Arvicanthis niloticus (African grass rat): 117702833
Help
Entry
117702833 CDS
T08817
Symbol
Soga1
Name
(RefSeq) protein SOGA1
KO
K27704
microtubule cross-linking factor
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117702833 (Soga1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117702833 (Soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Motif
Other DBs
NCBI-GeneID:
117702833
NCBI-ProteinID:
XP_034349912
LinkDB
All DBs
Position
2:complement(126389970..126452985)
Genome browser
AA seq
1655 aa
AA seq
DB search
MEAPAGESSARGYGPPSAPAPAAERKKSHRAPSPARPKDVAGWSLAKGRRGTGPGAATAC
GAASSARPDKKGRAVAPGARGAGPRVAGVRTGVRAKGRPRPGTGPRPPPPPPSLTDSSSE
VSDCASEEARLLGLELALSSDAESAAGGPAGTRTGQPSQPAPSGQQPPRPPASPDEPSVA
ASSVGSSRLPLSTSLAFSDLTEEMLDCGPGGLVRELEELRSENDYLKDEIEELRAEMLEM
RDVYMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRAAQTGQVDGELIRGLEQD
VKVSKDISMRLHKELEVVEKKRMRLEEENEGLRQRLIETELAKQVLQTELDRPREHSLKK
RGTRSVGKTDKKPTPQEDSADLKCQLHFAKEESALMCKKLTKLAKENDSMKEELLKYRSL
YGDLDAALSAEELADAPHSRETELKVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMK
DHGGGGGPEARLAFSSLGGECGESLAELRRHLQFVEEEAELLRRSSAELEDQNKLLLNEL
AKYRSEHELDVTLSEDSCSVLSEPSQEELAAAKLQIGELSGKVKKLQYENRVLLSNLQRC
DLASCQSTRPMLETDAEAGDSAQCVPAPLGETLEPHAGRLCRAREAEVLPGLREQAALVS
KAIDVLVADANGFSVGLRLCLDNECADLRLHEVPDNSEGPREAKLIHAILVRLSVLQQEL
NAFTRKADVALGSSGKEQPEPFPALPTLGSQGPAKEIMLSKDLGSDFQPPDFRDLLEWEP
RIREAFRAGDLESKPDPSRNFRPYRAEDNDSYASEIKELQLVLAEAHDSLRGLQEQLSQE
RQLRKEEADSFNQKMVQLKEDQQRALLRREFELQSLSLQRRLEQKFWSQEKNILVQESQQ
FKHNFLLLFMKLRWFLKRWRQGKVLPSEEDDFLEVNSMKELYLLMEEEEMNAQHSDNKAC
TGDSWTQNTPNEYIKTLADMKVTLKELCWLLRDERRGLTELQQQFAKAKAAWETERAELK
GHASQMELKAGKGASERSGPDWKAALQREREEQQHLLAESYSAVMELTRQLQMSERHWSQ
EKLQLVERLQGEKQQVEQQVKELQNRLSQLQKAAEPWVLKHSDLEKQDNSWKEARSEKTH
DKEGVSEAELGGTGLKRTKSVSSMSEFESLLDCSPYLAGGDARTKKLPNSPAFAFVSTET
VEPEKDAKEKPGLSTRDCSHIGSLACQEPAGRQMQRSYTAPDKTGIRVYYSPPVARRLGV
PVVHDKEGKILIEPGFLFTTAKPKESAEADGLAESSYSRWLCNFSRQRLDGGSGASTSGS
GPTFPAALHDFEMSGNMSDDMKEITNCVRQAMRSGSLERKVKSTSSQTVGLATVGTQTIR
TVSVGLQTDPPRSSLHSKSWSPRSSSLVSVRSKQISSSLDKVHSRIERPCCSPKYGSPKL
QRRSVSKLDSTKDRSLWNLHQGKQNGSAWARSTTTRDSPVLRNINDGLSSLFSVVEHSGS
TESVWKLGMSEARTKPEPPKYGIVQEFFRNVCGRAPSPTTAAGEESSKKPEPLSPASYHQ
SEGVARILNKKAAKTGGSEEVRPTMLSQMGKDGVLRDGDGSLILPSEDAVCDCSTQSLAS
CFIRPSRNTIRHSPSKCRLHPSESGWGGEERAAPQ
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccagcgggagagtcatcggcgcggggctacggccccccgtctgcgcccgcg
ccggccgcggagaggaagaagagccaccgcgcgccatcaccagcccggcccaaggacgtg
gccggctggtctctggccaaaggccgccgcggcacaggcccgggcgccgctacagcctgt
