Arvicanthis niloticus (African grass rat): 117703069
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Entry
117703069 CDS
T08817
Name
(RefSeq) sodium channel protein type 1 subunit alpha
KO
K04833
voltage-gated sodium channel type I alpha
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
117703069
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117703069
Ion channels [BR:
anu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117703069
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
FUT8_N_cat
Zip
Pns11_12
PFF1_TM
FraC
Motif
Other DBs
NCBI-GeneID:
117703069
NCBI-ProteinID:
XP_034350426
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All DBs
Position
2:complement(42053048..42130825)
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AA seq
1997 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNASFEEHSIEKNITTDN
NGTLVNETIFEFDYKSYVQDSRYHYFLEGVLDALLCGNSSDAGQCPEGYMCVKAGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAVAATASEHSREPSAAGRLS
DSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDDDEFHKSESEDSIRRKGFRFSIEG
NRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPPNGKMHSTVDCNGVVSLVGGPSVP
TSPVGQLLPEGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASILTNTVEELEESR
QKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYP
MTDHFNNVLAVGNLVFTGIFTAEMFLKVIAMDPYYYFQEGWNIFDGFIVTLSLVELGLAN
VEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQL
FGKSYKDCVCKIATDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLTV
FMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMHKGIAYVKRKIY
EFIQQSFVRKQKILDEIKPLDDLNNRKDNCISNHMTEIGKDMDCLKDVNGTTSGIGTGSS
VEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEESKEKLNESSSS
SEGSTVDIGAPAEEQPVMEPEETLEPEACFTEGCVQRFKCCQISVEEGRGKQWWNLRRTC
FRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILEMLLKW
VAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFE
GMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGDMFEITEVN
NHSDCLKLIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAAVDSRNVELQP
KYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSDYVTL
ILSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVS
PTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSN
FAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPNKVNPGSS
VKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEV
WEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGDRIHCLDILFAF
TKRVLGESGEMDALRIQMEERFMASNPSKVSYQPITTTLKRKQEEVSAIIIQRAYRRHLL
KRTVKQASFTYNKNKLKGGANLVKEDMLIDRINENSITEKTDLTMSTAVCPPSYDRVTKP
IVEKHEQEGKDEKAKGK
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcaacttcttcaccagagaa
tctcttgcagctattgaaaggcgcattgcagaagaaaaggctaagaatcccaagccagac
aaaaaggatgatgacgaaaatggcccaaagccaaatagtgacttggaagctgggaagaac
cttccatttatctatggagacattcctccagagatggtgtcggagcctctggaggacctg
gacccctactatatcaataagaaaacttttatagtattgaataaagggaaggccatcttc
cggttcagtgccacttccgccctgtacattttaacgcccttcaatcctcttaggaaaata
