Arvicanthis niloticus (African grass rat): 117703120
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Entry
117703120 CDS
T08817
Symbol
Ssrp1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117703120 (Ssrp1)
03036 Chromosome and associated proteins [BR:
anu03036
]
117703120 (Ssrp1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
117703120 (Ssrp1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
117703120 (Ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117703120
NCBI-ProteinID:
XP_034350527
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All DBs
Position
2:59740043..59749980
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AA seq
709 aa
AA seq
DB search
MAETLEFNDIFQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH
GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGINPGYDDYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDE
SFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMAKDRKSRKRSSEVKK
GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA
EDARREYEKAMKEYEGGRGDLSKRDKSKKKKKVKAKMEKKSTPSRGSSSKSSSRQLSDSF
KSKEFVSSDESSSGENKSKKKRRRSEDSEEEELASTPPSSEDSASGSDE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacattggagttcaacgacatcttccaggaggtgaaagggtccatgaatgat
gggaggcttcgattgagccgccagggtatcatctttaagaacagtaagaccggcaaagtg
gacaacatccaggctggggagttgacggaaggcatctggcgtcgggtagcattaggccat
gggcttaaactgctcacgaagaacgggcatgtctacaagtacgatggcttccgtgaatcg
gagtttgagaaactctctgacttcttcaaaactcactatcgccttgagctaatggagaag
gatctgtgtgtgaagggctggaactggggaacagtgaagtttggtggacagctgctttct
tttgacattggtgatcaaccagtctttgagatacccctaagtaatgtgtcccagtgtaca
acaggcaagaatgaggtgaccctggaattccaccagaatgatgatgctgaagtatctctc
atggaggtgcgcttctatgtccctcccacacaggaagatggtgtggaccctgtggaggcc
tttgcccagaatgttttgtcaaaggcagatgtgatccaggccactggagatgccatctgc
atcttccgggagctgcagtgtttgactcctcgaggtcgttatgatatccggatctaccct
acctttctacacctgcatggcaagacctttgactacaagatcccctatactacagttctc
cgtctcttcctgctgccccacaaggatcagagacagatgttctttgtgatcagcctggat
ccccccatcaagcagggccaaactcggtaccacttcctgatcctcctcttctccaaggat
gaggacatctccttgactctcaacatgaatgaggaagaagtagaaaagcgctttgagggg
cgactcaccaagaacatgtcaggatctctctatgagatggtcagccgggtcatgaaagca
cttgtaaaccgtaaaatcacagtcccaggcaacttccaagggcactcgggggcccagtgt
atcacctgctcctataaggccagctcaggactcctgtaccccctggagcggggcttcatc
tacgtgcacaagccccctgtgcacatccgcttcgatgagatctcttttgtcaactttgcc
cgtggcaccacaaccactcgctccttcgactttgaaattgagaccaagcaaggcactcag
tacaccttcagcagcattgagagggaggagtatggaaagctgttcgattttgtcaatgct
aaaaagctcaacatcaagaacagaggactgaaagagggcattaacccaggttatgacgat
tatgctgactctgatgaagaccagcatgatgcctatttggagaggatgaaggaggagggc
aagatccgggaggagaatgccaatgacagcagtgatgactcgggagaagaaactgatgag
tccttcaatcctggtgaagaagaagaagatgtggcagaggagtttgacagcaatgcctct
gctagctcttctagcaatgagggtgacagtgaccgagaagagaagaagcggaaacagctc
aaaagggccaagatggccaaggatcgaaagagccgcaagaggtcttcagaggtgaagaaa
ggtaaggatccaaatgcaccaaagaggcctatgtccgcctacatgctgtggcttaatgcc
agccgagagaagatcaagtcggaccatcctggcatcagtatcacagatctttccaagaag
gcaggtgaaatctggaagggaatgtccaaagagaagaaagaggagtgggaccgcaaggct
gaggatgctaggagggaatatgaaaaagccatgaaagagtatgaaggaggaagaggggac
ttgtctaaaagggacaagtctaagaagaaaaagaaagtaaaagcaaagatggaaaaaaaa
tccactccctcccggggctcatcatccaagtcttcatccagacagttgagtgacagcttc
aagagcaaggagtttgtgtccagtgacgagagttcttcaggggagaacaagagcaaaaag
aagaggaggcggagtgaggactctgaagaagaggaactagccagtacccctccaagctca
gaggactctgcctcaggatctgatgagtaa
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