ggcgccgcgtcctcggcgaggcccgacaagaaggggcgcgcggtggctcccggcgcccgg
ggcgcggggccgcgggtggccggggtgcgcacgggggtccgcgccaagggccgccctcgt
ccgggtaccgggccccgcccgccgccgccgccgcccagcctcacggacagcagctccgag
gtgtccgactgcgcgtcggaggaggcgcgcctgctgggcctggagctggcgctgagcagc
gacgccgagtctgcggcgggcggcccggcggggacccgcacggggcagccgtcccagccc
gcgccgtcggggcagcaacctccgcggccgcccgcctcgccggatgagccgtcggtggct
gcgtcgtcggtgggcagcagccgcttgccactcagcacctcgctagctttctccgacctc
accgaggagatgctggactgtgggcccggaggcttggtgcgggagctggaagagctgcgt
tcggagaacgactatctcaaggatgagatcgaggagctacgggctgagatgctggagatg
cgggatgtctacatggaggaagacgtgtaccagctgcaggagttgcggcagcagctggac
caagccagcaagacctgccgcatcctgcagtaccgactgcgtaaagctgagcgccgcagc
ctccgcgctgcccagactggccaggtcgatggtgaactcatccgtggtctggaacaggac
gtaaaggtctctaaggacatctccatgcggcttcacaaggagctggaggtggtggagaag
aagcggatgaggctggaggaggagaacgaggggcttcgacagaggctcattgagacagag
ctggccaagcaggtgctacagacggagcttgatcgtcccagagagcattccttgaagaaa
agaggaacccggtctgtagggaagacagataagaagcctactccacaggaggatagtgca
gacctcaagtgccagctgcattttgcaaaggaggagtcggccctcatgtgcaagaagctc
accaagttggctaaggagaacgacagcatgaaggaggagctgctcaagtaccgttctctc
tatggggacctggacgcagccctgtccgccgaggagctggcagatgctccgcactctcgc
gagactgagctgaaggtgcacctgaagctggtggaggaggaggccaacctgctgagccgg
cgcatcgtggagctggaggtggagaaccggggcctgcgagccgagatggacgacatgaag
gaccacgggggtggcgggggtcccgaggccaggctggccttctcttcgctgggtggtgaa
tgcggggagagcctagcggagttgcggcgccatctgcagttcgtggaagaggaggccgag
ctgctgaggcgctcctcagccgagttggaggaccagaacaagttgctgctgaacgaactg
gccaaataccgctcggagcatgagctggatgtgacactgtcggaggacagctgctcggtg
ctcagcgagccctcgcaggaggagctggcagccgccaagctgcagatcggcgagctcagt
ggcaaggtcaagaagcttcagtatgagaaccgcgtgctcctttccaacctgcagcgctgt
gacttggcctcctgccagagcacacgccctatgctggagacggatgctgaggctggggac
tccgcgcagtgcgtgccggcccctctgggtgagacgctggagccccacgccggccggctc
tgcagggcccgtgaggccgaggtgctgcctggcctacgggagcaggcggctttggtgagc
aaggccatcgacgtcttggtggctgatgccaatggcttctcagtcggcctccgcctgtgc
ctggacaatgagtgcgccgacttgcgattgcacgaggtgcctgacaacagcgagggcccc
agggaggccaagcttatccatgccatcctggtgcgtctgagtgtgctgcagcaggaattg
aacgccttcacccgcaaggcagatgtggccttgggaagctctggcaaggagcagcctgag
cccttccctgctctgcccaccttgggctcccaggggcctgctaaggagatcatgctgtcc
aaagaccttggctctgacttccagccacctgacttcagagacctgctggagtgggagcct
aggatccgagaggccttccgtgctggtgacttggagtccaagcctgaccctagtcggaac
ttcaggccttaccgagctgaagataacgattcctatgcctctgagatcaaggagcttcag
ctggtcctggccgaggcccacgacagcctccggggcttgcaagagcagctgtcccaggag
cggcagctccggaaggaggaagctgacagtttcaaccagaaaatggtccagctgaaagaa
