Arvicanthis niloticus (African grass rat): 117703112
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Entry
117703112 CDS
T08817
Symbol
Ubr1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117703112 (Ubr1)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117703112 (Ubr1)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
117703112 (Ubr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
Motif
Other DBs
NCBI-GeneID:
117703112
NCBI-ProteinID:
XP_034350511
LinkDB
All DBs
Position
2:complement(92068439..92180675)
Genome browser
AA seq
1757 aa
AA seq
DB search
MADEEMDGAERMDVSPEPPLAPQRPASWWDQQVDFYTAFLHHLAQLVPDIYFAEMDPDLE
KQEENVQMSIFTPLEWYLFGEDPDICLEKLKHSGAFQLCGKVFKSGETTYSCRDCAIDPT
CVLCMDCFQSSVHKNHRYKMHTSTGGGFCDCGDTEAWKTGPFCMDHEPGRAGTTKETLHC
PLNEEVIAQARKIFPSVIKYIVEMTIWEEEKELPPELQIREKNERYYCVLFNDEHHSYDH
VIYSLQRALDCELAEAQLHTTAIDKEGRRAVKAGVYAACQEAKEDIKSHSENVSQHPLHV
EVLHSVVMAHQKFALRLGSWMNKIMSYSSDFRQIFCQACLIEEPGSENPCLISRLMLWDA
KLYKGARKILHELIFSSFFMEMEYKKLFAMEFVKYYKQLQKEYISDDHERSISITALSVQ
MFTVPTLARHLIEEQNVISVITETLLEVLPEYLDRNNKFNFQGYSQDKLGRVYAVICDLK
YILISKPIIWTERLRSQFLEGFRSFLKILTCMQGMEEIRRQVGQHIEVDPDWEAAIAIQM
QLKNILLMFQEWCACDEDLLLVAYKECHKAVMRCSTNFMSSTKTVVQLCGHILETKSYKV
SEDLVSIHLPLSRTLAGLHVRLSRLGAVSRLHEFVPFDGFQVEVLVEYPLRCLVLVAQVV
AEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASIMDPNKFLLLVLQRYELTDA
FNKTISTKDQDLIKQYNTLIEEMLQVLIYIVGERYVPGVGNVTKEEVIMREITHLLCIEP
MPHSAIARNLPENENNETGLENVINKVATFKKPGVSGHGVYELKDESLKDFNMYFYHYSK
TQHSKAEHMQKKRRKQENKDEALPPPPPPEFCPAFSKVVNLLSCDVMMYILRTIFERAVD
TESNLWTEGMLQMAFHILALGLLEEKQQLQKAPEEEVTFDFYHKASRLGSSAMNAQNIQM
LLEKLKGIPQLEGQKDMITWILQMFDTVKRLREKSCLVVASTSGLESIKSEEITHDKEKA
ERKRKAEAARLHRQKIMAQMSALQKNFIETHKLMYDNTSEVAGKEDSIMEEDSTSAVSES
SRIALGPKRGPAVIEKEVLTCILCQEEQEVKLENNAMVLSACVQKSTALTQHRGKPMDPL
GETLDPLFMDPDLAHGTYTGSCGHVMHAVCWQKYFEAVQLSSQQRIHVDLFDLESGEYLC
PLCKSLCNTVIPIIPLQPQKINSENAEALAQLLTLARWIQTVLARISGYNTKHAKGEAPA
VPVLFNQGMGDSTFEFHSILSFGVQSSVKYSNSIKEMVILFATTIYRIGLKVPPDELDPR
VPMMTWSTCAFTIQAIENLLGDEGKPLFGALQNRQHNGLKALMQFAVAQRTTCPQVLIQK
HLVRLLSVVLPNLQSENTPCLLSVDLFHVLVGAVLAFPSLYWDDTVDLQPSPLSSSYNHL
YLFHLITMAHMLQILLTTETDLSPGLPLVEGEEDSEEARCASALFVEVSQHTDGLTGCGA
PGWYLWLSLRNGITPYLRCAALLFHYLLGVTPPEELFANSGEGEYSALCSYLSLPTNLFL
LFQEYWDTIRPLLQRWCGDPALLNSLKQKSAVVRYPRKRNSLIELPDDYSCLLNQASHFR
CPRSADDERKHPVLCLFCGAILCSQNICCQEIVNGEEVGACVFHALHCGAGVCIFLKIRE
CRVVLVEGKARGCAYPAPYLDEYGETDPGLKRGNPLHLSRERYRKLHLVWQQHCIIEEIA
RSQETNQMLFGFNWQLL
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagagatggacggagccgagaggatggacgtcagtccggagcctcctctg
gcccctcagcggccggcatcgtggtgggatcagcaagttgatttctatactgctttctta
catcatttggcacaattagtgccagacatttattttgctgagatggacccagatttggaa
