KEGG   Arvicanthis niloticus (African grass rat): 117703026
Entry
117703026         CDS       T08817                                 
Symbol
Tsc1
Name
(RefSeq) hamartin isoform X1
  KO
K07206  tuberous sclerosis 1
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04072  Phospholipase D signaling pathway
anu04140  Autophagy - animal
anu04150  mTOR signaling pathway
anu04151  PI3K-Akt signaling pathway
anu04152  AMPK signaling pathway
anu04211  Longevity regulating pathway
anu04218  Cellular senescence
anu04714  Thermogenesis
anu04910  Insulin signaling pathway
anu05163  Human cytomegalovirus infection
anu05165  Human papillomavirus infection
anu05168  Herpes simplex virus 1 infection
anu05231  Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:anu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04072 Phospholipase D signaling pathway
    117703026 (Tsc1)
   04151 PI3K-Akt signaling pathway
    117703026 (Tsc1)
   04152 AMPK signaling pathway
    117703026 (Tsc1)
   04150 mTOR signaling pathway
    117703026 (Tsc1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    117703026 (Tsc1)
  09143 Cell growth and death
   04218 Cellular senescence
    117703026 (Tsc1)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    117703026 (Tsc1)
  09149 Aging
   04211 Longevity regulating pathway
    117703026 (Tsc1)
  09159 Environmental adaptation
   04714 Thermogenesis
    117703026 (Tsc1)
 09160 Human Diseases
  09161 Cancer: overview
   05231 Choline metabolism in cancer
    117703026 (Tsc1)
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117703026 (Tsc1)
   05163 Human cytomegalovirus infection
    117703026 (Tsc1)
   05165 Human papillomavirus infection
    117703026 (Tsc1)
SSDB
Motif
Pfam: Hamartin
Other DBs
NCBI-GeneID: 117703026
NCBI-ProteinID: XP_034350320
LinkDB
Position
2:5902019..5951865
AA seq 1155 aa
MAQLANIGELLSMLDSPTLGVRDDVTTIFKESLNSERGPMLVNTLVDYYLETNSQPVLHI
LTTLQEPHDKHLLDKINEYVGKPATRLSILSLLGHVVRLQPSWKHKLSQAPLLPSLLKCL
KTDTDVVVLTTGVLVLITMLPMIPQSGKQHLLDFFDIFGRLSSLCLKKPGHVTEVYLVHL
HASVYALFHRLYGMYPCNFVSFLRSHYSMKENVETFEEVVKPMMEHVRIHPELVTGSKDH
ELDPRRWKTLETHDVVIECAKISLDPTEASYEDGYSVSHQLSACFPHRSADVTTSPYVDT
QNSYGGPTSTPSSTSRLMFSPPGQLPQSLSFLSTRPLPEPQQASLWSPSAICGMTTPPTS
PGNVPADLSHPYSKAFGTTGGKGTPSGTPATSPPPAPPCPQDDCVHGPASQTSATPPRKE
ERTESSRPYVHRQLNDREDLGSKSSVTLRNLPDFLGDLASEEDSIEKDKEEAAISKELSE
ITTAEADPVVPRGGFDSPFYRDSLSGSQRKTHSAASGTQGSSVNPEPLHSSLDKHGPDTP
KQAFTPIDPPSGSADASPAGDRDRQTSLETSILTPSPCKIPPQRGVSFGSGQLPPYDHLF
EVALPKTACHFVSKKTEELLKKVKGNPEEDCVPSTSPMEVLDRLIEQGAGAHSKELSRLS
LPSKSVDWTHFGGSPPSDEIRTLRDQLLLLHNQLLYERFKRQQHALRNRRLLRKVIRAAA
LEEHNAAMKDQLKLQEKDIQMWKVSLQKEQARYSQLQEQRDTMVTQLHSQIRQLQHDREE
FYNQSQELQTKLEDCRNMIAELRVELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFL
NRQLLVLGEVNELYLEQLQSKHPDTTKEVEMMKTAYRKELEKNRSHLLQQNQRLDASQRR
VLELESLLAKKDHLLLEQKKYLEDVKSQASGQLLAAESRYEAQRKITRVLELEILDLYGR
LEKDGRLRKLEEDRAETAEAAEERLECCSDGCSDSLVGHNEEASGHNGETRTSRPGGTRA
SCGGRVTGGSSSSSSELSTPEKPPSQRFSSRWEPTMGEPSSSIPTTVGSLPSSKSFLGMK
ARELFRNKSESQCDEDGVAMSSSLSETLKTELGKDSAMENKTSLNLDVPHPSSPNSDSVG
QLHIMDYNETHHEHS
NT seq 3468 nt   +upstreamnt  +downstreamnt
atggcccagctagccaacattggggagctactctccatgctggactctcccacactgggt
gtgcgggatgacgtgacaaccatcttcaaggagtccctcaattctgaacgtgggcctatg
cttgtgaacacgttggtggattattacctggaaaccaattctcagccagtattgcacatc
ctgaccaccttgcaggagccacatgataagcacctcttggacaaaattaatgagtatgta