gctattaagattttggtacactcattattcagcatgttaattatgtgcactattttgaca
aactgtgtatttatgacaatgagtaaccctccggactggacgaagaatgtagagtacacc
ttcacaggaatatatacttttgagtcactgataaaaattattgcaaggggcttctgttta
gaagattttactttccttcgtgacccatggaactggctggacttcactgtcattacattt
gcatacgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacgttcagagtt
cttcgagcattgaaaactatttcagtcattccaggcctgaagaccattgtgggggccctg
atccagtcagtgaagaagctgtctgatgtcatgatcctcactgtgttctgtctgagtgtc
tttgctctaatcgggctgcagctcttcatgggcaacctgaggaataaatgtgtacaatgg
cctcccaccaacgcttcctttgaggagcacagcatagagaagaatataactacagataac
aatggcacacttgtaaatgaaaccatatttgaatttgactataaatcatacgttcaagac
tcaagatatcattatttcctggagggtgttttagatgcactactgtgtggaaatagctct
gatgcagggcaatgtccagaaggatatatgtgtgtaaaagctggtcgaaaccctaattat
ggttacacaagctttgataccttcagttgggcatttttgtccctgtttcgactgatgact
caggacttctgggaaaatctttaccaactgacattacgtgcagctgggaaaacctacatg
atattttttgtgcttgtgattttcctgggctcattctacctgataaacttgatcctggct
gtggtggccatggcctatgaagagcagaaccaggctacgttggaggaggcggagcagaag
gaggcggagtttcagcagatgctggagcagcttaagaagcaacaggaggctgcacagcag
gcagtggctgcaacagcatcagaacattccagggagcccagtgcagcaggaaggctctca
gatagctcttcagaagcctccaagttaagttcgaagagtgctaaagaaagaaggaatcgg
aggaagaaaaggaaacagaaagagcagtctggaggggaagagaaagatgatgatgaattc
cacaaatctgagtctgaagacagcatcaggaggaaggggtttcgcttctccatagaaggg
aataggctgacatatgaaaagaggtactcttccccacatcagtctttgttgagcattcgt
ggttccctgttttccccaagacgcaatagcagaacaagccttttcagctttagagggcga
gccaaggatgtggggtctgagaatgattttgctgatgatgaacacagcacctttgaggat
aatgagagccggagagactcattgtttgttccccgaagacacggagaacgccgcaacagt
aatctgagccaaaccagcaggtcctcccgaatgctggcagtgtttccaccaaatgggaag
atgcacagcacagtggattgcaatggtgtggtttccttggttggtggaccctcagttcct
acatcgccagttggacagcttctgccagagggaacgaccactgagactgagatgagaaag
aggaggtcaagttctttccatgtttccatggactttctggaagatccttcccagaggcaa
cgagcaatgagtatagccagcatcttaacaaacacagtggaagaactagaagaatccagg
cagaagtgtccaccctgttggtataaattttctaacatattcttaatttgggactgttct
ccatattggctaaaagttaaacatattgtcaacctggttgtgatggacccatttgttgat
ctggccattactatctgtatcgtgttaaatacccttttcatggctatggagcactacccc
atgactgaccatttcaataatgtactcgcagtaggaaacttggttttcactgggatcttc
actgcagaaatgttcctgaaagtcattgccatggacccttactattatttccaggaaggc
tggaatatctttgatggtttcattgtgacactcagcctggtagaacttggccttgccaat
gtggaaggattgtcagttctccgttcatttagactgctcagagtgttcaagttggcaaaa
tcctggcccacactgaatatgctcattaagatcatcgggaactcggtgggcgcactgggc
aacctgaccctggtgttggccatcatcgtcttcatttttgccgtggttggcatgcaacta
tttggcaaaagttacaaggattgtgtctgcaaaattgccactgactgcaaactcccacgt
tggcacatgaatgacttcttccactccttcctgatcgtgttccgggtgctgtgtggagag
tggatagagaccatgtgggactgcatggaggtagcgggccaagctatgtgccttactgtc
ttcatgatggtcatggtgattgggaaccttgtggtcctgaatctctttctggccttgctt
ctgagctcatttagtgcagacaaccttgcagctactgatgatgacaatgagatgaacaac
cttcaaattgccgtggacaggatgcacaaaggaatagcttatgtgaaaagaaaaatatat
gaatttattcaacaatcctttgttaggaagcagaagattctagatgaaatcaagccactt
gatgatctcaacaacagaaaagacaattgtatatctaaccacatgacagaaattggaaaa
gatatggactgtctgaaagatgtgaatggaaccacgagtggcatagggactggcagcagc
