Arvicanthis niloticus (African grass rat): 117702801
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Entry
117702801 CDS
T08817
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117702801 (Chd6)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117702801 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
117702801
NCBI-ProteinID:
XP_034349874
LinkDB
All DBs
Position
2:complement(130215149..130338518)
Genome browser
AA seq
2705 aa
AA seq
DB search
MKMKIQKKEKQLSKLRALNHSPMSDASVNFDYKSPSPFDCSPDQGENIEEAANHCLTQKD
LYTTEEEADTLFSRKLTSHNGMEDSGGRGTGVKKKRKKKEPGEHEGTKGSKDREPKPKRK
REPKEPKEPRRAKEPKRAKEPKEPKPRDGVRKPRKPREGKEKRSCPDYGSRTKSKKASKE
QGPTPVERKKKGKRKSETTVESLELDQSLPNQSLQSPEEPSESADSQKRRSGRQVKRRKY
NEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASKTVQEVH
PGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDE
DLFNPDYIEIDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFE
SLQILPEVKHVERPASDAWQKLETSREYKNSNRLREYQLEGMNWLLFNWYNRKNCILADE
MGLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQ
MIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRN
CKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDLKTEEQ
VKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGAN
QHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAMIQAAGKLVL
IDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCK
PDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRL
ITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDE
EDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWA
KIAELDTEANNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRLSD
KARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWPLNEKDMEMICRALLVYCIKHYKG
DEKIKSFIWELITPSKDGQIQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKNADWLATC
NPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPARELDVLLPDI
DYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLSAEQGVT
DGTSDIPERGNIDKEDSAEDKLDGLQKQTASPSDGSDGIFGEKKDDSQAAQDGSDPDKSP
WPVSSALTARLRRLVTMYQRCNRKELCRPEILGPGNQGYWVQEEVFRRTSEMDLINKEAQ
KRWTRREQADFYRTVSSFGVVYDQEKKAFDWTQFRVISRLDKKSDESLEHYFYSFVAMCR
NVCRLPTWKDDGSPDTSIYVEPITEERAAKTLYRIELLRKVREQVLTCPQLHERLQLCRP
SLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTGTQAPA
SLCCLYQSNSKLYESLTYTPMNRTSESLESEPENLVKMESRDDHICLPEGGLPDITCENF
VSKVQEVISLDHDESLLPESLENMIYGKTGLSQEPRSFQEAPSTNTQSRKNTITISASRD
ESCQPPGIEAEITSASSLMSSLEAGVAKMNIKNGKHLLVSISKEGEPCCSETGRRPESIG
HLEAKCLASPTLDTAHESGFVDLCSLSVYDSKRNFSSDQQLIDLLENKSLENKLILNQSD
EEEEENEDETLAVVASTTEKPKVLDFTKPTANIPRGKNLSFHQDEAKKGRLEVVSKTPGP
QRVFPPSANQCHCKHIERWAHGLGSEESEVEKPKVYQPDLYRSKANNTTVEGEPAIIPTE
PFKLKHELLKEPWKESSEGGKSFSMYVAEGSEPKPEDMDFENKDDYEKDGTCHSHDYPGK
YSEEESKSSASGIAGDLGEEVQEVRAPTIAQLLQEKTLYSFSEWPKDRVIINRLDNICHV
VLKGKWPCSHQYEPSGALPTPVLSNSVASRSSLSEPEAAEHSFSNGAALAAQIQKESFLA
PVFTKDEQKHRHPYEFEVERDAKARSLEEYSATHGRPPIVLNGWHGESAIDLSCSSEGSP
GATSPFPVNASTPKIGAISSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRR
RGRRKHIEGGMDLIFLKEQTLQAGILEVHEDAGQTTLSTTHPEGPGAASSAPEPTATSSS
