Arvicanthis niloticus (African grass rat): 117702830
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Entry
117702830 CDS
T08817
Symbol
Cd44
Name
(RefSeq) CD44 antigen isoform X2
KO
K06256
CD44 antigen
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04512
ECM-receptor interaction
anu04640
Hematopoietic cell lineage
anu05169
Epstein-Barr virus infection
anu05205
Proteoglycans in cancer
anu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117702830 (Cd44)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
117702830 (Cd44)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
117702830 (Cd44)
05205 Proteoglycans in cancer
117702830 (Cd44)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
117702830 (Cd44)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117702830 (Cd44)
04090 CD molecules [BR:
anu04090
]
117702830 (Cd44)
00535 Proteoglycans [BR:
anu00535
]
117702830 (Cd44)
00536 Glycosaminoglycan binding proteins [BR:
anu00536
]
117702830 (Cd44)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117702830 (Cd44)
Exosomal proteins of other body fluids (saliva and urine)
117702830 (Cd44)
Exosomal proteins of colorectal cancer cells
117702830 (Cd44)
Exosomal proteins of bladder cancer cells
117702830 (Cd44)
CD molecules [BR:
anu04090
]
Proteins
117702830 (Cd44)
Proteoglycans [BR:
anu00535
]
Cell surface proteoglycans
Others
117702830 (Cd44)
Glycosaminoglycan binding proteins [BR:
anu00536
]
Hyaluronan
Cell surface receptors
117702830 (Cd44)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
HpsJ
DUF1180
Motif
Other DBs
NCBI-GeneID:
117702830
NCBI-ProteinID:
XP_034349897
LinkDB
All DBs
Position
2:complement(75292278..75380057)
Genome browser
AA seq
738 aa
AA seq
DB search
MDKFWWHTAWGLCLLQLSLAQPQIDLNITCRYAGVFHVEKNGRYSISRTEAADLCQAFNS
TLPTMAQMELALSKGFETCRYGFIEGNVVIPRIHPNAICAANNTGVYILLTSNTSHYDTY
CFNASAPLEEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDIDASNTIDDD
FSSGSTIETSTSEGYIFHTHLPTTQPTGDQDDNFIGSTSATTLMTTPETPPKRQEAQSWF
SWFFQPSESKSHFHTTTKMPGTESNTKPTGWEPNEENEDETDKYPSFSGSGIDDDEDFIS
STIATTPRVSAHTEQNPDWTQWKPIHSNPEVLLQTTTRITDIDRNSTSAHGENWTQEPQP
PFNNHEYQDEEETTHATSTTWAAPNSTAEEAATQQEKWFENGWQGKNPPTPSEDSHVTEG
TTASAHNNHPSQRITTQSQEDVSWTNFFDPISHPMGQGHQTESKDMDSSHSTTLQPTSAP
NTHLVEDLNRTGPLSVTTPQSHSQNFSTLQGKLEEYEDHPTTSILPSSTKSGSKNTRRGG
SLPSDTTTSVEGYTPHYPDTMENGTLFPMTPAKTEVFEETEVTVATDSNFNVDGSKPGSQ
GSSMDPSGGSRIVTRGSELAGHSSGNQDSGVTTTSGPERRPQIPEWLIILASLLALVLIL
AVCIAVNSRRRCGQKKKLVINSGNGTVEDRKPSELNGEASKSQEMVHLVNKEPSETPDQF
MTADETRNLQSVDMKIGV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttttggtggcacacagcttggggactttgcctcttgcagttgagcctggca
cagccgcagatcgatttgaatataacctgccgttacgcaggtgtattccatgtggagaaa
aatggccgctacagtatctccaggactgaggcagctgacctctgccaggctttcaacagc
accttgcccacgatggcccagatggagttggccctgagcaaggggtttgaaacatgcagg
tatgggttcatagaaggaaatgtggtaatcccaaggatccaccctaacgctatctgtgcg
gccaacaacacaggagtgtacatcctcctcacgtctaacacctcccactatgacacatat
tgcttcaatgcctcagctcctcttgaagaagactgtacatcagtcacagacctacccaat
tcctttgatggaccagttaccataactattgtcaaccgtgatggtacccgctacagcaag
aagggcgagtatagaacacaccaagaagacatcgatgcctctaacactatagatgatgac
ttcagcagcggatccaccattgagacgagcacctcagaaggctacattttccacacccac
cttcccactacacagcctactggagaccaggatgacaactttatcgggagcacctcggcc
accaccttgatgaccacccctgaaacaccacccaagaggcaagaagcccagagctggttt
tcatggttttttcaaccatcagagtccaagagtcattttcatacaacaacgaagatgcct
ggtacggagtcaaataccaagccaacaggctgggagccaaatgaggaaaatgaagatgaa
acagacaaataccccagtttttctggatcaggcattgatgatgatgaagattttatctcc
agcaccattgcgactactccacgggtttctgcccacacagaacagaacccagactggacc
cagtggaagccaatccattcaaacccggaagtactacttcagacaaccaccaggattact
gatatagacagaaacagcaccagtgctcatggagaaaactggacccaggaaccccagcct
cctttcaataaccatgagtatcaggatgaagaggagaccacacatgctacaagcacaacc
tgggcagctcctaatagtacagcagaagaagcagctacccagcaggagaagtggtttgag
aatggatggcaggggaagaacccccctaccccaagtgaagactcccatgtgacagaaggg
acaactgcctcagcccacaacaaccatccaagtcaaagaataacaacacagagtcaagag
gatgtttcctggaccaatttcttcgacccgatctcacatccaatgggacaaggtcatcaa
acagaaagcaaggatatggactccagtcatagtacaacccttcagcctacttcagctcca
aatacccatttggtggaagacttgaacaggacaggaccactttcagtgacaactccacag
agtcattctcagaacttctctacattacaaggaaagctggaagaatacgaagaccatcca
acaacttctattctgccatctagcacaaagagtggtagtaagaacacaagaagaggtgga
agtcttcccagtgatacgactacttcagtggaaggttacacccctcattacccagacact
atggaaaatgggactctcttcccaatgacccctgctaagactgaggtctttgaagaaact
gaagtgactgttgctactgactccaactttaatgttgatggctccaaaccaggcagtcaa
ggctcatccatggaccccagtgggggttcccgcattgtgactcgtggatctgaattagct
ggacactcaagtgggaatcaagacagtggagtgaccacaacttctggtcctgaaaggaga
cctcagattccagaatggctcatcatcttggcatccctcctggcactggttctgattctt
gctgtttgcattgctgtcaacagtaggagaaggtgtgggcagaagaaaaagctggtgatc
aacagtggcaacgggacagtggaggacaggaaaccaagtgagctcaacggggaggccagc
aagtctcaggaaatggtacatctggtgaacaaggaaccatcagagactccggaccagttt
atgacagccgacgagacccggaatctgcagagtgtggacatgaagattggggtgtag
DBGET
integrated database retrieval system
