Arvicanthis niloticus (African grass rat): 117703002
Help
Entry
117703002 CDS
T08817
Symbol
Rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04015
Rap1 signaling pathway
anu04510
Focal adhesion
anu04722
Neurotrophin signaling pathway
anu04910
Insulin signaling pathway
anu05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
117703002 (Rapgef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117703002 (Rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117703002 (Rapgef1)
09156 Nervous system
04722 Neurotrophin signaling pathway
117703002 (Rapgef1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
117703002 (Rapgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
117703002
NCBI-ProteinID:
XP_034350263
LinkDB
All DBs
Position
2:6836853..6956196
Genome browser
AA seq
1219 aa
AA seq
DB search
MGNAIEKQKPLRQSHLCPWKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSKT
PEKPVSKEARDTFLPEGYPIPLDLEQQAVEFMSTSAVASRSQRQKNLCWLEEKEKEVVSA
LRYFKTIVDKMAIDKKVLEMLPGSATKVLEAILPLVQTDPQIQHSSALSSCYSRVYQSLA
NLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPSS
PASKPDGQPELPLTDREMEILNKTTSVSPPTELLPDSTSDEVAPPKPPLPGIRVVDNSPP
ALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVECYSQRRLSGGSRSCGGE
SPRLSPCSSTGKLSRSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQTP
PQAACSLSPLPESLGESGPPFLGHPFQLPPQQEGQQTDTPPALPEKKRRSAVSQTTDSSG
CRVSYERHPSQYDNISEGDLQNPVQPVPYPPFAAILPFQQGASSTPAEFVGDFSVPESAG
DPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSVFYQTPQSEHIYQQKNRMLMEVYGFSDS
FCGSDSTQELAPPPALPPKQRQLQASYAASSFSVSYCVQQTKVAFTPEDGSAAQGLSVSV
SNSFLNRHGSLPVPSYKSVFRSYSQDFMPHHQASVQPFLPPTSSSSPHFPPVHASQSSDL
AVPTVSSPPPSTVDGPLSSAQDSSSHRNPVRLPSETSFSDSELPSGKDGHPRDPSVSSAS
GRDSRENGERSPKSLDGLESAQAEEEVDELSLIDHNEIMARLTLKQEGDDGPDVRGGSGD
ILLVHATETDRKDLVLYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNT
FFVLVRVVDELCLVELTEEILKLLMELVFRLVCSGELSLARVLRKNILDKVDQKKLLRCA
HSDQPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPN
LTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDS
APIRRLEWQRQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLG
NPDYIDGKVNFSKRWQQFNILDSMRCFQQAHYEIRRNDDIINFFNDFSDHLAEEALWELS
LKIKPRNITRRKTDREEKT
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgccattgaaaaacagaagcccctgagacaaagtcatctgtgcccctggaaa
caagactctcagcgttctcatctctcctccttcaccatgaagctgatggacaaattccac
tctcccaaaatcaagagaacaccatccaagaagggaaagccagccgaggtgtcgaagact
cctgagaagcctgtgagcaaagaggcaagagacacatttctaccagagggctaccctatc
cccttggatctggagcagcaggcagtagaatttatgtccaccagtgctgtggcttccagg
tctcagaggcagaagaacctgtgctggctggaggagaaagagaaggaggttgtcagtgcc
ttgcgctactttaagaccattgtggacaaaatggccattgataagaaggtcctggagatg
ctcccggggtcagccaccaaggtgctggaggccatcctgcccctggtgcagactgatccc
cagatccagcacagctcagccctctcctcctgctacagccgagtgtaccagagccttgcc
aaccttatcagatggtctgaccaggtgatgctggagggtgtgaactcggaagacaaggag
atggtgacaaccgtgaagggcgtcatcaaagctgtgctggatggagtgaaggaactagtg
aggctaaccattgagaagcaggggcggccatcaccaacaagcccagtgaagcccagttcc
ccagccagcaagcctgatggccagcctgagctccctctgacagaccgagaaatggaaatt
