Arvicanthis niloticus (African grass rat): 117703269
Help
Entry
117703269 CDS
T08817
Symbol
Ctcfl
Name
(RefSeq) transcriptional repressor CTCFL isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117703269 (Ctcfl)
03036 Chromosome and associated proteins [BR:
anu03036
]
117703269 (Ctcfl)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117703269 (Ctcfl)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117703269 (Ctcfl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_ZN142
zf-C2H2_REST
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_15
ADNP_N
Motif
Other DBs
NCBI-GeneID:
117703269
NCBI-ProteinID:
XP_076786441
LinkDB
All DBs
Position
2:complement(142056025..142074770)
Genome browser
AA seq
526 aa
AA seq
DB search
MAAAEVPVPSGHFTQIKEQKLKPGDLEEEKEEDGLQRVEAQKGAVEEAEAEDSCLLLDAR
PQELPSRAPVESDRRILTLQTVHLASQDVHLQGLGWLSVPHSEELPGTVPQAESILQLPS
VLWFDPEPQLSLQHCVTVSIPEDLYPPEELELMRFHLLQENLPVAEEDQELTPDLDESAA
PKKKPEEDEKDQLLPQGGTDKKEERFFFVEMKPKEGKDEIVLTISHVSLEEQQDPPAVKQ
TSEPKAAAAKPKPRRQKGRLAIFQCDTCPFTSSKLSTFNRHVKIHSDERPHMCHLCLKAF
RTVTLLRNHVNTHTGTRPYKCGDCDMAFVTSGELVRHRRYKHTHEKPFKCSLCTYASVEA
SKLKRHIRSHTGERPFQCCQCDYASKDTYKLKRHMRTHSGVHLRNMHGHSPVELKCRYCP
AGFHERYALIQHQRTHKNEKRFKCKQCDYASKQERCLTVHMRIHTGEKPFSCLACNKHFR
QKQLLTVHLRKYHDPSFTPNAHLCLKCGKGFSRWVSIHRPQRLPGL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgctgaggtccctgtcccttctgggcacttcacccagatcaaagagcagaag
ttgaagcccggagacctagaggaggaaaaagaggaggatgggctacaaagagtggaagcc
cagaagggagctgtagaggaggcggaggccgaggacagctgcctgcttctagatgccagg
ccccaggagctgccttcgagggccccagtggagagcgataggcggatcctgaccctgcaa
accgtgcacctggcgtcccaggatgtgcacctacaggggctgggatggctgagtgtgcca
cactccgaggagctgccagggacggtaccacaggcggaaagcatactgcagttgccatcc
gtgctgtggttcgacccagagcctcagctcagccttcagcattgtgtgaccgtcagcatc
ccggaagacctgtacccacccgaggagctggagctgatgcgttttcacctgctgcaggag
aacctgccggtggccgaggaggaccaagagttaacgccagacttagacgaaagcgcggcc
ccgaagaagaagcctgaagaagatgaaaaggaccagctcctgccccagggagggacagac
aagaaagaagagagattcttctttgtggaaatgaaaccaaaagaaggaaaagacgaaatt
gttctgaccatttcccatgtaagcctagaagaacagcaagatccaccagcagtgaagcag
acaagtgagccaaaagccgcagccgcaaagccaaaacctcgaaggcagaagggtaggctg
gccatcttccagtgcgacacctgcccattcacttcttccaaactctcgactttcaatcgt
cacgtcaaaattcacagcgatgagaggccacacatgtgccacctgtgcctgaaggctttc
cggactgtcactctccttaggaaccatgtcaacacccacacaggaaccaggccctacaag
tgcggagactgcgacatggcatttgtcaccagcggagagctcgtccggcacagacgctac
aaacacactcatgagaagcccttcaagtgctccctgtgcacgtatgccagcgttgaggca
agcaagctgaagcgccacatccgctcacacacgggtgagcgccccttccagtgctgccag
tgtgattatgccagcaaggacacctacaagctgaagcgccatatgcggacacactcaggt
gtccatctgcgcaacatgcacggccacagccccgtggagctcaaatgccgatactgtccc
gctggcttccatgagcgctatgccctcattcagcaccagaggactcacaagaacgagaag
aggttcaagtgcaagcagtgtgattacgcgagcaagcaggagcgatgcttgaccgtgcac
atgcgcatccacacgggagagaagcctttctcctgcctggcctgcaacaaacacttccga
cagaagcagctacttaccgtgcacctgaggaagtaccatgacccaagcttcacccccaat
gctcacctatgcctcaagtgtggtaaaggtttttcccgctgggtaagcatccatcggcct
caaaggctgccagggctgtaa
DBGET
integrated database retrieval system
