Arvicanthis niloticus (African grass rat): 117702723
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Entry
117702723 CDS
T08817
Symbol
Znfx1
Name
(RefSeq) NFX1-type zinc finger-containing protein 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117702723 (Znfx1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
UvrD-helicase
PhoH
DUF4533
IstB_IS21
AAA
nSTAND3
DEAD
AAA_5
GIT1_C
Motif
Other DBs
NCBI-GeneID:
117702723
NCBI-ProteinID:
XP_034349772
LinkDB
All DBs
Position
2:complement(136122316..136146495)
Genome browser
AA seq
1908 aa
AA seq
DB search
MEDRRPHVEARPRNPPPNHRGPVDGEVPPRARNQTNNPAATHHAGRHPRASSHPAPFRQR
EERFRAMGRNPHQGRRNQEGHTGDEARDQRQSQNDTRRRNEDQEGRNHRPPWSNDNFQQW
HTPLQKPAEQPQQTKRLGYKFLESLLQKEPSEVAITLATSLGLKELLSHSSMKPSFLQLI
CQVLRKACSSRIDRQSILHVLGILSNSKFLKVCLPAYVVGMITEPVPDIRNQYPEHINNI
ISLLQDLVSVFPASSVQETSMLVSLLPDSLNALRASGVDIEEETEKNLEKVQAIIKHLQE
KRREGTLRVDTYTLVQAEAEGEVESYRAMPIYPTYNEVHLDERPFLRPNIISGKYESTAV
YLDTHFRLLREDFVRPLREGILKLLQSFEDQGLRKRKFDDIRIYFDARIITPMCSASGIV
YKVQFDTKPLKFVRWQNSKRLLYGSLVCMSKDNFETFLFATVSNREHEDLCQGIVQLCFN
EQSQQLLADVQPSDSFLMVETTAYFEAYRHVLEGLQEIQEEDVPFQRNIVECDSYVREPR
YLLGGGRYDFTPLMENPSAIRKSLRGAEALRRPRINVLDFSQWPSKEDLKLDDSQMEALQ
FALTRELAIIQGPPGTGKTYVGLKIVQALLTNKSVWQINAQKFPILVVCYTNHALDQFLE
GIYGCQKTSIVRVGGRSNSEILKQFTLRELRNKREFRRTLPMHLRRAYMSIVTEMKESEQ
RLQEGAQTLECTMHGVLREQHLEKYISPQHWESLMNGPVQDADWVCVQPSKHSMMLEWLG
LGVGSFTQSASPAGPENIAQAEGEEEEEGEEEGSLIEIAEEADLIQADRVIEEEEVVRPR
RRKKEENGADQELAKMLLAMRLDQDVPGTIAGPEQATEEWETQRSQKKKMKRRVKVELRK
LNTMTEAEASVIQDVWQLDLSSRWQLYRLWLQMYQADTRRKILNYECQYRTWAERMAELR
LQEDLHILKDAEVVGMTTTGAAKYRQILQQVEPQIVIVEEAAEVLEAHTIATLSKACQHL
ILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNHQHRMRPEIARLLTPHI
YKDLENHPSVLKYEQIKGVCSNLFFVEHNFPEQEIQEGKSHQNQHEAHFLVELCQYFLCQ
EYLPSQITILTTYTGQLFCLRKLMPAKTFAGIKVHVVDKYQGEENDIILLSLVRSNQEGK
AGFLQIPNRICVALSRAKKGMFCIGNMEMLAKVPLWSKIIHTLRENKQIGPTLRLCCQNH
PKTHTFVSKAADFQQVPEGGCSLPCEFRLACGHVCTRACHPYDSSHKEFQCMKPCQKVLC
QDGHRCPNVCFQECQPCQVKVPKVILKCGHTQMVPCSMSESDFCCQEPCSKVLRCGHSCS
HLCGEDCVRLCSEKVSVELNCGHSQLVKCGDVENLKYGLPVKCTTKCDTTLDCGHPCPGS
CHSCFEGRFHERCQQPCKRLLVCSHRCQEPCIGECPPCQRTCQNRCVHSQCKKKCGELCS
PCVEPCVWRCQHYQCTKLCSEPCNRPPCYVPCTKLLACGHPCIGLCGEPCPKKCRVCHLE
EVTQIFFGFEDEPDARFVQLEDCSHIFEVQALDRYMNEQKDDEVAIKLKVCPICQVPIRK
NLRYGTSIKQRLEEIEVVKEKLQGSAGEISASQERLTALLKSKTLFHQLRPEEFLLLQEK
LAQKNLSVKDLGLVENSISFYDHLANLEGSLEKVHHVEQQKVRSRLEQVHEWLAKKRLSF
SSQELSDLQSEIQRLTYLVNLLMRCKIAEKVKGSIAEEVSSIRDILEKTSKFTQEDEQLV
QKKMDALKTTLPCSGLGISEEERVQIVTALGVPRGHWFKCPNGHIYVITECGGAMQRSTC
PECQEVIGGENHTLERSNHLAPEMDGAQHPAWSDTANLMNFEEIRRMV
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagacctcatgtagaggccagacccaggaatccccctcccaaccacaga
ggtcctgtagatggagaagtacccccaagagctagaaatcaaaccaataacccagcagcc
acccaccatgctggaaggcatccgagggccagcagccatcctgctcctttccggcagagg
gaagagagatttagggctatgggcaggaacccacatcagggaagaagaaaccaggaaggg