ctgaacaagacgacaagtgtatccccacccactgaactgctcccagactccaccagtgat
gaggttgcaccccccaaacctcctttacctggcatccgggtggttgataacagtccacca
gcattaccacctaagaaaaggcagtctgctccatcgcctacccgagtggctgtggtggcc
cccatgagtcgggctaccagcggctccagtttgcctgttggaatcaataggcaggacttt
gatgttgaatgttactcccagaggcgcctgtcaggaggcagccgctcctgcggtggtgag
tctcctcgcttgtccccctgcagcagcacgggcaagctcagccggtcagacgagcagctg
tcctccctagacagggatagcgggcagtgctcacggaacacaagctgtgaaacactagat
cactatgaccctgactatgagttcctccagcaagacctctccaatgcagaccagacccct
ccacaggcagcctgtagcctcagcccgctgccggagtccctgggggaatccgggcctcca
tttcttggccaccctttccagctgcctcctcagcaggagggacagcagacagacactcca
cctgcccttcctgagaagaagcgtaggagtgcagtctcccagaccacggacagctctggc
tgcagggtgtcctatgagcgacacccctcgcagtacgacaacatctcagagggtgacctg
cagaacccagtccagcctgtgccctacccgccctttgctgctatcctgccctttcagcag
ggagcttcttccacccctgctgagtttgtgggtgacttcagtgttcctgagtcagcaggt
gacccagagaagccacctcctctaccagagaagaaaaacaaacacatgctggcctacatg
cagctgctggaggactactcagagccgcagccctccgtgttctaccagacgccgcagagc
gagcacatctaccagcagaagaacaggatgctcatggaggtgtacggcttcagcgactcc
ttctgcgggagtgactccacgcaggagctggcccctccacccgctctgccccccaagcag
cggcagctgcaggcctcctatgctgcttcttccttctctgtctcctactgtgtccagcaa
actaaagtggccttcacccccgaggacggcagtgccgctcagggcctcagtgtatccgtg
tctaactcctttctcaaccggcacggcagcttgcctgtgccctcgtacaaatctgtgttt
aggtcttactcccaggacttcatgcctcaccaccaagcctccgtccaacctttccttccg
cctacctcctcttcctctccacattttccccctgtccacgcgtcgcagagctcggactta
gcggtgcccaccgtaagcagtccgcctcccagcaccgtggacgggcctctctcgtctgct
caggacagcagctctcacaggaaccctgtccgccttccttctgaaacctctttcagtgac
tcggaactgccatctggaaaggatggacatcccagagatccttcagtcagcagtgcatct
gggagggacagcagagaaaacggggagaggtccccaaagtcactggatggtctggagtca
gcccaggcagaagaggaagtggatgaactgtctctcattgaccacaatgaaattatggcc
aggctgacactcaagcaagagggtgatgatgggccagatgttcgtggaggttcaggagac
atcttactggtccatgctactgagacagacagaaaagacctggtactgtactgtgaagcc
ttcctgaccacctacaggaccttcatcagccccgaggagctcatcaagaagctgcagtac
cgatacgagaagttctctccctttgctgacacgttcaagaagcgagtgagcaagaacaca
ttctttgtgctggtgcgggtggtggatgaactctgcctggtggagctgactgaggagatc
ctgaagctgctgatggagctagtcttccgcctagtgtgcagcggagagctcagcctggcc
agagtactccggaagaacattctggacaaagtggaccagaagaagctgctcaggtgtgcc
cattccgaccagcctctggcagccaggggtgttgcagccaggccaggaaccttgcatgat
ttccacagccacgagatagccgagcagctgacactgctggatgctgagcttttctataag
atagagattcctgaagttttgctttgggccaaagagcaaaatgaagagaagagccccaat
ctgacccagttcacagagcacttcaacaacatgtcctactgggtacggtctatcatcatg
ctgcaggagaaggcccaggaccgggagaggctgctcctcaagttcatcaagatcatgaag
cacctgcgcaagctcaacaatttcaactcctacctggccatcctctcagcactagactca
gcccccatccgcagactggagtggcagcggcagacctcagagggcctggctgagtactgc
acattgattgacagctcatcctccttccgagcctaccgggctgccctctcagaggtggag
cctccatgtatcccgtacctaggtctgatcctgcaagacctgacctttgttcacctggga
aacccagattatattgacgggaaagtcaacttctccaagcggtggcaacagttcaacatc
ctggacagcatgcggtgcttccagcaggcgcactatgaaatccggagaaacgacgacatc
ataaacttcttcaatgacttcagcgaccacctggccgaggaagccctatgggaactctct
ctgaagatcaagcctaggaacataacaaggcggaaaacagaccgtgaagagaagacctag
DBGET
integrated database retrieval system
