Arvicanthis niloticus (African grass rat): 117702984
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Entry
117702984 CDS
T08817
Symbol
Ambra1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04137
Mitophagy - animal
anu04140
Autophagy - animal
anu05010
Alzheimer disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05017
Spinocerebellar ataxia
anu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117702984 (Ambra1)
04137 Mitophagy - animal
117702984 (Ambra1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
117702984 (Ambra1)
05014 Amyotrophic lateral sclerosis
117702984 (Ambra1)
05016 Huntington disease
117702984 (Ambra1)
05017 Spinocerebellar ataxia
117702984 (Ambra1)
05022 Pathways of neurodegeneration - multiple diseases
117702984 (Ambra1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117702984 (Ambra1)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117702984 (Ambra1)
Membrane trafficking [BR:
anu04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
117702984 (Ambra1)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
117702984 (Ambra1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
eIF2A
WD40_MABP1-WDR62_2nd
Acyl_CoA_thio
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
117702984
NCBI-ProteinID:
XP_034350171
LinkDB
All DBs
Position
2:65301123..65489362
Genome browser
AA seq
1300 aa
AA seq
DB search
MKVVPEKNAVRILWGRERGTRAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLA
FSPDRTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEV
RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLL
HNFLHMLSSRSSGIQVGEQSTVQDSATPSPPPPPPQPSTERPRTSAYIRLRQRVSYPTTV
ECCQHPGILCLCSRCAGTRVPSLLPHQDSVPPASARATTPSFSFVQTEPFHPPEQASSTQ
QDQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHRELAPGLTGSEW
TRTVLTLNSRSEVESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPSSGLAT
ESDGGNGSSQNNSGNIRHELQCDLRRFFLEYDRLQELDQSLSGETPQTQQAQEMLNNNIE
SERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASSS
WHVSTTFEGMPPSGNQLPPLERTEGQMPSSSRLELSSSASSQEERTVGVAFNQETGHWER
IYTQSSRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDPA
RLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSTSSSSSENQGPSVEGTDLEFEDF
EDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVL
AGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISA
DGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVG
LASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPE
PGLGLAYGTNKGDLVICRPEALNSGIEYYWDQLNETVFTVHSNSRSSERPGTSRATWRTD
RDMGLMNAIGLQPRNPTTSVTSQGTQTLALQLQNAETQTEREEEELGTTSSGPGEGEGSE
YGGSGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTESG
AARTSSPQPSTSRGLLSEPGQLAERGLSPRTASWDQPSTSGRELPQPALSSSSPVPIPVP
LASNEGPTMHCNVTNNSHLPEGDGSNRGEAAGPSGEPRNR
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtcccagagaagaatgctgtacgaatcctctggggccgagaacggggcact
cgtgccatgggtgcccagcggcttctgcaggagctggtggaggataagactcgatggatg
aaatgggaaggcaagagagtagaactgcctgatagtccacgctcgaccttcttactggcc
ttcagcccagacaggactctcttggcgtccacacatgtgaatcataacatctacattaca
gaggttaagactggcaagtgtgttcactctctgattggacaccgccgtactccatggtgt
gtcacttttcatcccaccatctcaggccttattgcttctggctgcctagatggggaagtt
aggatttgggatttgcatggtggcagtgaaagctggttcacagatagcaacaatgccata
gcttccttggctttccaccctacggctcagctcctactgattgccactgcaaatgagatc
catttctgggattggagtcgtcgggagccctttgctgtggtgaaaacagctagtgagatg
gaacgtgtccgtctggtgagatttgatccacttggacactacttacttacagctattgtt
aacccttctaaccagcagggtgatgacgaaccagaaatccctatagatggaacagagtta