cacactggtgatgaagctagagaccagagacaaagccagaatgacaccaggaggagaaat
gaagaccaggagggtaggaaccaccgaccaccatggtctaacgacaatttccagcagtgg
cacaccccactccagaagccagcagagcagccacagcagacgaaaagactgggctacaag
ttcctggagagcctcctgcagaaggagccctctgaggtggccatcacacttgccacaagc
ctaggtctcaaggagctgctttctcattcctccatgaagcccagcttccttcagctgatc
tgccaagttctccggaaggcttgcagctccaggatcgaccggcagagcatcctgcacgta
ctgggcatcctgagtaactccaagttcctcaaagtctgcctgccggcttatgtggtgggg
atgatcactgagcctgtccctgacattcggaaccagtacccagagcacataaacaacatc
atctccctcctccaggaccttgtcagtgtcttccctgccagctctgtgcaggagacctcc
atgctcgtctctctcctgccagattctcttaatgctttgagagcctctggggttgacata
gaagaggagacagagaagaatttggaaaaggtgcaggccatcattaaacatctgcaggaa
aagaggcgtgagggcactctgagagtggacacctacactctagtgcaggctgaggcagaa
ggcgaggttgagagctaccgggccatgcccatctaccccacctacaatgaggtgcacttg
gatgagaggcccttccttcgccccaacatcatttccgggaagtacgagagcactgctgtc
tacctggacactcacttccgcctcctgcgagaggattttgttaggccccttcgggaaggc
attttgaagctcctacaaagctttgaggaccagggtctgagaaagaggaagtttgatgac
atccgaatctactttgatgctaggatcatcacacccatgtgctcagcatcaggcatcgtg
tacaaagtacagtttgatacaaaaccactcaagtttgttcgctggcagaattccaagcga
ctgctgtatgggtctttagtgtgcatgtccaaggacaactttgagacatttctttttgca
actgtttcaaaccgagagcatgaagatctctgccaaggaatcgtccagctgtgcttcaac
gagcagagccagcagctgcttgcagacgtccaaccctctgactctttcctcatggtagag
acaacagcctactttgaggcttaccggcacgtcctggagggactacaagagatccaggag
gaagatgttcctttccagaggaacattgtggagtgtgactcctatgtgagggagccaagg
tacttgctaggggggggcagatatgatttcacccccctaatggagaatccctcagccatt
aggaagtctctgagaggtgctgaggccttgagacgtcctaggattaatgtcttagacttt
agccaatggccctccaaagaagacctgaagctggatgactcccagatggaagccttacaa
ttcgccctcacaagggagctggctattattcaaggacctcctgggacaggcaagacttac
gtgggtctaaaaatagttcaggctcttctgaccaataagtctgtttggcaaattaatgcc
cagaagttccccatcttggtcgtatgttatactaatcatgctttggaccagtttctagaa
ggcatctacggctgtcagaagaccagcattgtgagagtgggaggaaggagcaacagcgag
atcctgaagcagttcaccctgagggagctgaggaacaagcgggaattccgccgcaccctc
cccatgcacctgcgaagggcctatatgagtattgtgacagagatgaaggagtcagagcaa
agacttcaggaaggggcccagaccctggaatgcaccatgcacggtgtcctccgggagcag
cacctggagaagtacatctctccccagcactgggaaagcctcatgaatggacccgtgcag
gatgctgactgggtctgtgtgcagccctcaaagcattccatgatgctcgaatggctgggg
cttggtgtgggttccttcactcagagtgcatctccagcaggacctgagaacatagcccag
gcagagggggaagaggaggaggaaggggaagaggagggttccctaatcgagattgctgag
gaagccgacctgatccaagcggatcgagtgattgaagaggaagaggtggtgagaccgcgg
agaagaaagaaggaagagaacggggccgaccaggagctggctaagatgctgttggccatg
agactggaccaggatgtgcccgggaccatagctggaccagagcaggctacagaagagtgg
gagacccagcgcagccagaaaaaaaagatgaagaggagagtgaaggtagagcttcgaaaa
ctaaacaccatgactgaagctgaggccagtgtgatccaggatgtctggcagctggacctg
agctctcgctggcagctctataggctgtggctgcagatgtaccaagctgacactcgtcgg
aagatcctcaactatgaatgccagtaccgcacatgggcagaaagaatggccgagctgaga
ctccaggaagaccttcatattctcaaagatgccgaggttgtgggcatgacaaccacaggt
gctgccaagtaccgccagatcttgcagcaagtggagcctcagatcgtcattgtagaagag
