Arvicanthis niloticus (African grass rat): 117703269
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Entry
117703269 CDS
T08817
Symbol
Ctcfl
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117703269 (Ctcfl)
03036 Chromosome and associated proteins [BR:
anu03036
]
117703269 (Ctcfl)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117703269 (Ctcfl)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117703269 (Ctcfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-C2H2_15
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-C2H2_7
Zf-C2H2_ZNF451_C
zf-C2HE
C2CH-3rd_BIRD-IDD
DUF7837
Motif
Other DBs
NCBI-GeneID:
117703269
NCBI-ProteinID:
XP_034350616
LinkDB
All DBs
Position
2:complement(142056047..142074600)
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AA seq
653 aa
AA seq
DB search
MAAAEVPVPSGHFTQIKEQKLKPGDLEEEKEEDGLQRVEAQKGAVEEAEAEDSCLLLDAR
PQELPSRAPVESDRRILTLQTVHLASQDVHLQGLGWLSVPHSEELPGTVPQAESILQLPS
VLWFDPEPQLSLQHCVTVSIPEDLYPPEELELMRFHLLQENLPVAEEDQELTPDLDESAA
PKKKPEEDEKDQLLPQGGTDKKEERFFFVEMKPKEGKDEIVLTISHVSLEEQQDPPAVKQ
TSEPKAAAAKPKPRRQKGKPQIFQCDTCPFTSSKLSTFNRHVKIHSDERPHMCHLCLKAF
RTVTLLRNHVNTHTGTRPYKCGDCDMAFVTSGELVRHRRYKHTHEKPFKCSLCTYASVEA
SKLKRHIRSHTGERPFQCCQCDYASKDTYKLKRHMRTHSGEKPYECPTCHTRFTQSGTMK
IHMAQKHGENVPKHECPHCATVIARKSDLRVHLRNMHGHSPVELKCRYCPAGFHERYALI
QHQRTHKNEKRFKCKQCDYASKQERCLTVHMRIHTGEKPFSCLACNKHFRQKQLLTVHLR
KYHDPSFTPNAHLCLKCGKGFSRWSNLQRHRKKCDPEHEKLSSSKNGRPVTRTQASEGGA
GLDEDVAAQESATSGEAQYPEDQALDLQGERAERSQSPLRGLTCEMIFNMMEN
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgctgaggtccctgtcccttctgggcacttcacccagatcaaagagcagaag
ttgaagcccggagacctagaggaggaaaaagaggaggatgggctacaaagagtggaagcc
cagaagggagctgtagaggaggcggaggccgaggacagctgcctgcttctagatgccagg
ccccaggagctgccttcgagggccccagtggagagcgataggcggatcctgaccctgcaa
accgtgcacctggcgtcccaggatgtgcacctacaggggctgggatggctgagtgtgcca
cactccgaggagctgccagggacggtaccacaggcggaaagcatactgcagttgccatcc
gtgctgtggttcgacccagagcctcagctcagccttcagcattgtgtgaccgtcagcatc
ccggaagacctgtacccacccgaggagctggagctgatgcgttttcacctgctgcaggag
aacctgccggtggccgaggaggaccaagagttaacgccagacttagacgaaagcgcggcc
ccgaagaagaagcctgaagaagatgaaaaggaccagctcctgccccagggagggacagac
aagaaagaagagagattcttctttgtggaaatgaaaccaaaagaaggaaaagacgaaatt
gttctgaccatttcccatgtaagcctagaagaacagcaagatccaccagcagtgaagcag
acaagtgagccaaaagccgcagccgcaaagccaaaacctcgaaggcagaagggcaaaccc
cagatcttccagtgcgacacctgcccattcacttcttccaaactctcgactttcaatcgt
cacgtcaaaattcacagcgatgagaggccacacatgtgccacctgtgcctgaaggctttc
cggactgtcactctccttaggaaccatgtcaacacccacacaggaaccaggccctacaag
tgcggagactgcgacatggcatttgtcaccagcggagagctcgtccggcacagacgctac
aaacacactcatgagaagcccttcaagtgctccctgtgcacgtatgccagcgttgaggca
agcaagctgaagcgccacatccgctcacacacgggtgagcgccccttccagtgctgccag
tgtgattatgccagcaaggacacctacaagctgaagcgccatatgcggacacactcaggt
gagaagccgtatgaatgccccacctgtcacacccggttcacccagagcgggaccatgaaa
atccatatggcgcagaagcatggcgagaatgtgcccaaacacgagtgtccccactgtgcc
accgtcattgcgaggaagagtgacctgcgtgtccatctgcgcaacatgcacggccacagc
cccgtggagctcaaatgccgatactgtcccgctggcttccatgagcgctatgccctcatt
cagcaccagaggactcacaagaacgagaagaggttcaagtgcaagcagtgtgattacgcg
agcaagcaggagcgatgcttgaccgtgcacatgcgcatccacacgggagagaagcctttc
tcctgcctggcctgcaacaaacacttccgacagaagcagctacttaccgtgcacctgagg
aagtaccatgacccaagcttcacccccaatgctcacctatgcctcaagtgtggtaaaggt
ttttcccgctggagtaacctgcagagacacagaaagaagtgtgacccggagcatgagaag
ctatcctcctccaagaatggaagaccagtgacaaggacacaggcctcggagggaggagca
ggacttgacgaagatgttgcggcccaggagagcgccacctcgggagaggctcagtatcct
gaggaccaggctctggacctccaaggagaacgcgcagagaggagccagagtccactccga
ggccttacctgcgagatgatctttaacatgatggagaactga
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integrated database retrieval system