tctcactaccgtcagcgtgccctcctgcaatcacagccggttcgccggacacctctcctc
cacaatttcctgcacatgctgtcctcccgctcctctggcatccaggtgggagagcaaagc
acagtacaagattctgctaccccctcacccccaccgcctccccctcagccctccacggag
cgtcccaggacttccgcttacatcagactccgacagcgggtcagttaccccaccacagtt
gagtgctgccagcaccctgggatcctgtgcctttgcagccgctgtgctggcactcgagtt
ccttccctcttgccacaccaggacagtgttccccctgcttctgccagagctactacccct
tccttttcttttgtacagaccgagcccttccatcccccggagcaggcttcatcaacgcag
caggaccagggcctcctgaaccggccgtctgccttcagtacagtccagagcagcactgcg
ggcaacacgctccgcaacctcagtctgggccctacccgtcgctctttggggggccctttg
tctagccacccttctaggtatcacagagaactagcccctgggctgacaggttctgagtgg
acccggacagtactcactctgaactcacgttctgaggtagaatctatgcccccaccaagg
accagtgcctcctcagtgagtttgctttctgtactgagacagcaggaaggtggctctcag
gcatctgtgtatacttcagccacagaagggaggggttttccatcatcaggattggcaact
gagtcagatggagggaatggttccagccaaaacaactcaggcaacattcgccatgagctt
caatgtgacctgagacgcttctttttggagtatgacaggctgcaggagctggatcagagc
ctgagcggggaaactccccagacccaacaggcccaggaaatgctcaacaataatattgaa
tctgagagaccaggtccttcccatcagcctaccccacacagcagtgagaacaactccaac
ctgtctcggggccatcttaatcgctgccgtgcatgccataatcttctaaccttcaacaat
gatacccttcgttgggaaagaaccacacctaactactcatctggtgaggctagctcttcc
tggcacgtctccactacctttgagggcatgccaccaagtggcaaccagctaccacctctt
gagcggactgagggccaaatgcctagctccagcaggctggagttgagcagctctgctagt
tcacaagaggagaggactgtgggggtggcctttaaccaggagacaggccactgggaacga
atttatactcagtccagcagatctggaactgtatcacaggaggccttacatcaagatatg
cctgaagaaagctccgaggaagactccctcaggaggaggctgctggagtcttccctcatt
tcattatcccgttatgatggagcaggatccagagagcacccaatttacccagacccagcg
agattatctcctgctgcatactacgcccagaggatgatccagtatctctcaaggagagac
agtattcgccagcgctccatgcgctaccaacagaatcggcttcgttcttccacctcctct
tcttcctcagaaaaccagggtccatcagtagagggaaccgacttggaatttgaggacttt
gaggacaatggtgacagatctaggcaccgagctccccgaaatgcccgaatgtctgcacct
tcacttggacgctttgtcccaaggcgttttttgctgcctgagtacttgccgtatgctggg
atttttcatgaacgtggacagcctggtttggctactcattcttctgttaacagggtcctc
gcaggggcagtaattggagatggacagtctgctgtggctagtaacattgccaatactacc
tacaggctccaatggtgggacttcactaagtttgaccttccagaaatcagtaatgcctcc
gtgaatgtcctggtacagaactgcaagatctataatgatgccagctgtgacatttctgca
gatggccagctcctggcagctttcattccaagcagccagaggggctttcctgatgaaggc
atcctggcagtgtattccctggccccccataacttgggggaaatgctctacaccaagaga
tttggtcccaatgccatttctgtaagcctgtccccaatgggccgatacgttatggtgggc
ttggcctcacgaaggatcctgctgcacccctccacagagcacatggtagcccaggtcttc
agactccaacaagcccatggtggtgagacttccatgaggagagttttcaacgtcctttac
cccatgcctgctgaccagcggaggcacgtcagcatcaattctgcccgttggcttcctgag
ccagggcttggtttggcctatggcaccaacaaaggagacctggtgatctgccgaccagag
gccttaaactctggcatcgagtactactgggaccagctaaatgaaacggtcttcactgtc
cactcaaatagcaggagcagcgagcggcctggaaccagcagagccacgtggcggacagac
agagacatgggcttgatgaatgcaattgggctgcaacctcggaacccaaccacctctgtg
acatctcagggcacccagactctggccctccagttgcagaatgctgaaacacagactgag
agggaggaagaggaactagggacaacatcctcaggtcctggtgaaggcgagggctcagaa
tatggtggcagtggggaagatgccctcagccggatccagaggctaatggctgagggtggc
atgacagctgtggtacagcgggagcagagcaccaccatggcctccatgggtggctttggc
aacaacatcatcgttagccaccgcattcaccgcagctcccagacaggcacagagtcaggg
gctgctcggacctcctcaccccagccctccacctctcgaggactgctctcagaacctggg
caactggcagagcgagggctaagcccccggacagcctcctgggaccagcctagtacctct
gggagggaactaccccagccagccctatcctcttcctcccctgtccccattccagtcccc
cttgccagcaatgagggaccaacaatgcactgcaatgtgaccaataacagtcaccttcct
gagggtgatggtagcaacaggggggaagctgcaggccctagtggggagccacggaaccga
tag
DBGET
integrated database retrieval system