ggcaaacctgccacccgtttatccatcctctcgctgctgggccatgttgtgagactgcag
ccatcttggaagcataagctctctcaagcacctcttctgccttctttattgaaatgtctc
aagacggacactgatgtggtggtcctcacaactggtgtcttggtgttgatcaccatgcta
ccaatgatcccgcagtcaggaaagcagcaccttctcgacttctttgacatctttggccgt
ctctcatcattgtgcctgaagaaaccaggccatgtgacagaagtctacctggtccatctc
cacgccagtgtttatgccctctttcatcgcctttatgggatgtacccttgtaacttcgtc
tccttcctgcgctctcactatagtatgaaggaaaacgtggagacttttgaagaagtggtc
aagccaatgatggagcatgtgcgaattcacccggaattagtgactggatccaaggaccat
gaactggaccctcgaaggtggaagacattggaaactcatgatgttgtaatagagtgtgcc
aaaatctctctggaccctacagaagcctcgtatgaagatggctattctgtgtctcaccag
ctctctgcctgcttccctcaccgttcagctgatgtcaccaccagcccttatgtggacaca
cagaatagctatgggggcccaacttccaccccttcctccacgtctcggctgatgttcagt
ccacctgggcagctacctcagagtttaagtttcctatccacacggccgttacctgagcct
cagcaagctagtctttggagcccatctgccatctgtggaatgaccactcctcctacgtct
cctggaaatgtcccagctgatttgtcacatccatacagtaaagcctttggtaccaccggt
ggaaaaggaactccttcgggaaccccagcgacctctcctcctccagccccgccttgtccc
caagatgactgtgtgcacggtccagcctcccagacctcagcaacacccccaaggaaggaa
gaaagaacagagtcctcaaggccttatgttcacagacagttgaacgaccgagaggatctt
ggaagcaaaagctctgttactctgaggaatctacctgatttcctaggtgacctggcttct
gaggaagacagtatagagaaagataaggaagaagctgcgatatctaaagagctttctgag
atcaccactgcagaggcggatcctgtagttcctcgagggggctttgactctcccttctac
cgagacagtctctctggttctcagcggaagactcattcggcagcctctgggactcagggc
tccagcgtgaaccctgagcctttgcactcctccctggacaaacatgggcctgacacacca
aagcaagcctttactcccatagacccaccctctggcagtgctgatgccagtcccgctggg
gatagggatcgccagacttctctggaaaccagtatcctcactcccagcccttgcaaaatt
ccacctcagaggggagtgagctttggaagtgggcaacttcccccatatgatcatctcttt
gaggtggccttgccaaagactgcctgtcactttgtcagcaagaagactgaggagctgttg
aagaaagtgaaaggaaaccctgaggaagactgtgtgccctctacctccccaatggaagta
ctggacagactgatagagcagggagcaggtgcgcacagcaaggagctgagcaggttgtcc
ttgcccagcaagtctgttgactggacccactttggaggctctcctccctcagatgagatc
cggaccctccgagaccagctgcttttactgcacaatcagctgctgtatgagcgcttcaag
cggcagcagcatgcactcaggaacagaaggctcctgcgcaaggtgatcagagcagctgct
ctggaggaacacaatgcagcaatgaaagatcagttgaagttacaagagaaggacatacag
atgtggaaggtgagtctgcagaaagaacaagcccgatacagtcaacttcaggaacaacgt
gacaccatggtgacccaactgcatagccagatcagacagctgcagcatgaccgagaagaa
ttctacaaccagagtcaggagttacagacaaagctggaggactgcagaaacatgattgcg
gaacttcgggtggagctgaagaaggccaacaacaaggtgtgccacactgagctgctgctc
agccaggtttctcagaagctctccaatagtgagtcagtgcagcagcagatggagttcttg
aataggcagctcctggtgctcggggaggtcaatgagctgtacctggagcagctgcagagc
aagcatcctgacaccaccaaggaagtagaaatgatgaaaactgcatatcggaaagaacta
gagaaaaacagaagccaccttctccagcagaaccagaggctggatgcctcacagaggcgt
gttttggaactggaatctcttctggccaagaaagaccaccttctcctagagcagaagaaa
tatcttgaggatgtcaagagccaggcgagtggacagctgctggctgcagagagcaggtat
gaggctcagagaaagatcacccgggtgttggaactggagattctagacttatatggcaga
ttggagaaagatggccgtctacggaaactagaagaagacagagcagagacagcagaggca
gcagaagagaggcttgagtgttgtagtgacggatgctcggattccttggtaggacataat
gaagaggcttctggtcacaacggtgagaccaggacctccagacctggtggcacccgggcc
agctgtggaggtagagtcactggaggcagcagcagcagcagcagtgagctttccactcca
gagaaacccccgagccagaggttcagcagccggtgggaacccacaatgggagagccctcc
agcagcatccccaccactgttggctcacttcccagttccaaaagcttcctgggcatgaag
gcccgggagctgttccgtaataagagtgagagccagtgtgatgaggacggcgtggccatg
agcagtagcctttctgagaccctgaagacagaactgggcaaagactcggccatggaaaac
aagacttccctgaatctagacgtcccacacccatcttccccaaactcagacagtgtgggg
cagctccacatcatggactacaatgagactcaccacgagcacagctga

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