Arvicanthis niloticus (African grass rat): 117703065
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Entry
117703065 CDS
T08817
Symbol
Ttc21b
Name
(RefSeq) tetratricopeptide repeat protein 21B
KO
K19673
tetratricopeptide repeat protein 21B
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
117703065 (Ttc21b)
Cilium and associated proteins [BR:
anu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
117703065 (Ttc21b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_2nd
ARM_TT21_C
ARM_TT21_N
ARM_TT21_5th
ARM_TT21
ARM_TT21_4th
TPR_19
TPR_14
TPR_2
TPR_16
TPR_1
TPR_8
TPR_12
TPR_11
ANAPC3
TPR_6
TPR_7
CFAP70_TPR_C
TPR_CcmH_CycH
TPR_17
TPR_9
CFAP70_mid_TPR
TPR_21
PknG_TPR
TPR_Slam
DUF6584
SPOB_a
TPR_Psidin_N
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
117703065
NCBI-ProteinID:
XP_034350418
LinkDB
All DBs
Position
2:complement(41975086..42041630)
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AA seq
1315 aa
AA seq
DB search
MDSQGLKTLINYYCQERYYHHVLLVASEGMKKYSSDPVFRFYHAYGTLMEGKAQEALREF
EAIKNKQDVSLCSLMALMYVHKMSPNPDREAILELDTKMKEQRKEAGRKALYHAGLFLWH
IGRHDKAREYIDRMSKMPHDSNEGPVLKAWLDITRGKEPYAKKALRYFEEGLQDGNDIFA
LLGKVLCLEMRQNYSGALETVSQIIVNFPSFLPAFEKKMKLQLALQDWDQTVETAQRLLL
QDSHNVEALRMLALYYLCREGDIEKAATKLENLGNALDVMEPQNAQLFYKITIAFSRTCG
RNQLILQKVQSFLEKAFSLTPQQAEIATELGYQMILQGKIKEAWKWYRTAMTLNESNISA
VTGLIRCQLIEGQLQDADQQLEFFSEFQQSMGKSAELMYLHAVLATKKNYRQDEVINLLN
DVVNIHFSHLEDLPLGIQYFEKLNPDFLLEVVTEYLNLCPIQPAGPGQPLSPVLRRCSSV
LETIIRSVPGLPQAVFLMAKVKYLSGDTEAAYNNLQHCLEHSPSYAEAHLLMAQVYLSQD
KVNLCSQSLELCLSYNFNVRDYPLYHLIKAQSQKKMGEIAEAIKTLHMAMNLPGMRRSRA
SSKSKHRTEVDASHRLSIFLELVEVHRLNDEQHEAAKVLQDAIHEFSGTCEELRVTIANA
DLALAQGDTERALSMLRNVTTEQPYFIEAKEKMADIYLKHRKEKMLYITCYREIAERMPS
PRSFLLLGDAYMNIQEPEEAIVAYEQALNQNPKDGTLARKIGKALVKTHNYSKAITYYEA
ALKSGQQTCLCYDLAELLLRLKLYEKAEKVLQHSLAHEPVNELSALMVDGRSQVLLAKVY
SKMERPDDAIAALQQARELQARILKRVQMEQPDAVPSQKHFAAEICAEIAKHSAAQRDYE
KAITFYREALVHCETDSKIMLELAQLYLAQEDLHASLRHCAQLLQKDQDNEPATMLMADL
MFRKQDYEQAVFHLQQLLERKPDNFMTLSRLIDLLRRCGKLDDVPRFFLMAEKHNSRTKL
EPGFQYCKGLHFWYTGEPNDALRHFNKARKDSDWGQNALYNMIEICLNPDNETIGGEVFE
NLNGDLGTSPEKQESVQLAVRTAEKLLKELKPQTVQGRLQLRIMENCCLMATKQKSSVEQ
ALNTFTEIAASEKDHIPALLGMATAYMILKQTPKARNQLKRIAKMPWNPIEAEDLEKSWL
LLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMGYIMEKEQAYTDAAFNYEMAWKHS
NQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPTYPKIRKDILDKARASLRP
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggactcccaggggctgaagacactgattaattactattgtcaagagaggtattatcac
catgtgctccttgtcgccagtgaagggatgaagaagtacagcagtgatccagtcttccgc
ttttaccatgcttacggcacgctgatggagggtaaagctcaagaagctcttcgggagttt
gaggccattaaaaataaacaagatgtgtcactgtgttctttgatggcactgatgtatgtc
cataaaatgagccccaatccagatagagaagctatcctggaattagataccaaaatgaag
gagcaacggaaagaagccggacgcaaagccttgtaccacgcaggcctttttttatggcac
attggtcgccatgataaggcgagagaatatatcgacagaatgtcaaaaatgccacatgat
agcaacgagggacccgttttgaaagcctggcttgatattacaagagggaaggaaccttat
gctaaaaaagccctacggtactttgaggagggattacaagacggaaacgatattttcgct
ctgctgggtaaggtactgtgcctggagatgcgacagaactattccggagctctggagacc
gtaagccaaataattgtaaactttccgagcttccttcctgcttttgagaagaaaatgaaa
ttacaactggctttgcaggactgggatcagacagtggagacagcacaaaggctgctgctt
caggacagtcacaatgtggaggcactgagaatgctggctttatattatttgtgtagggaa
ggggacatagagaaggctgctacaaagctggaaaatttaggaaatgcattggatgtcatg
