KEGG   Arvicanthis niloticus (African grass rat): 117703086
Entry
117703086         CDS       T08817                                 
Symbol
Sdc4
Name
(RefSeq) syndecan-4
  KO
K16338  syndecan 4
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04512  ECM-receptor interaction
anu04514  Cell adhesion molecule (CAM) interaction
anu04820  Cytoskeleton in muscle cells
anu05205  Proteoglycans in cancer
anu05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:anu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117703086 (Sdc4)
   04514 Cell adhesion molecule (CAM) interaction
    117703086 (Sdc4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117703086 (Sdc4)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    117703086 (Sdc4)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    117703086 (Sdc4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:anu00535]
    117703086 (Sdc4)
Proteoglycans [BR:anu00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   117703086 (Sdc4)
SSDB
Motif
Pfam: Syndecan Glycophorin_A
Other DBs
NCBI-GeneID: 117703086
NCBI-ProteinID: XP_034350456
LinkDB
Position
2:complement(133599100..133618312)
AA seq 201 aa
MAPACLLAPLLLLLLGGFPVVPGESIRETEVIDPQDLLGGRYFSGALPDDEDAGGLEQDS
DDFELSGSGDLDDTEEPRNFPDVIQPLVPLDNHIPENAQPGIRVPSEPKELEENEVILKR
VPSDGDDVSNKVSMSSTAQGSNIFERTEVLAALIVGGVVGILFAVFLILLLVYRMKKKDE
GSYDLGKKPIYKKAPTNEFYA
NT seq 606 nt   +upstreamnt  +downstreamnt
atggcgcctgcttgcctacttgcgccgctgctgctgctgctcctcggcggcttccccgtc
gtccccggagagtcgattcgagagactgaggtcatagacccccaggacctcctgggaggc
agatacttctctggagctctcccggatgatgaagatgctgggggcctcgagcaggactct
gatgactttgagctatcgggttccggagatctcgatgacacagaagagcccaggaacttc
cctgatgtgattcaacccttggtgccactggataaccatatccccgagaatgcacagcct
ggcattcgtgtcccctcggagcccaaggaactggaagagaatgaggtcattctcaaaagg
gtcccctccgatggggatgacgtatccaacaaagtgtccatgtccagcactgcccagggc
agcaacatctttgagagaactgaggtcttggcagctctgatcgtgggcggcgtggtaggc
atcctcttcgccgtcttcctgatcctgctgctggtgtaccgtatgaagaagaaggatgaa
ggcagttacgacttgggcaagaaacccatctacaaaaaagcccccaccaacgagttctac
gcatga

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