Arvicanthis niloticus (African grass rat): 117702960
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Entry
117702960 CDS
T08817
Symbol
Itgav
Name
(RefSeq) integrin alpha-V isoform X1
KO
K06487
integrin alpha V
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04081
Hormone signaling
anu04145
Phagosome
anu04148
Efferocytosis
anu04151
PI3K-Akt signaling pathway
anu04510
Focal adhesion
anu04512
ECM-receptor interaction
anu04514
Cell adhesion molecule (CAM) interaction
anu04518
Integrin signaling
anu04810
Regulation of actin cytoskeleton
anu04820
Cytoskeleton in muscle cells
anu04919
Thyroid hormone signaling pathway
anu05163
Human cytomegalovirus infection
anu05165
Human papillomavirus infection
anu05200
Pathways in cancer
anu05205
Proteoglycans in cancer
anu05222
Small cell lung cancer
anu05410
Hypertrophic cardiomyopathy
anu05412
Arrhythmogenic right ventricular cardiomyopathy
anu05414
Dilated cardiomyopathy
anu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117702960 (Itgav)
09133 Signaling molecules and interaction
04081 Hormone signaling
117702960 (Itgav)
04512 ECM-receptor interaction
117702960 (Itgav)
04514 Cell adhesion molecule (CAM) interaction
117702960 (Itgav)
04518 Integrin signaling
117702960 (Itgav)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117702960 (Itgav)
04148 Efferocytosis
117702960 (Itgav)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117702960 (Itgav)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117702960 (Itgav)
04810 Regulation of actin cytoskeleton
117702960 (Itgav)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
117702960 (Itgav)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117702960 (Itgav)
05205 Proteoglycans in cancer
117702960 (Itgav)
09162 Cancer: specific types
05222 Small cell lung cancer
117702960 (Itgav)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
117702960 (Itgav)
05165 Human papillomavirus infection
117702960 (Itgav)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
117702960 (Itgav)
05410 Hypertrophic cardiomyopathy
117702960 (Itgav)
05412 Arrhythmogenic right ventricular cardiomyopathy
117702960 (Itgav)
05414 Dilated cardiomyopathy
117702960 (Itgav)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117702960 (Itgav)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117702960 (Itgav)
04515 Cell adhesion molecules [BR:
anu04515
]
117702960 (Itgav)
04090 CD molecules [BR:
anu04090
]
117702960 (Itgav)
Membrane trafficking [BR:
anu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117702960 (Itgav)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117702960 (Itgav)
Exosomal proteins of epithelial cells
117702960 (Itgav)
Cell adhesion molecules [BR:
anu04515
]
Integrins
Integrin alpha subunits
117702960 (Itgav)
CD molecules [BR:
anu04090
]
Proteins
117702960 (Itgav)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
LYRIC
DctQ
Motif
Other DBs
NCBI-GeneID:
117702960
NCBI-ProteinID:
XP_034350141
LinkDB
All DBs
Position
2:58558753..58631610
Genome browser
AA seq
1043 aa
AA seq
DB search
MAAPGRLLLRPRPGGLLLLLPGLLLPLASAFNLDVESPAEYAGPEGSYFGFAVDFFVPST
SSRMFLLVGAPKANTTQPGIVEGGQVLKCDCSSSRRCQPIEFDSTGNRDYAKDDPLEFKS
HQWFGASVRSKQDKILACAPLYHWRTEMKQEREPVGTCFLQDGTKTVEYAPCRSKNIDAD
GQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIISKYDPNVYSIKYNNQLAT
RTAQAIFDDSYLGYSVAVGDFNGDGIEDFVSGVPRAARTLGMVYIYDGKNMSSLHNFTGE
QMAAYFGFSVAATDINGDDYADVFVGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTK
LNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGDDKKGLVYIFNGRSTGLNSVPSQI
LEGQWAAQSMPPSFGYSMKGATDVDRNGYPDLVVGAFGVDRAILYRARPVVTVNAGLEVY
PSILNQDNKICPLPGTSLKVSCFNVRFCLRADGKGTLPRKLNFQVELLLDKLKQKGAIRR
ALFLHNRSPGHSKNMSVFRGGQMQCEELVAYLRDESEFRDKLTPITIFMEYRLDQKTAAD