QAEKAVPSKSLLDWLRQQADYSLDVPGFGASFSDKPKQRRPRCKEPGKLDISSPGGEERV
PAVPKEPGLRGFLPESKFSHTLADPVLRDAGPRRRGRRPRNELLKAPAIVADSPSGMGPL
FMNGLIAGMDLVGLQNVRNIPGIPLTGLVGFPAGFATMPTGEEVKNTLSMLPMMLPGMAT
VPQMFGVGGLLNTPMATTCTTTASASLGSTKSGTSATEKTTEDKLSGHDVKADTLVEDKP
GPSPFSDQSEPTITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMTLPAMQQGRHSDIV
GLETQKRKKKKTKGDNPTPEPASACEREPGSDQNCTESSATVSPEREHVAQAREEGLKDS
NDDTN
NT seq
8118 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaatacagaagaaagagaagcaattgtccaagttaagagctttgaatcac
tccccaatgtcggatgcctctgttaactttgactacaaatctccgtcaccattcgattgc
agtcctgatcagggagagaacatcgaagaagctgccaatcattgtctgacccagaaggac
ttatatactactgaagaggaagctgacacccttttttctaggaaattgacatcccataat
gggatggaggatagtggaggcagaggtactggagtaaagaagaaacggaagaaaaaggag
ccaggggagcatgagggcacaaagggaagtaaggaccgagagcctaagccaaagcggaaa
cgggagcccaaagagccaaaagagcccagaagggccaaggagcccaagagagccaaggag
cccaaggagcccaagccgagagatggtgtgaggaagccccggaagccccgggagggtaaa
gagaagaggagctgccctgattatggatccaggacaaagtccaagaaggccagcaaggaa
caaggaccaaccccagtggagagaaagaagaaaggaaaaaggaaaagtgaaaccaccgtg
gagagtttagagctggaccagagtcttccaaaccaatctctgcagagtcctgaggagccc
agtgagtctgcagacagccagaaacggcgctcaggacggcaagtaaagcgcagaaaatac
aatgaggacctggacttcaaagtggtggatgatgatggggaaacaatcgctgttctagga
gctggccggacatctgcactctcagcttccactctggcctggcaggctgaggagcctcca
gaagatgatgcaaacataattgagaagatcctggcatccaagaccgtccaggaggttcac
ccaggagaacctccattcgacctagagcttttctacgttaagtatagaaatttttcctat
ttgcattgtaaatgggccacaatggaagagctggaaaaggatccccgcatcgcacagaag
atcaaacgctttaggaacaaacaggcccaaatgaagcacatttttactgagcctgatgaa
gacttgtttaatccagattatatagaaattgatcgtatcttagaggtggctcataccaag
gatgcagaaacaggggaggaagtaacacattacctggtaaaatggtgctccctgccatat
gaagaaagcacctgggagctagaagaagatgtggatcctgcaaaagtgaaagaatttgaa
tctctacaaattctccctgaagttaagcacgtggaacgacctgcctctgacgcatggcag
aaactggagacatctcgtgagtataagaacagtaaccggctgagggagtaccagctcgag
gggatgaactggcttcttttcaactggtacaacagaaaaaactgtattttggctgatgaa
atgggcctagggaaaaccatccagtccatcgcattcctttcagaaatctttgtcagggga
atccacggcccctttctcatcattgcccctctttccaccatcactaactgggagcgagaa
ttccggacatggacagagatgaatgctattgtgtatcatggcagccagatcagcaggcag
atgatccagcagtacgagatggtatacagagatgcacagggaaaccccctttcaggagtc
ttcaagttccatgttgtcatcacaacctttgagatgatcctggcagattgcccagagctg
aagaagattcactggagctgtgtgataattgatgaggcccacagactgaagaacaggaac
tgcaaacttctggaagggttaaagctcatggccctggaacacaaagtgctgctcacagga
acacccttgcagaactctgtggaagagctcttcagtttgctaaactttctggagccctca
cagtttccttcagagactgctttcttagaggagtttggcgatctcaaaacagaagaacag
gtaaagaaattacagtctatcctaaaaccaatgatgcttcggcgcctaaaagatgatgtg
gaaaagaaccttgctcctaaacaagagaccatcattgaagtagaactgaccaatatccag
aaaaagtactatcgtgctatcctagagaaaaacttttccttcctaaccaaaggtgcaaat
cagcacaacatgcccaatcttatcaatactatgatggagctgagaaaatgctgtaaccac
ccctacctgatcaatggggcagaggaaaagattctggaagatttcaggaaagcccacagt
tctgaagcctctgacttccagctgcaggccatgatccaagcagcggggaagctggtgctg
attgacaagcttctccccaagctcattgcaggtggccacaaagtgctcatcttctctcag
