Arvicanthis niloticus (African grass rat): 117702928
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Entry
117702928 CDS
T08817
Symbol
Psmc3
Name
(RefSeq) 26S proteasome regulatory subunit 6A
KO
K03065
26S proteasome regulatory subunit T5
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03050
Proteasome
anu05010
Alzheimer disease
anu05012
Parkinson disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05017
Spinocerebellar ataxia
anu05020
Prion disease
anu05022
Pathways of neurodegeneration - multiple diseases
anu05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
117702928 (Psmc3)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
117702928 (Psmc3)
09164 Neurodegenerative disease
05010 Alzheimer disease
117702928 (Psmc3)
05012 Parkinson disease
117702928 (Psmc3)
05014 Amyotrophic lateral sclerosis
117702928 (Psmc3)
05016 Huntington disease
117702928 (Psmc3)
05017 Spinocerebellar ataxia
117702928 (Psmc3)
05020 Prion disease
117702928 (Psmc3)
05022 Pathways of neurodegeneration - multiple diseases
117702928 (Psmc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
anu03051
]
117702928 (Psmc3)
Proteasome [BR:
anu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
117702928 (Psmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
nSTAND3
AAA_16
RuvB_N
AAA_2
AAA_22
DUF815
Mg_chelatase
AAA_33
PhoH
DUF5827
CCDC22_CC
IstB_IS21
AAA_24
AAA_7
Sigma54_activat
AAA_28
AAA_14
RNA_helicase
ATPase
AAA_11
Defensin
Motif
Other DBs
NCBI-GeneID:
117702928
NCBI-ProteinID:
XP_034350087
LinkDB
All DBs
Position
2:64654478..64659888
Genome browser
AA seq
442 aa
AA seq
DB search
MQEMNLLPTPESPVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKS
EVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQR
KGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEV
DERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA
RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD
SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP
NEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTH
EDYMEGILEVQAKKKANLQYYA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatgaatctgctgccgactcccgagagtccagtgactcggcaggagaagatg
gcgaccgtgtgggatgaagctgagcaagatggcattggggaggaggtgctcaagatgtcc
acagaagagatcgtccagcgcacacggctgctagacagcgagatcaagataatgaagagt
gaagtattgcgagtcacccatgaactccaagccatgaaagacaaaatcaaagagaacagt
gagaaaatcaaagtgaacaaaaccctgccataccttgtctccaacgtcattgagttgctg
gatgttgaccccaatgaccaggaggaggatggtgccaatattgacctggactcgcagagg
aagggcaagtgtgcagtgatcaaaacttctacccgacaaacatacttcctgccagtgatt
gggttggtagatgcagaaaagctgaagccaggagacctggtgggtgtgaacaaagactct
tacctgatcctggagaccctgcccactgagtatgactctcgggtgaaggccatggaggtg
gatgagcggcccacagagcaatacagtgacatcgggggactggacaagcagatccaggag
ctggtggaagccattgtcctgcctatgaaccacaaagagaagtttgagaacttgggtatc
cagcccccaaaaggagtgctgatgtatgggccgcctggtacagggaagactctgcttgct
cgagcctgtgccgctcagaccaaggccaccttcttgaagctggcaggccctcagctggta
cagatgtttattggagatggtgccaagctggtccgtgatgcttttgccctggccaaggaa
aaggcaccatctattatcttcatagatgaattggatgccattggtaccaagcgcttcgac
agtgaaaaggcaggggaccgagaggtgcagaggaccatgctggagcttctgaaccagctg
gatggcttccagcccaacactcaagtgaaggtaattgcagccactaacagggtggacatc
ctggaccctgccctgctgcgctcaggccgcctggaccgcaagattgagtttccaatgccc
aacgaggaggcccgagccagaatcatgcagatccactcacggaagatgaacgtgagtcct
gatgtgaactatgaagagctggctcgctgcactgatgacttcaatggggcccagtgcaag
gctgtgtgtgtggaggcgggtatgatcgcactgcgcaggggtgccacggagctgactcac
gaggactacatggagggcatcctggaggttcaggccaagaagaaagccaacctgcagtac
tatgcctag
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