gaccagcagagggcgctgctgaggcgggaatttgagctgcagagtctgagcctccagcgg
cgtctggagcagaagttctggagccaagagaagaacatcctggtgcaggagagccagcag
ttcaagcacaacttcctgctgctcttcatgaagctccggtggttcctgaagcgctggcgg
cagggcaaggttctgcccagcgaggaggatgacttcctggaggtgaacagcatgaaggaa
ctgtacctgctgatggaggaagaggagatgaacgcccagcactcggataacaaggcctgc
acgggggacagctggacccagaacacgcctaatgagtacatcaagaccctggctgacatg
aaggtcacgttgaaggagctgtgctggctgctccgggacgaacgtcggggtctgacggag
cttcagcagcaattcgcaaaggccaaggccgcctgggagacagagcgggcggagctcaag
ggccatgcctcacagatggagctgaaggctgggaagggtgccagtgagaggtccgggcct
gactggaaggctgcactgcagagagagcgggaagagcagcaacacctcctggcagagtcc
tacagtgccgtcatggagctgacgaggcagctgcagatgagtgagcgccactggagccag
gagaagctgcagctggtggagcggttgcagggagaaaagcagcaggtggagcagcaggtg
aaggagctgcagaaccgcctcagtcagctgcagaaggctgctgagccctgggtcctgaag
cactcagacctggagaagcaagacaacagctggaaagaggcacgaagtgagaagacccat
gacaaggagggtgtttctgaagctgagcttgggggaaccggcttaaagaggaccaaatcg
gtctcctccatgtctgagtttgaaagtttgctcgactgttccccctaccttgctggcgga
gatgcccggaccaagaagctccccaacagccctgcttttgcctttgtgagtactgagacc
gtggagcctgagaaagatgccaaggaaaagcccgggctttccacccgggactgtagccac
attggtagcctggcctgtcaggagcctgcagggagacagatgcagcgcagctacactgct
ccagacaagactggaatccgagtctactacagtcccccagtggcccggcgcctgggtgtc
cctgtggtccatgacaaggagggcaagatcctcattgagccaggcttcctcttcaccaca
gctaagcccaaggagtcagccgaggctgacgggctggccgagagctcctacagccggtgg
ctttgcaatttctctcggcagcggctggacggaggatccggagccagcacctcaggctct
ggacccactttccccgcagccttgcacgactttgagatgtcgggcaatatgagtgatgac
atgaaggagatcaccaactgcgtgcggcaggccatgcgctccggctccctggagaggaag
gtaaagagcacatccagccagacagtaggtctggccactgtgggcacccagaccattcgg
acggtcagtgtaggcctgcagaccgacccacctcgcagcagcctccatagcaagagctgg
tcaccccgaagctcctcacttgtgtcggtgcgaagcaagcagatctcttcctccctggac
aaggtccattctcgcattgagcggccatgttgctcgcccaagtatggctcacccaagctc
cagaggcgatcagtgtccaagctggacagcaccaaggaccgcagcctgtggaacctgcac
cagggcaagcagaatggctcggcctgggctcgctccaccaccacacgggatagtccagta
ctgaggaacatcaatgatgggctgtccagcctctttagtgtggtggagcactcagggagc
accgagtctgtgtggaaactgggcatgtctgaggcccgaaccaagcctgagcctcccaag
tatggcattgttcaggagttcttccggaacgtgtgtggccgggccccgagccccactact
gcagcaggcgaggagagctccaagaaaccagagcccctttcgccagccagctaccaccaa
tctgagggtgtagccaggatcctgaataagaaggcagccaagacaggtggtagtgaagag
gtcagacccaccatgctgtcccagatggggaaggatggtgtccttcgagatggagatggg
tccttgatccttcccagtgaggatgccgtttgtgactgcagcacccagtcgcttgcctcc
tgcttcatcaggccatcccgcaataccatccggcactctccttccaagtgcaggctgcac
ccttcagagtcaggctggggcggggaggagagggcagctccccagtga
DBGET
integrated database retrieval system
