Arvicanthis niloticus (African grass rat): 117703272
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Entry
117703272 CDS
T08817
Symbol
Tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04145
Phagosome
anu04517
IgSF CAM signaling
anu04540
Gap junction
anu04814
Motor proteins
anu05010
Alzheimer disease
anu05012
Parkinson disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05020
Prion disease
anu05022
Pathways of neurodegeneration - multiple diseases
anu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117703272 (Tubb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117703272 (Tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
117703272 (Tubb1)
09142 Cell motility
04814 Motor proteins
117703272 (Tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117703272 (Tubb1)
09164 Neurodegenerative disease
05010 Alzheimer disease
117703272 (Tubb1)
05012 Parkinson disease
117703272 (Tubb1)
05014 Amyotrophic lateral sclerosis
117703272 (Tubb1)
05016 Huntington disease
117703272 (Tubb1)
05020 Prion disease
117703272 (Tubb1)
05022 Pathways of neurodegeneration - multiple diseases
117703272 (Tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117703272 (Tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117703272 (Tubb1)
04147 Exosome [BR:
anu04147
]
117703272 (Tubb1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117703272 (Tubb1)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117703272 (Tubb1)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117703272 (Tubb1)
Exosomal proteins of colorectal cancer cells
117703272 (Tubb1)
Exosomal proteins of bladder cancer cells
117703272 (Tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
117703272
NCBI-ProteinID:
XP_034350619
LinkDB
All DBs
Position
2:143420073..143427184
Genome browser
AA seq
452 aa
AA seq
DB search
MREIVHIQIGQCGNQIGAKFWEVIGEEHGIDCAGSYCGASALQLERISVYYNEAYGKKYV
PRAVLVDLEPGTMDSIRSSRLGVLFQPDNFVHGNSGAGNNWAKGHYTEGAELIENVMDVV
RRESENCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRILNSFSVMPSPKVSDTVV
EPYNAVLSIHQLIENTDACFCIDNEALYDICFRTLRLTTPTYGDLNHLVSLTMSGITTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRAFSVAELTQQMFDARNIM
AACDPRRGRYLTVACIFRGKMSTKEVDQQLLSIQTRNSNCFVEWIPNNVKVAVCDIPPRG
LNMAATFLGNNTAIQELFTRVSEHFSAMFRRRAFVHWYTSEGMDISEFGEAESDIHDLVS
EYQQFQDARAGLEDSEEGGEEGAEMETEDKDP
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatcgtgcacattcagattggccagtgtggcaaccagatcggagccaagttc
tgggaggtgatcggggaagaacatgggattgactgcgccgggagctactgtggggcttct
gctcttcagctggagaggatcagtgtttactacaatgaagcctacggtaagaagtatgtg
ccccgagccgtcttggtggacctggaacccgggacaatggacagcattcgatccagcaga
ttgggagtcctctttcagcctgacaattttgttcatggtaattctggtgctggtaacaac
tgggccaagggccactacacagagggagcggagctgatcgagaacgtcatggatgtggtg
aggagagagagcgagaactgcgattgcctacagggtttccagatcgtgcactctctgggt
ggaggcactggctcaggcatgggcaccctgctcatgaacaagatcagggaggagtacccg
gatcggatcctcaactcctttagcgtcatgccgtcccccaaggtgtcagacacggtggta
gagccctacaacgccgtgctgtccatccaccagctgatagagaacacagatgcctgcttc
tgcatcgacaacgaagcactctatgacatttgtttccgcaccctgaggctgacaacaccc
acctatggggatctcaaccacctggtgtccttgaccatgagtgggatcacgacctcactg
cgctttcccggccagctcaatgcagacctgcgcaagctggcagtgaatatggtgcccttt
cctcgtcttcacttctttatgcctggcttcgctccactcacagcccagggtagccagcag
taccgagccttctcagtggcggagctcacccaacagatgttcgatgcccgcaatatcatg
gctgcctgtgaccctcggcgtggccgctacctgactgtggcttgtatcttccggggtaag
atgtccaccaaggaagtggaccaacagctactgtccattcagacaaggaacagcaactgc
tttgtggaatggattcccaacaatgtcaaggtagctgtgtgtgacatcccgccccggggg
ctgaacatggcggctaccttcctgggcaacaatacagccatccaagagctcttcaccagg
gtctctgagcacttctcagctatgttcagaaggagagcttttgtgcactggtacaccagt
gaagggatggacataagtgaatttggggaagcggagagtgacatccatgacctggtgtcc
gagtaccaacaattccaagatgccagagcagggctggaggacagtgaagagggtggggag
gagggggcagagatggagacagaagacaaagacccttag
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