctggagtctgaa
ggtctgatggcagaggaagtgcaggcagtgcagcagcaggaggtgtatggtatgatgccc
agggatgaagcagattccaagacggcctccccatggaagtctgctcgactgatggtccac
acagtggctaccttcaactccatcaaggagctgaatgagcgttggcggtccctgcaacag
ctggctgaggaacgtagccagctcttgggcagtgcacacgaagttcagaggtttcacaga
gatgctgatgaaaccaaagaatggattgaagagaagaatcaggctctgaacacagacaac
tatggccatgatttagctagtgtccaggccctgcagcgcaaacatgaaggctttgagagg
gaccttgcagctcttggtgacaaggtgaattccctcggggaaacagcccagaggctgatc
cagtcccaccccgaatctgcagaggacttaaaggaaaagtgcacagagttaaatcaggcc
tggaccagcctagggaagcgtgcagaccagcgcaaggccaaattgggtgactcccatgac
ctgcagcgcttccttagcgatttccgggacctcatgtcttggatcaatggaatacgaggg
ttggtatcatcagatgaactagccaaggacgtcactggagctgaagctttgctggagcga
caccaggaacaccggacagaaattgatgccagggctggcactttccaggcatttgagcag
tttgggcagcagctgttggctcatgggcactatgccagcccagagatcaaagagaagctt
gatattcttgaccaggagcgcacagacctggagaaggcctgggtccagcgcaggatgatg
ctggaccactgcctggagttgcagctgtttcatcgggactgtgagcaagcagaaaactgg
atggctgcccgggaggccttcctaaacacagaagacaaaggagactcgctggatagtgtg
gaggctctgattaaaaagcatgaagacttcgacaaagctatcaatgtccaggaggaaaag
atagctgccctgcaggcctttgctgaccagctcattgctgtggaccactatgccaaggga
gacatcgcaaaccgacgcaatgaggtcctcgacaggtggcgccgcctaaaagcccagatg
attgagaaaaggtcaaaactcggagaatctcaaacacttcagcagttcagccgggatgtg
gatgagattgaagcctggatcagcgagaagttacagacagccagcgatgagtcatacaag
gaccccaccaacatccagctttccaagctgctgagcaagcaccagaagcaccaagccttt
gaggcagaactgcacgccaatgctgaccgaatccgtggagtaattgatatgggcaactcc
ctcattgagcgtggggcctgtgctggcagtgaggatgctgtcaaggcccgcctggctgcc
cttgcagaccagtggcagttcctggtgcaaaaatcagctgagaagagccagaagctaaaa
gaggccaataagcagcagaacttcaacactggtatcaaagactttgacttctggctctct
gaggtagaggctctcctagcatctgaagattatggcaaagacttggcttctgtgaacaac
ttactgaaaaaacatcaacttctcgaggcagacatatcagcccacgaggaccgtctgaag
gacctgaacagccaggctagcagcttgatgacaagcagtgcctttgacacctcccaagtg
aaagagaaacgggacgccatcaatggacgcttccagaagatcaagagcatggcaacctcc
cgaagagcaaagctgagcgagtcccaccgcctgcaccagttcttccgagacatggatgac
gaggagtcctggatcaaggagaagaagttgttagtgagctctgaggattatggcagagac
ctcactggtgttcagaatctgaggaagaaacacaagaggctagaagccgaactggctgca
cacgaaccagccattcagggtgtcctggacactgggaagaagctgtctgatgacaacacc
atcgggcaggaggagattcagcagcgactcgcacagttcgtggagcactggaaggaactg
aagcagctagcagctgcacgcggccagcggctagaggagtccttggagtatcagcagttt
gtagccaacgtggaagaggaggaggcttggatcaatgagaagatgactctggtggccagt
gaagattatggagatactcttgctgccatccagggtttattgaagaagcacgaagctttt
gagacagacttcactgtccacaaggatcgggtgaatgatgtctgtactaatggacaagac
ctcattaagaagaacaatcaccatgaggagaacatctcttcaaagatgaaggctctgaat
gggaaggtgtctgatctggagaaggcagcagctcagaggaaagcaaagctagaggagaac
tcggccttcctgcagttcaactggaaggctgacgtggtggagtcttggattggtgagaag
gagaacagcttgaaaacagatgactatggccgagatctgtcttctgtccaaactctgctc
actaagcaggagacgtttgacgctggcctgcaggccttccagcaggagggcattgccaat
atcactgccctcaaagaccagctgctagctgccaagcacattcagtctaaggccatcgag
gcccgacatgcctccctcatgaagagatggactcagctgttggccaactcagctacccgg
aagaagaaattgctggaggcccagagtcatttccgtaaggtggaagacctcttcctgacc
tttgccaaaaaggcatcagctttcaacagctggtttgagaacgcagaagaggacctcaca
gacccagtgcgctgcaactctctggaagagatcaaggcccttcgagaggctcacgatgcc
ttccgctcgtccctcagctctgcacaggccgactttaaccagctagccgagctggaccgc
cagatcaagagcttccgggtggcttccaacccctatacctggttcaccatggaagccttg
gaagagacctggagaaacctacagaagatcattaaggagcgagaactggagctgcagaag
gagcagcggcggcaggaggagaatgacaagctgcgccaagaatttgctcagcacgccaac
gcgttccaccagtggatccaggagacaagaacatatctcctcgacgggtcctgcatggtc
gaagagtcaggaactctggaatctcagcttgaagctaccaaacgcaagcaccaggagatt
cgagccatgagaagtcagctgaagaaaattgaggacctgggggctgccatggaggaagcc
ctcatcctggacaacaagtacacagagcacagcaccgtgggcctggcccagcagtgggac
cagttagaccaactgggcatgcgtatgcagcacaatctggagcagcagatccaggccagg
aacacaacaggagtgactgaagaggccctcaaggaattcagcatgatgtttaaacacttc
gacaaggacaagtccggccggctgaaccatcaggagttcagatcctgtcttcgttccctg
ggctacgacttgccaatggttgaggaaggagagcctgatcctgagtttgaggcaattctg
gacactgttgatcccaacagggatggccatgtctccctgcaagaatacatggctttcatg
atcagccgtgaaacagagaatgtcaagtccagtgaagagattgagagcgctttccgggcc
ctcagctctgaaggcaagccttatgtgaccaaggaggagctctaccagaacctgacccgg
gaacaagctgactattgtgtctcccacatgaagccctatgtggatggcaagggccgcgaa
cttccaaccgccttcgactacgtcgagttcacccgctcactcttcgtgaattaa
DBGET
integrated database retrieval system