gtggaaaagtatatcattgatgagagtgattacatgtcattcataaacaatcccagcctc
actgtgaccgtgcccattgccgtgggagagtctgactttgagaacttaaacacagaggac
tttagcagtgaatctgatctagaagaaagcaaagagaaactcaatgaaagcagtagctcc
tcagagggaagcacggtagacatcggggcgcctgcagaggaacagcctgtcatggaacca
gaagaaacccttgagcctgaggcttgcttcactgaaggctgtgtgcagagattcaagtgc
tgtcaaatcagcgtggaagaaggaagaggcaaacagtggtggaacctacggagaacatgc
ttccgaatagttgaacacaactggtttgaaaccttcattgtgttcatgatcctcctcagt
agtggtgccctggcctttgaggatatatatattgatcaacgaaagaccatcaagaccatg
ctagagtatgctgacaaggtcttcacttacatcttcatcctggagatgcttctaaagtgg
gtggcctatggctatcaaacctatttcaccaatgcctggtgctggctggacttcctgatc
gttgatgtttcattggtcagtttaacagcaaatgccttgggttactctgaactcggggcc
atcaaatccctaaggacactaagagctctgagacccctaagagccttgtcacgatttgaa
gggatgagggtggttgtgaatgccctgctaggagcaattccatccatcatgaatgtgctt
ctggtttgccttatattctggctaattttcagcatcatgggcgtaaatttgtttgctggc
aaattctaccactgtgttaacaccacaactggtgacatgtttgagatcaccgaagtcaat
aatcattctgattgcctaaaactaatagaaagaaatgagaccgcccgttggaaaaatgtg
aaagtaaactttgataatgtaggatttgggtatctttctttgcttcaagttgccacattt
aagggttggatggatatcatgtatgcagcagttgattccagaaacgttgaactacagccc
aagtatgaggaaagcctgtacatgtatctgtactttgtcatcttcatcatctttgggtcc
ttcttcaccctgaacctgtttatcggtgtcattatcgacaatttcaaccagcaaaagaag
aagtttggaggtcaagacatctttatgacagaagaacagaagaaatactataatgcaatg
aagaaattaggatcaaaaaagccacaaaagcctatccctcgacctggaaacaaatttcaa
ggaatggtctttgactttgtaaccagacaagtatttgacatcagcatcatgatcctcatc
tgtctgaacatggtgaccatgatggtggaaacggatgaccagagcgactatgtgacactc
attttgtcacgcattaacctggtattcattgtgctattcactggcgagtgcgtgctgaag
ctcatctccctccgccactattatttcaccattggatggaatatcttcgattttgtggtg
gtcatcctctccattgtaggaatgttccttgctgagctgatagagaagtattttgtgtcc
cctaccctgttccgagtcatccgcctggccaggattggacgaatcctacgactgatcaaa
ggcgccaaggggatccgcacactgctctttgctctgatgatgtcacttcctgccctgttc
aacattggcctcctgcttttcctggtcatgttcatctacgctatctttgggatgtccaac
tttgcctacgttaagagggaagttgggattgatgacatgttcaactttgagacctttggc
aacagcatgatctgcctgttccaaatcaccacctctgcgggctgggatggacttttggcc
cccatccttaacagcaaaccccctgactgtgaccctaataaagttaaccctggaagctcg
gtgaagggggactgtggaaatccatctgtggggattttcttttttgtcagctacatcatc
atatccttcctggttgtggtgaacatgtacatcgctgtcatcctggagaacttcagcgtt
gccactgaagaaagtgcagagcccctgagtgaggacgactttgagatgttctacgaggtc
tgggagaagttcgaccctgacgccactcagttcatggaatttgaaaaattgtctcagttt
gcagctgctcttgaaccccctctcaatttgccacagccaaacaaacttcagctcattgcc
atggacctgcccatggtgagtggagaccgcatccactgcctggacatcttatttgctttt
acaaagcgggtcttgggtgagagcggagagatggatgcccttcgaatccagatggaagag
cggttcatggcttccaatccctccaaggtctcctatcagccaatcaccactacgttaaaa
cgcaaacaggaggaggtgtcagccattatcattcagcgagcttacaggcgccaccttttg
aagcgaacagtaaaacaagcttcattcacatacaacaagaacaaactcaaaggcggggct
aatcttgtaaaagaagacatgctcattgacaggataaatgaaaactctattacagagaaa
actgacctgacaatgtccaccgcagtttgtccgccctcctatgatcgggtgacaaagcca
atcgtggagaaacacgagcaggaaggaaaagatgaaaaagccaaagggaaatga
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integrated database retrieval system