atggtgcgctgtctcgacatcctggaagattatctcatccagaggagatacacctatgag
cgaattgatgggcgagtacggggaaacctgcgccaggcagccatcgaccgattctgtaag
ccagactcagaccgctttgtctttcttctgtgcaccagagcgggaggtctgggaatcaat
ctcacagctgctgatacttgcatcatatttgattctgattggaacccacaaaatgacttg
caggctcaggcccggtgtcatcgtataggccagagcaaagctgtgaaggtatatcgcctc
atcactcgaaactcctacgagcgggaaatgtttgacaaggccagtctgaagctgggcctg
gacaaggctattcttcaggacatcaacagaaagggcagcaccaatggagtacagcagctc
tcaaaaatggaagtggaggatttgctccggaaaggtgcttatggagctttaatggacgag
gaagacgaaggctccaagttctgtgaagaagatatagaccagattctgcagagaagaacc
cacaccatcaccatccagtcagaagggaaggggtccacttttgctaaggctagttttgtg
gcttcaggaaacagaacagacatttccttggatgatcctaatttttggcagaaatgggct
aaaatagctgaattagacactgaagcaaataatgaaaaggaaagcttagtgattgaccgg
ccacgtgtgaggaagcagaccaaacactacaactcgtttgaggaggacgagctcatggag
ttctcagagttagacagtgactcagatgaaaggcccacaaggtccaggcgcctcagtgac
aaagccagacgctacctccgcgctgagtgcttccgagtagagaagaacctgctcatcttt
ggctggggccggtggaaggacatcctgactcacgggcgattcaagtggcccctgaatgag
aaggatatggagatgatttgccgggccctgctggtgtattgtatcaagcattacaaaggg
gatgaaaaaataaagagttttatttgggaactaatcacaccttccaaagacggacaaatt
cagaccctccagaaccactcaggcttgtctgccccagtccccagagggaggaaaggaaaa
aaaacaaaaaaccagctcttgctcccagaactgaagaatgcagactggctggccacctgt
aatcctgaggtggtcttacatgatgatggatacaagaagcacctcaaacagcactgtaat
aaggtgcttttgagagtccggatgctgtactacctaaaagctgaaatattgggagaagca
gctgataaagcatttgagggaactcctgcaagagaactggatgtgcttctgcctgacatt
gactatgtggagatcccagtggattggtgggatgctgaagctgataagtcccttctcatt
ggtgtgttcaagcacggttatgaaaggtacaatgccatgcgggctgacccagcgctctgc
ttcctggagaaagtcggcatgcctgatgagaagtccctttctgcagagcaaggtgttaca
gatggaacctcagacattcctgaaagaggcaacatagataaagaagacagtgctgaggac
aagttagatggtctccagaagcaaacggcgagtcccagtgatggaagtgatggcattttt
ggtgaaaagaaggatgacagccaggcagcccaggacggctccgacccagacaaatcaccc
tggccagtttcctctgccctcactgctcgactaaggcgtctggtcactatgtaccagcgc
tgcaaccgaaaagagctgtgcagacctgaaatcttaggcccaggtaaccaaggatactgg
gttcaggaggaggtgttcaggagaacttcagaaatggacctcatcaacaaggaagcccaa
aaaaggtggactagaagagagcaagccgacttctacagaacagtgtcttcctttggtgtt
gtatatgaccaagaaaagaaagcctttgactggacacagttccgtgtcatttctcgcttg
gacaagaagtcagatgagagcctggagcactatttttacagttttgtagccatgtgtcgg
aatgtgtgtcgccttcccacgtggaaagatgatggttctcctgataccagcatctatgtt
gaacccatcactgaggagcgggcagcaaagactctgtaccgcattgaactgctgaggaaa
gtccgtgagcaggtgctcacatgtcctcaactacatgagcgcctccagctttgcaggccc
agcctctacctcccagtctggtgggagtgtggaaaacatgatcgtgacctgctcattggc
accgccaaacatgggctcaatcgcactgactattacatcatgaatgaccctcagctatcc
ttcctagatgcctatagaaattatgcccaacacaaaagaactggcacccaggcacctgca
agtctctgttgcctttaccagagcaattctaaactatacgagtctcttacttatacccca
atgaataggacttcagagtctcttgaaagtgagccagagaatctggtaaaaatggaaagc
agggatgaccatatctgcctgcctgagggcggtttacctgacataacatgtgagaacttt
gtttccaaagttcaggaggtcatttctcttgaccatgatgaaagcttgctgcctgagtct
ttggagaacatgatatatggtaagacaggactcagccaagagccgcgttcttttcaggag
gccccaagtaccaacacacagtccaggaaaaatactatcaccatctcagccagcagagat
gagagttgccagcctcctggtattgaggcagaaattacttcagcttcctctcttatgagc
