Arvicanthis niloticus (African grass rat): 117702957
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Entry
117702957 CDS
T08817
Symbol
Vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04140
Autophagy - animal
anu04148
Efferocytosis
anu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117702957 (Vps16)
04148 Efferocytosis
117702957 (Vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117702957 (Vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117702957 (Vps16)
Membrane trafficking [BR:
anu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117702957 (Vps16)
Hops complex
117702957 (Vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
117702957
NCBI-ProteinID:
XP_034350138
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Position
2:101197542..101219860
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AA seq
839 aa
AA seq
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MDCYTANWNPLGDSAFYRKYELYSMDWALQEELKDCLVAAAPYGGPIALLKNCWRKEKAA
SVRPVLEIYTASGVLVANLLWKSGPVVALGWSAEEELLCVQEDGAVLVYGFHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAYRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTLCHDRVTHILLAVGPDLYLLDHATCSAVTPAGLAPGVSSFLQMAVSFTYRYLALFTDT
GHIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGNAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDSFVH
MCQDLRVLNAIRDYHIGIPLTYTQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELDTLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMKLLRLQRRLEDELGGRFLDLSLHDTVTTLILGGHNKRAEQLARDFR
IPDKRLWWLKLAALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKHEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNETELSLVLSHCTGATDGAIADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgttacactgcgaactggaatccactcggggactctgccttttaccggaagtat
gagctgtacagcatggactgggccctgcaggaagagctcaaggattgcctggtggctgct
gcaccctatgggggtcccattgcactcctgaagaactgttggagaaaagagaaagctgcc
agcgtgcggccagtactggagatctacactgcttctggcgtcctagtggctaacttgctg
tggaagagtgggcctgtggtggccctcggctggtcagctgaggaggagctgctctgtgtg
caagaagacggtgcagtgctagtttatgggtttcatggagacttccggaggcacttcagc
atgggcaatgaagtgcttcagaaccgtgtcctggatgcccggattttccacactgagttt
ggttctggggtggccatccttacaggagcctatcgctttactctgagtgccaatgtgggt
gacctcaaactccgtcggatgccagaggtgccaggtctgcagagtgcaccctcatgttgg
accacactgtgccacgatcgagtaacacacattcttctggctgtaggacctgatctttat
cttctggatcatgctacctgctcagcagtgacacctgctggcctagctccaggagtgagc
agcttcctacagatggccgtatccttcacgtatcgttacctggcactcttcacagacacg
ggccacatctggatggggacagcatcactcaaggagaagctgtgtgagttcaactgcaac
atccgggcacccccgaagcagatggtctggtgtagccgtcctcgaagcaaggaaagggct
gttgttgtggcctgggagaggcggctgatggtggtgggcaatgcgcctgaaagcattcag
tttgtgctagatgaggactcctacttagtgcctgagcttgatggggtccgcatcttctcc
cgaagcacccatgaattcctacacgaagtcccagtggccagtgaagagatcttcaaaatt
gcctcaatggcccctggagcactgctgctggaggcccagaaggaatatgagaaagagagc
cagaaagcagatgagtacctgcgggagatccaggaattggggcagctgacccaggctgtg
cagcagtgcattgaggctgcaggacatgagcaccagccagacatgcaaaagagtctgctc
agggcggcttcatttggaaagtgtttccttgacagatttccacctgacagcttcgtgcac
atgtgtcaggaccttcgagtgctcaatgctattagggactaccacatcgggatccctctg
acctatacccaatacaagcagctcaccatccaggtgctgctagacaggcttgtgttgcgg
aggctttatcccctggctatccagatatgcgagtacctgcgccttcctgaagtgcaaggt
gtcagcaggatcctagcccactgggcctgctacaaggtgcagcagaaagatgtctcagat
gaagatgtagcacgggctattaatcagaagctgggtgacacgcccggtgtctcatactct
gacattgctgcgcgggcctatggctgtggccgcactgaactggccatcaagctgctggag
tatgagccacggtcaggggagcaggtacctcttctcctgaagatgaagaggagcaaacta
gcactgagcaaggccattgagagtggagacactgacctggtgtttacagtgttgttgcac
ctgaagaatgaactcaatcgaggagactttttcatgactctccggaaccaacccatggcc
ctgagtttgtatcgacagttctgtaagcatcaggagctagacactctgaaggacctttac
aatcaggacgacaatcaccaggaattgggcagcttccacatcagagccagctatgctgct
gaagagcgtattgaagggcgagtggcagctctgcaaacagcagctgatgccttctacaag
gccaagaatgagtttgcagccaaggccacagaggatcaaatgaagctcttgcggctacag
cgacgcctagaggatgagctagggggcaggttcctagacctgtctctacatgacacagtc
accactcttatccttggaggccacaacaagcgggcagagcagctggcacgtgactttcgc
atccctgacaagaggctctggtggttaaagctggccgccctggcagatttggaagattgg
gaggagctggagaagttttccaagagcaagaaatcaccgattggctacctgccctttgta
gagatctgcatgaagcagcataacaaacacgaggccaagaagtacgcttcccgtgtgggc
cctgagcaaaaggtcaaggctttgcttcttgtcggggacgtggctcaggctgcagatgtg
gctattgagcaccggaatgaaaccgagctgagccttgttttgtcccactgcactggagct
acagatggggccatagctgacaagattcagcgggccagagcacaagctcagaagaagtga
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