ATGLQPILNQFTPANVSRQAHILLDCGEDNVCKPKLEVSVDSDQKKIYIGDDNPLTLTVK
AQNQGEGAYEAELIVSIPPQADFIGVVRNNEALARLSCAFKTENQTRQVVCDLGNPMKAG
TQLLAGLRFSVHQQSEMDTSVKFDLKIQSSNSFDNVSPVVSYKVDLAVLAAVEIRGVSSP
DHIFLPIPNWEYKENPETEEDVGPVVQHIYELRNNGPSSFSKAILNLQWPYKYNNNTLLY
ILHYDIDGPMNCTADTEINPLRIKTPEKNDTASGQGERNHLITKRDLALSEGDVHTLGCG
IAKCLQITCQVGRLDRGKSAILYVKSLLWTETFMNKENQNHSYSLKSSASFNIIEFPYKN
LPIEDLFNSTLVTTNITWGIQPTPMPVPVWVIILAVLAGLLLLAVLVFVMHRMGFFKRVR
PPQEEQEREQLQPHENGEGNSET
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcccgggcggctgctgcttcgccctcgccccggcggcctcctgctgctgctg
cctggcctcctgctgcccctcgccagcgccttcaacctggacgtcgaaagccccgccgag
tacgccggccccgagggtagttacttcggattcgccgtggacttcttcgtgcccagcacg
tcctccaggatgtttctcctggtgggagccccaaaagcaaacacaacccagcctgggatt
gtagaaggagggcaagttctcaagtgtgactgctcatccagccggcgttgccagcccatt
gaatttgattcaacaggcaatcgagattatgccaaagatgacccactggagtttaagtcc
caccagtggtttggagcctctgtgaggtcaaagcaggataaaatcttggcctgtgctcca
ttgtatcactggaggactgagatgaagcaggagagagagccagttggaacctgctttctt
caggatggcacaaagaccgttgagtatgctccatgcaggtcaaaaaatattgatgctgat
ggacagggattttgtcaaggaggattcagcattgattttactaaagctgacagagtactt
cttggtggtcctggtagcttttattggcaaggtcagctcatttcggatcaagtggcagaa
atcatatccaaatatgaccccaatgtctacagcatcaaatataataaccaattagcaaca
cggactgcacaagcaatttttgatgacagttatttgggttactctgtggccgtgggagac
ttcaatggtgacggcattgaagattttgtttcaggagttccaagagcagcaaggactttg
ggaatggtttatatttatgatgggaaaaatatgtcctctttacacaattttactggtgaa
cagatggctgcatattttggattttctgtagctgctactgacattaatggggatgattac
gcagatgtgtttgttggagctcctctgttcatggaccgaggttctgacggaaaactgcag
gaggtcggccaggtctcagtgtctctgcagagagcgtcgggagacttccagactacaaag
ctgaacggctttgaggtttttgccaggtttggaagtgccatagctcctttgggagacctg
gaccaggatggcttcaatgatattgcaattgctgctccatatggtggtgatgataaaaag
ggacttgtttatatcttcaatggaagatccacaggcttgaattcggtgccatctcagatc
ctcgaggggcagtgggctgctcagagcatgcccccaagctttggctattcaatgaaagga
gctacagatgtggatagaaatggatatccagacttagttgtaggagcttttggtgtggat
cgagctatcttatacagagccagacccgttgtcaccgtaaatgctggccttgaagtgtac
cccagcattttaaatcaagacaataagatctgcccgttgcctgggacatctctcaaggtt
tcctgttttaatgtcaggttctgcttaagggcagatggcaaaggaacccttccgaggaag
ctcaacttccaggtggagcttcttttggataaactcaagcaaaagggagccatccgacga
gcactgtttctccataacaggtccccggggcactccaagaacatgagtgttttcaggggg
ggacagatgcagtgtgaggagctggtcgcctatctccgggatgaatctgaatttagagac
aagctcactcccatcaccatttttatggagtatcggttggaccagaaaacggctgctgat
gccacaggcttgcagcccatcctgaaccaatttactcccgccaatgtcagtcggcaggct
cacattctgctcgactgtggcgaagacaatgtctgtaaacctaaactggaagtttctgta
gatagtgatcaaaagaagatctatattggggacgacaaccctttgacactgactgtgaag
gcgcagaatcaaggggaaggagcctatgaagctgagctcatcgtttccatcccaccgcag
gctgacttcatcggggttgtccgaaacaacgaagccttagcaagactgtcctgcgcattt
aagacagaaaaccaaacccggcaggtggtgtgcgaccttggaaatccgatgaaggctgga
actcaactgctcgctggccttcgtttcagcgtgcaccagcaatcagagatggatacttct
gtgaagtttgacttgaaaatccagagctctaattcttttgacaatgtaagcccagttgta
tcttacaaggtggaccttgctgttttggctgctgtggagataagaggagtttcaagtcca
gatcatatctttcttccaattccaaattgggagtacaaggaaaaccctgagactgaagaa
gacgttgggcctgttgttcagcacatctatgagctgcgaaacaatggtccaagctccttc
agcaaggcaatcttaaatctccagtggccttacaaatacaacaacaacactttgctgtac
attcttcattacgacattgatgggccaatgaactgcacggcagatacagagatcaaccct
ctgagaattaagacaccagaaaagaatgacacagcatctgggcaaggagaaaggaatcat
ctcatcaccaagcgggatctcgccctcagtgagggagatgttcacactttgggttgtgga
attgctaagtgcttgcagatcacctgccaggttggtcgactggatagagggaagagcgct
atcctgtacgtgaaatccctgctgtggactgagacgttcatgaacaaggagaaccagaac
cattcctattccctgaagtcatctgcttcgtttaatatcatagaatttccttacaagaat
cttccgattgaggacctcttcaactctacactagtcaccactaacatcacctggggcatc
cagcccacgcccatgcctgtgcctgtgtgggtgatcatcttggcagttctcgcagggctg
ctgttactggctgtgttggtgtttgtgatgcacaggatgggctttttcaaacgtgtccga
ccacctcaagaagagcaagaaagagaacagcttcagcctcatgagaatggcgaaggaaac
tctgaaacctaa
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