agcttagaagcaggagtagctaagatgaatattaaaaatggtaaacacctgttggtatct
atctcaaaagaaggggagccctgctgcagtgagacaggacggagacctgaaagcataggc
cacctagaggccaaatgcttagcttcccctaccttagatacagcacatgaaagtgggttt
gtagatctctgcagccttagtgtctatgactccaaaagaaacttctcatcagatcagcaa
ctaattgatttgttagaaaacaagagtttagaaaataaattgattttgaatcagagtgat
gaggaagaagaagaaaatgaggacgaaaccttagccgtagtagcaagcaccacagaaaag
ccaaaggtcttagatttcaccaagcccactgcaaacattccaaggggaaagaacctcagc
ttccaccaagatgaagccaagaaaggaaggctggaggtagtaagcaagactcctggacca
cagagggtctttcctccctcagccaatcaatgccactgcaaacacattgaaaggtgggca
catggcctggggagtgaggaatctgaagtagagaaacccaaggtttatcagccagaccta
tacagaagcaaagccaataataccacagtggaaggtgagcctgctattattccaacagag
ccatttaaactgaagcatgagcttttaaaagaaccgtggaaagaaagttcagaggggggg
aagagtttctccatgtatgttgctgagggaagtgaacccaaaccagaagacatggatttt
gagaataaagatgattatgagaaagatggaacctgccacagtcacgactacccaggcaaa
tactctgaggaagagagtaagagttcggcatcaggcattgcaggagaccttggggaagag
gtgcaggaagtacgggctcccaccattgctcagctactacaggagaaaaccctctattcc
ttctcagaatggccaaaggatcgtgtgataattaaccgcctagataatatttgccatgtg
gtgttaaaggggaagtggccctgcagccaccagtatgaaccctcaggtgcactgcccacg
ccagtgttatccaacagtgtagcttctcgaagcagcctctcagagccagaagcagcagaa
cacagcttcagcaatggtgcagcattggcagcccagatccagaaggagagcttcttagcc
ccagtatttacaaaagatgaacaaaagcacagacatccctatgagtttgaggtagaaagg
gatgccaaagctcggagcctcgaagaatactctgccacccatgggcgtccccccattgtc
ctcaatggctggcatggggagtcagctatagatctctcctgctcatcagaagggtctcca
ggagccacatctcctttcccagtgaatgccagcacccctaaaattggtgctatcagttca
cttcaaggagcccttggtatggacttgtctggaattctgcaagctggcctgatccaccca
gtgactggacagatcgtcaatggaagcctcaggcgggatgatgctgccatgagaaggcgg
agagggaggcgaaaacatattgaaggagggatggacctcatctttctgaaggagcaaaca
cttcaggctggaatcttggaagtccatgaagatgcagggcagactaccctgagcaccaca
caccctgaagggccaggagctgcttcctcagctcctgagccaacagcaacatccagcagc
caggctgagaaagctgtacccagcaagagcctacttgactggctgaggcagcaggctgac
tactctttggatgttcctggctttggggcaagtttttcagacaaacccaagcagaggaga
ccacgctgcaaagaacctggaaaattagacatcagctctccaggtggagaagagagggtt
cctgctgtccccaaggagccaggactgagggggtttctcccagaaagcaaattcagtcac
accctagctgatcctgtgcttcgagatgcaggcccccgcaggagggggaggcgacctcgg
aatgaactcctgaaagctccagccattgtagcggactctccttctggaatgggaccactg
ttcatgaatgggctgattgcagggatggacctggtaggattgcagaatgtgagaaatatt
ccaggcattcctctcactgggctggtaggcttcccagctggttttgccaccatgcctact
ggtgaagaggttaaaaacaccctgagcatgctgcccatgatgctgccaggcatggccaca
gtgccccagatgtttggtgttggcggactcctcaacacacccatggcaaccacctgcacg
accacggcatcagcatctctcggaagcacaaaaagtggtacctcagccactgaaaaaact
acagaggacaagctgagtggccatgatgtaaaagcagacactctggtggaagataagcct
ggccctagtccattttctgatcagtctgaacccacaataactactagtagtcctgtggct
ttcaacccatttctcatcccaggagtgtctcctggactcatttacccttccatgtttctc
tcccctggcatgggcatgactctgccagccatgcaacagggcagacactcagacatagtt
ggtctagagacccagaagaggaaaaagaagaaaacaaagggggacaaccccaccccagag
cctgcttctgcgtgtgagagggagccaggcagtgatcagaactgcaccgagtccagtgcc
actgtgtccccagagagagaacacgtggcacaggccagggaagaggggctcaaagactcc
aatgatgataccaattag
DBGET
integrated database retrieval system