gctgctgaggttctcgaggctcacaccattgccacactaagcaaggcttgccagcatctt
attctgattggggaccaccagcagctgcgccccagtgctaatgtgtatgatctggccaag
aacttcaaccttgaggtgtccctgtttgaacggctggtaaaagtgaacatccccttcgtc
cgtctgaatcaccagcaccgtatgcgtcctgagatcgcccgccttttgaccccccacatt
tacaaggatctggagaaccatccttctgttctcaagtatgaacagattaagggtgtctgc
tccaatcttttctttgtggagcacaactttcctgaacaggagatccaagaaggcaaaagt
caccagaaccagcatgaggcacactttctggtggagctgtgccagtacttcctgtgccag
gagtacctgccctcccagatcaccatcctcaccacctacactgggcagctcttctgtttg
cgcaaactcatgcctgccaagacgtttgctggcatcaaggtccatgtggtggacaaatac
caaggggaagagaatgacatcattctcctctcactggtgcggagcaaccaagagggcaaa
gccggcttcctccagatccccaatcgcatctgcgtagccttgtcccgggccaagaagggg
atgttctgcattgggaacatggagatgcttgccaaggtgcccttgtggagcaagatcatc
catacccttcgagagaacaaacagataggcccaaccctccgcctctgttgccagaaccac
cccaagacccacacctttgtatccaaagctgctgacttccagcaagtaccagaaggaggc
tgcagcctgccctgtgagttccggctagcctgtgggcatgtgtgcacacgtgcctgccac
ccatatgactcctcccacaaggagttccagtgcatgaagccatgccagaaagtcctctgc
caggatgggcaccggtgcccaaatgtttgcttccaagagtgtcagccttgtcaggtgaaa
gtacccaaagtcattcttaagtgtggtcacacacagatggtcccttgttcaatgtcagag
tcagatttctgttgccaggagccttgttccaaggtactaagatgtggccacagctgcagc
cacctctgtggtgaggactgtgtacggctgtgttcagaaaaggtctctgtggaacttaac
tgcgggcacagtcaactggtgaagtgtggcgatgtggaaaatctaaaatatggcctgcca
gtcaagtgcaccaccaagtgtgacactaccctagactgtggccacccttgccccggctcc
tgccacagctgttttgaagggcgcttccatgagcgctgtcaacagccgtgtaagcgcttg
cttgtctgctcacacaggtgccaggagccctgtattggtgagtgcccaccctgccagcga
acatgtcagaaccgctgtgtccacagccagtgcaagaagaagtgtggggagctgtgcagc
ccctgcgtggagccctgtgtctggcgctgccagcactaccagtgcaccaaactctgctcg
gagccctgcaaccggcccccatgctatgtgccttgtaccaagctgctggcttgcggccac
ccttgcattggtctgtgtggggagccatgtcccaagaagtgccgtgtgtgccacctggaa
gaggtcacccaaatcttttttggctttgaggatgagcctgatgcccgctttgtgcagctg
gaagactgtagccacatctttgaggtacaagccttggaccgctacatgaatgagcagaag
gatgatgaagttgccatcaaattgaaagtctgccccatctgtcaggtacccatccgcaaa
aacctgaggtatggaaccagcatcaagcagcggctggaagaaatagaagttgtcaaggaa
aagctccagggctctgcaggggagatctcagccagccaggagcgactgacagccctgctc
aagagcaagactctcttccaccagctgcgtcctgaagaattcctgttacttcaagagaag
ctggcccagaaaaacctgtcagtgaaggacctgggccttgtggagaattccatcagcttc
tatgaccacctggccaacctggaggggtccctggaaaaggtgcatcacgtagagcagcag
aaagtgaggtctcgactggaacaggtccacgagtggctggccaagaagcgcctgagcttc
agcagccaggagctgagtgacctccagagtgaaatccagaggctcacctatttggtgaac
ctcctgatgcgctgcaagatagcagagaaggtgaaaggcagcatagcagaagaggtctcc
agcatccgggatattcttgaaaaaacaagtaagttcacccaggaagatgaacagcttgtg
cagaaaaagatggatgctctgaaaaccacccttccctgctctggcctgggcatctctgag
gaggagcgcgtgcagattgtcactgccttgggtgttcctcgtggccattggttcaagtgc
cccaatggccacatctatgtgattactgagtgtgggggagccatgcagaggagtacctgt
cctgagtgccaggaggtgattggtggtgaaaaccatactctggagaggagcaaccacctt
gcccctgagatggatggagcccagcaccctgcgtggtcggacacagccaacttgatgaac
tttgaggagatccgcaggatggtgtag
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