gaaccacagaatgctcaacttttctataagattacaatagccttcagcagaacctgtgga
cgtaatcaactcatccttcaaaaagttcaaagtttcctagaaaaagcatttagcttaacc
cctcagcaagcagaaatcgctacagagctcggctaccaaatgattctccaaggcaaaatt
aaggaggcctggaagtggtacaggaccgccatgacgctgaatgagagcaacatctccgcc
gtcaccggacttatccgatgtcagttaatagaagggcagttgcaagatgcagaccagcaa
ttggagttcttcagtgaattccagcagtcaatgggaaaatccgcggaattaatgtatttg
catgcggttcttgctacaaaaaaaaattatcgtcaagacgaagttataaatttgttgaat
gatgtcgtgaacattcacttttcacacttggaagacctccctctcggcatacagtatttt
gagaaactcaaccctgacttcttactagaagttgttactgagtacctgaatctctgtcca
attcagcctgcaggtcctggacaacctctttctccagtcctcagacgttgttcttccgtc
ctggagacgattataagaagtgtaccaggtcttccccaagctgtcttcttaatggccaaa
gtgaagtatttgtcaggtgacactgaggcggcatacaacaacctgcagcactgcctggag
cacagcccctcctatgcagaggctcacctcctgatggctcaggtgtacctgtcccaagac
aaagtcaacctctgttctcagtcacttgaactgtgtctgagctacaattttaatgtgaga
gactacccactatatcatttaatcaaagcacagtcacaaaagaaaatgggagaaatagca
gaagcgattaagactctgcacatggcaatgaacttgccaggaatgaggagaagtagagcc
tcctcgaagtcaaagcacagaactgaggtggacgcgagccatcgcttgtccatcttcctg
gagttggtggaggttcaccgcttaaatgacgagcagcatgaggcagcaaaggttttacag
gacgccatccatgagttttctggaacttgtgaagaattacgtgtcacaattgctaatgca
gacctggctctggcccagggagatacggagcgtgcattaagcatgcttcgaaatgtcaca
accgaacagccttattttatagaggccaaagaaaagatggcagatatttatctgaagcat
aggaaagagaaaatgttgtatatcacttgttacagagaaattgctgaaagaatgcccagc
ccccggtctttcctgcttctcggtgatgcatacatgaacattcaagagcctgaagaagcc
atcgtggcctatgagcaagcattgaatcagaacccaaaagacgggacgctggcgagaaag
attggaaaagcacttgtcaaaactcacaattactcaaaggcaatcacctattatgaagct
gctctgaaaagtggacagcagacttgcctttgctatgacctggccgagctcctactgaga
ctgaagttgtacgagaaagcagagaaagttctccagcattctctagctcatgagcctgta
aacgagttgtcggctctcatggtggatgggcggtcccaagtccttctagcaaaagtgtat
tctaaaatggagagacccgacgacgcgattgccgcactacagcaggctcgagaactgcag
gctcggatattgaagcgagttcagatggagcagccagatgcagttccttcacagaaacac
ttcgcagctgaaatttgtgcagagattgcaaaacactctgctgctcagcgagactatgaa
aaagcaattacattttatagagaggccctggttcattgtgaaacagatagtaagataatg
ttggaactggcacagttatacctggcccaagaagacctccatgcctccctgcggcactgc
gcacagcttctccagaaggaccaggacaatgagcccgccaccatgttgatggccgacctc
atgttcagaaaacaggactatgaacaagcagtgtttcatttgcaacaacttttagaacga
aaaccagataattttatgactttgtctcgtttgattgatctcctgagaagatgtgggaaa
cttgatgatgttccgagatttttcttgatggctgagaaacacaactccagaacaaaattg
gagccaggatttcagtactgtaaaggattacatttttggtatactggagaaccaaatgat
gcccttcgacattttaataaagctcggaaagatagtgactggggtcaaaatgcactttat
aatatgatagaaatctgcttgaatccagacaatgaaactatcggaggtgaagtgtttgaa
aacctgaatggagacctgggcacttccccggagaagcaggagtctgtgcagttggcagtg
aggacggcagaaaaactccttaaggaactaaagcctcagaccgtccagggccgcctgcaa
ctccgcataatggaaaactgctgcctaatggccaccaaacagaagtcgagcgtggagcag
gcactgaacaccttcactgaaatagcagcctctgagaaggatcatatcccagctctcctg
ggaatggcaacggcttatatgatcttgaaacagactccaaaagccagaaaccagctgaag
cggattgccaaaatgccatggaatcctattgaagccgaggatctggagaagagctggctg
ctgcttgctgatatttatattcagtcagcaaaatatgacatggcagaagaattactaaaa
cggtgtctgtgccataaccggtcctgctgcaaagcttatgaatatatggggtacattatg
gagaaagagcaagcatatacagatgcagccttcaactatgagatggcatggaagcatagc
aaccagacaaatcctgccgtgggatacaaattggcattcaattacttaaaagcaaaacga
tatgtggatgcaattgacgtatgtcaccaggttcttgaagcacatccaacttaccccaaa
atcagaaaggatatacttgataaggcacgagcatcgttaagaccttga
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integrated database retrieval system
