Arvicanthis niloticus (African grass rat): 117703012
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Entry
117703012 CDS
T08817
Symbol
Gcnt1
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
KO
K00727
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [EC:
2.4.1.102
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00512
Mucin type O-glycan biosynthesis
anu01100
Metabolic pathways
Module
anu_M00056
O-glycan biosynthesis, mucin type core
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
117703012 (Gcnt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
anu01003
]
117703012 (Gcnt1)
Enzymes [BR:
anu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.102 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
117703012 (Gcnt1)
Glycosyltransferases [BR:
anu01003
]
Glycan extension
O-Glycan
117703012 (Gcnt1)
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GFIT
Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
117703012
NCBI-ProteinID:
XP_034350374
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Position
1:complement(125343465..125380659)
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AA seq
428 aa
AA seq
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MLRNLFRRRLFSYPTKYYFMVLVLSLITFSVLRIHQKPEFVSVRHLELAGDDPHSNVNCT
KVLQGDPEEIQKVKLEILTVQFKKRPRWTPHDYINMTRDCASFIRTRKYIMEPLTKEEVG
FPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDKKAEESFLAAVLGIASCFDNVFVAS
QLENVVYASWSRVKADLNCMKDLYRMSANWKYLINLCGMDFPIKTNLEIVRKLKSFTGEN
NLETEKMPPNKEERWKKRYTIVDGKLTNTGVVKEQPPLKTPLFSGSAYFVVSREYVGYVL
ENENIQKFMEWAQDTYSPDEFLWATIQRIPNVPGSLPSSHKYDLSDMNAVARFVKWQYFE
GDVSNGAPYPPCNGVHVRSVCIFGAGDLSWMLHKHHFFANKFDMDVDPFAIQCLDEHLRH
KALEALEH
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaaacttgtttcggaggagacttttttcttatcctacaaaatactactttatg
gttcttgttctctctctaattactttctctgttttaagaattcaccagaagcctgaattt
gttagtgtcagacacttggagctcgctggagacgatccccatagcaatgttaattgcacc
aaagttttacagggtgacccagaagaaatccagaaggtgaagcttgagatactaacagtg
caattcaagaagcgccccaggtggacaccgcatgattatataaacatgacccgtgactgt
gcctctttcatcaggacacgcaaatatattatggagccccttactaaagaagaagtaggc
tttccaattgcatattccatagtggttcatcataagattgaaatgcttgacaggctcctg
agggccatctatatgcctcagaatttctactgcattcacgtggacaaaaaagcagaggaa
tcctttttagccgcggtgctgggcatcgcatcctgctttgataatgtctttgtggccagc
cagttggagaatgttgtttatgcatcctggagtcgagttaaggctgacctcaactgcatg
aaggacctgtatagaatgagtgcaaactggaagtacctgatcaatctttgtggtatggat
ttccctattaaaaccaacctggaaattgtcaggaagctcaagtccttcacaggggaaaac
aacctggaaactgagaagatgcctcccaacaaggaagagagatggaaaaaacgatacacc
attgttgatggaaagctgacaaacactggagtagtcaaagagcagcctccactcaaaacc
cctctcttttcaggcagtgcctacttcgtggtcagtagggaatatgtaggctatgtgctg
gaaaatgaaaatattcaaaagttcatggaatgggcacaggacacatacagcccagatgag
ttcctctgggctaccatccagaggatccccaacgtccctggctctctcccctcaagccat
aagtatgacttgtctgacatgaatgctgtcgctaggtttgtcaagtggcaatacttcgaa
ggtgatgtttccaatggcgcaccttatccaccgtgcaatggagtccatgtgcgctctgtg
tgcattttcggagctggtgacttgagctggatgctgcacaagcatcacttttttgccaat
aagtttgacatggatgtcgacccctttgccatccagtgtttggatgagcatctgaggcat
aaagccctggaggccttagaacactaa
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