aagcaagaagagaacgtacaaatgtcaatattcactcctttggagtggtacttatttgga
gaggatccggatatttgcttagagaaattaaagcacagtggagcatttcagttgtgcggg
aaggttttcaaaagtggagaaacgacatattcttgtagggattgtgcaattgatccaacg
tgtgtgctctgtatggactgcttccagagtagtgttcataaaaaccatcgttacaagatg
catacttctactggagggggcttctgtgactgtggagacacagaggcgtggaaaaccggc
cccttttgtatggatcacgaacctggaagagcaggtactacaaaagagaccttgcattgc
ccactgaatgaagaggtaattgctcaagccaggaaaatattcccttctgtgataaaatac
attgtagaaatgactatatgggaagaagaaaaggaattgcctcctgaactgcagataagg
gagaaaaatgaaagatactattgtgtccttttcaacgatgaacaccattcctatgatcat
gtgatatacagtctgcaaagagctcttgactgtgagcttgcagaggctcagttgcacacc
actgccatagacaaagagggtcgccgcgctgtcaaagcaggtgtgtatgctgcttgccag
gaagcaaaggaggatataaagagtcactcagaaaacgtttctcagcaccccctccacgtg
gaagtgctgcactctgtggttatggctcaccagaaatttgctctgcgccttggctcctgg
atgaacaaaattatgagctattcaagtgactttaggcagatattttgccaggcctgcctc
atagaagagcctggctctgaaaatccctgtcttataagcagactaatgctttgggatgca
aaactttataaaggtgcccgtaagatccttcatgaattgatctttagtagtttttttatg
gagatggaatacaaaaaactctttgctatggaatttgtgaagtattataagcaactgcag
aaagagtatatcagtgatgaccatgagaggagtatctccatcactgcgctgtctgttcag
atgtttactgtcccgaccttggcccgacatcttattgaagagcagaatgttatttctgtc
attactgaaactctgctagaagttttacctgaatacttggacaggaacaataaattcaac
ttccagggttatagccaggacaaactgggaagagtgtatgcagtaatatgtgacctaaag
tacatcctgattagcaagcctatcatatggacagaaagattaagatcacagttcctggaa
ggtttccggtcttttctgaagattcttacctgtatgcagggaatggaagaaatcagaaga
caagttggacaacacattgaagtagatcctgactgggaggccgccatcgctatacagatg
caactaaagaatattttactcatgttccaagagtggtgtgcttgtgatgaagatctctta
ctagtggcttataaagaatgtcacaaagctgtaatgaggtgcagtacaaatttcatgtct
agtaccaagacagttgtacaattgtgtggtcatattttggaaaccaaatcctacaaagtg
tctgaggaccttgtaagcatacatctaccactgtctagaactcttgctggtcttcatgta
cgtttaagcagactaggtgctgtttcaagactgcatgaatttgtgccttttgatggcttt
caagtagaggtccttgtggagtaccctttgcggtgtctggtgctggttgctcaggttgtt
gccgagatgtggcgaagaaacggactctctctcattagccaggttttttattatcaagat
gttaaatgcagggaagaaatgtatgataaagatataatcatgcttcagattggagcgtcc
ataatggatcccaacaagttcttgttactggtacttcagaggtatgaacttactgatgct
tttaacaagaccatatccacaaaagaccaggatttgattaaacagtataatacattaata
gaagaaatgcttcaggtcctcatctatattgtgggagagcgttatgtacctggagtggga
aatgttaccaaagaggaggttataatgagagagattactcacttactttgcattgagccc
atgccacacagtgccattgccagaaacctacctgagaatgaaaataacgaaactggctta
gagaatgtcataaacaaagtggccacatttaagaaaccaggtgtgtcgggccatggagtt
tatgaattgaaagatgaatcactgaaagacttcaatatgtacttttaccattattctaaa
acacagcatagcaaggctgaacatatgcagaagaaaaggagaaaacaagaaaataaagat
gaagcactgccgccaccacctcctcctgagttctgccctgctttcagcaaagtcgtcaac
ctgctcagctgtgatgttatgatgtacatcctcaggaccatctttgagcgggcagtggac
acggagtctaacctgtggacagaagggatgctgcaaatggcattccatatattggcactg
