Arvicanthis niloticus (African grass rat): 117703302
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Entry
117703302 CDS
T08817
Symbol
Rabgap1
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117703302 (Rabgap1)
Membrane trafficking [BR:
anu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117703302 (Rabgap1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Motif
Other DBs
NCBI-GeneID:
117703302
NCBI-ProteinID:
XP_034350669
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All DBs
Position
2:15503111..15626631
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AA seq
1064 aa
AA seq
DB search
MDDKASVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDDEKTGLKIVGNGSEQQL
QKELADVLMDPPMDDQPGERSQLDGEGDGPLSDQLSASSTINPVPLVGLQKPEMSLPVKP
GQGDSEVSSPFTPVADEDSVVFNKLTYLGCASVNAPRSEVEALRMMSILRSQCQISLDVT
LSVPNVSEGTVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNAELFRI
HVFRCEIQEAVSRILYSFATAFRRSAKQTPLSATTAPQTPDSDIFTFSVSLEIKEDDGKG
YFSAVPKDKDRQCFKLRQGIDKKIVICVQQTANKELAIERCFGLLLSPGKDVRNSDMHLL
DLESMGKSSDGKSYVITGSWNPKSPHFQVVNEETPKDKVLFMTTAVDLVITEVQEPVRFL
LETKVRVCSPNERLFWPFSKRSTTENFFLKLKQIKQKEKKNNADTLYEVVCLESESERER
RKTTASPSVRLPQSGSQSSMIPSPPEDDEEEDNDEPLLSGFGDVSKECAEKILETWGELL
SKWHLNLSVRPKQLSSLVRSGVPEALRGEVWQLLAGCHNNDHLVEKYRILITKESPQDSA
ITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHMPEE
QAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDISLEAHMYAS
QWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTSKDDLLLTDFEGALKFFRV
QLPKRYRSEENAKRLMELACNTKISQKKLKKFEKEYHTMREQQAQQEDPIERFERENRRL
QEANMRLEQENDDLAHELVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEDEKRRL
EEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLEKQQTANKVEIEKIRQK
VDDCDRCRDFFNKEGRVKGTSSAKGVSDEDTDEEKETLKNQLREMELELAQTKLQLVEAE
CKIQDLEHHLGLALSEVQAAKKTWFNRTLSSIKTATGVQGKETC
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggcctctgttggaaaaatcagtgtctcttcagactcagtgtctactctt
aatagtgaagattttgtcttggtttccaggcaaggagatgagacaccatctacaaataat
gggagtgatgatgagaagacaggacttaagattgtagggaatggaagtgagcagcagctt
cagaaagagctagcagatgtgctgatggatcctcccatggacgaccagccaggggaaagg
tcacaactggatggggaaggagatgggcctctttctgatcaactctcagcttcgtccacc
attaatcctgtgcctctggtagggcttcagaagccagagatgagcctaccagtgaaacct
ggacaaggagattctgaagtgtcaagtcctttcacaccagtagctgatgaggatagtgtg
gttttcaataaactaacttacttaggctgtgcctcagtaaatgctccccgaagtgaagtg
gaagccttgaggatgatgtccatcttgagaagtcagtgtcagatttctctagatgtaacc
ctctcagtgccgaatgtatctgaaggaactgtgagacttttagatcctcaaacgaacact
gaaatagcaaactaccctatctacaaaattctcttctgtgtcagagggcacgatgggact
cctgagagtgactgttttgcattcactgaaagtcactacaacgcagagctcttcaggata
catgtctttcgctgtgaaatacaagaagctgtaagccggatactttacagttttgccacc
gccttccgccgctctgccaagcagaccccactctcagccacaactgcaccacagactcct
gacagcgacatctttaccttctctgtgtctttagaaataaaagaagatgatggtaaaggt
tattttagtgctgttcccaaagacaaggacaggcaatgctttaaacttcgccagggaatt
gataagaagattgtcatctgtgtgcagcaaacagctaacaaagagcttgccattgaaagg
tgctttggtcttctccttagcccaggaaaagatgtccgaaatagtgatatgcacttgttg
gatttggagtctatgggcaaaagttcagatggaaagtcatatgttattactggaagctgg
aatccaaaatccccacattttcaagttgtgaatgaagaaactcctaaagacaaagtgcta
ttcatgacaacagctgtggatttagtgataactgaagtacaggaacctgttcgatttctt
ttagagacaaaagttcgtgtgtgttcacctaatgaaaggttattctggcccttcagcaaa
cggagcactactgaaaacttctttctgaaactgaagcagataaagcagaaggagaaaaag
aataatgctgacactttatatgaagttgtgtgtttggaaagtgagtcagagagagagagg
aggaaaactacagccagtccttcagttcgcctgccacagtctggatcccagagctccatg
atcccctctcctccagaagatgatgaagaagaagataatgatgaacctctcttgagtgga
tttggagatgtatccaaagagtgtgcagaaaaaattctggaaacatggggagaactgctg
tcaaaatggcatctcaacttgagtgtgagaccaaagcagttgtcatccttagtgagaagt
ggtgttcctgaagctcttcgtggagaagtctggcagctgctagcaggctgccacaacaac
gatcacttggtagaaaagtaccgaattctcatcacaaaggagtctccccaagacagtgct
atcaccagagatattaaccgcacatttccagctcatgactacttcaaggacacaggagga
gatggacaagattccttatataaaatatgcaaggcatactctgtgtatgatgaagagatt
ggttactgccagggccagtccttcctcgcggctgtgctgcttctccacatgcccgaagaa
caggcattcagtgttctggtcaagatcatgtttgactatggtctcagggaacttttcaaa
caaaattttgaagatctacactgcaagttctaccagttggagcgcctcatgcaggaatat
attcctgatctgtacaaccacttcctggatatcagcctggaagcacacatgtatgcctcc
cagtggttccttacacttttcactgcaaaattccctctctacatggtcttccatatcatc
gacctgctcttatgtgagggaataagtgtcatctttaatgttgcccttggattactaaag
acttcaaaggatgacttgctattgaccgactttgagggtgccttgaagttcttcagggtt
cagctccctaaaagataccgctcagaagaaaacgccaagaggctcatggagctagcctgc
aacacaaagattagccagaagaagctgaagaagtttgaaaaagagtaccataccatgagg
gagcagcaagcccaacaggaagaccccatcgagcgctttgagcgggaaaataggcgacta
caggaagctaacatgaggttggaacaggaaaacgatgacttagctcatgagctggtcacc
agcaaaattgcattgcggaaggacctggataatgcagaggaaaaggcagatgcattgaat
aaggagctgctgatgacaaaacagaagctgattgatgcagaagatgagaagaggaggtta
gaagaagagtctgcacagttaaaggaaatgtgccgtcgggaacttgacaaggcagaatca
gagattaaaaaaaacagctctatcattggtgactataagcagatttgttctcaactgagt
gaaagactggaaaagcaacagacagccaataaagtggaaattgagaaaatccggcaaaag
gtagatgactgtgatcgctgccgagacttcttcaacaaagaagggcgagtgaagggtacc
agctcagccaagggagtttcagatgaggacacagatgaagaaaaagagacgctcaagaac
cagctgcgggagatggagctagagctcgcacagaccaaactacagctggtagaagctgaa
tgcaagatccaggacttggaacaccacttgggccttgccctcagtgaggtgcaagcagcc
aagaagacttggtttaaccgaacactgagctccataaaaacagcaacgggcgttcaaggg
aaagagacatgctga
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integrated database retrieval system