ggcttgctggaggagaagcagcagcttcagaaagctcctgaagaagaagtgacttttgac
ttttaccataaggcttcaagattgggaagttcagccatgaatgctcagaatatacaaatg
cttttggaaaaactcaaaggaatcccccaattagaaggccagaaggacatgataacatgg
atactccagatgtttgacacagtgaagcgattaagagaaaaatcttgtttagttgtggca
agcacttcaggattggagtccattaaaagtgaggagattactcatgataaagaaaaggca
gagcggaagagaaaagctgaagctgctaggctccatcgccagaagatcatggcccaaatg
tctgccttacagaaaaacttcattgaaactcacaaactcatgtatgacaatacgtcagaa
gtggcagggaaggaagactccattatggaggaagacagcacctcagcagtaagtgagtcc
tctagaattgctctgggtcctaaacggggccctgctgttatagaaaaagaggtgctgaca
tgcatcctctgccaagaagaacaagaggtgaaactagaaaacaacgccatggtattgtcg
gcctgtgtgcagaaatctactgccttaacccagcacagggggaagcctatggaccccttg
ggggaaacactggaccctcttttcatggacccagacttggcccatggaacttacacagga
agctgtggtcatgtcatgcatgcagtgtgctggcagaagtattttgaagctgtacagctg
agctctcagcagcgcattcacgttgacctgtttgacttggagagcggcgagtacctgtgc
cccctctgcaagtctctctgcaacactgtcatccccatcattcctctgcagccacagaag
atcaacagtgagaatgcagaggctcttgctcaacttttgaccttggcacggtggatacag
actgtccttgccagaatatcaggttataatacgaagcatgctaaaggagaagctccagca
gttcctgtcttgtttaatcaaggaatgggggattctacttttgagtttcattccatcctg
agttttggagttcagtcttcggtaaaatattcaaatagtatcaaggaaatggtcattctc
ttcgccacaacaatttacagaatcggcctgaaagtgcctcctgatgaactagatccacga
gtacccatgatgacttggagcacgtgtgctttcaccatccaggcaattgaaaacctgttg
ggagatgaaggaaaacctctatttggagcacttcaaaataggcagcataatggtctgaaa
gcgttaatgcagtttgcagttgcacagaggactacctgtcctcaggtcctgatacagaaa
catctggttcggctcctgtcagttgttcttcctaacctacaatcagaaaatacaccatgc
cttctatctgtagatctatttcatgttttggtaggcgctgtcttagcgttcccatccttg
tattgggatgacaccgtggatctgcagccttcaccacttagctcttcatataaccacctt
tatctcttccatctgatcaccatggcacatatgcttcagatactccttacaacagagaca
gatctgtctccggggctcccgcttgttgagggtgaagaagacagtgaggaggctcgatgt
gcgtctgctctctttgtggaagtttcgcagcacacagacggcctcactgggtgtggcgct
cccggctggtacctgtggctctccctgaggaacggcattaccccttaccttcgctgtgct
gcattgctcttccactatttacttggagtaactccgcctgaagaactgtttgctaattct
ggtgaaggagaatacagtgcactctgtagctatctatctttgcccacaaatctgttcctg
cttttccaggaatattgggataccataaggcccttactacagaggtggtgtggagatcct
gccttactcaactctttgaagcagaaaagtgctgtggtcaggtaccctagaaaaagaaat
agtttgatagagcttcctgatgactacagctgtcttctgaatcaagcttctcactttagg
tgtccacggtctgcagatgatgaacgaaagcatcctgtcctctgtcttttctgtggggcc
atcctgtgttctcagaacatctgttgccaagaaatagtgaatggggaagaggttggagcg
tgtgtttttcatgcacttcattgtggtgctggagtctgcattttcctaaaaatcagagaa
tgcagagtggtcctggtagaaggaaaagccagaggctgcgcctacccagccccttacttg
gatgaatatggagaaacagacccagggctaaagaggggaaacccacttcatttatctcgg
gagcggtatcggaagctgcatttggtctggcaacagcactgcattatagaagagattgct
cggagccaggagactaatcagatgctattcggattcaactggcagttactctga
DBGET
integrated database retrieval system
