Arvicanthis niloticus (African grass rat): 117703322
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Entry
117703322 CDS
T08817
Symbol
Ddx27
Name
(RefSeq) putative ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117703322 (Ddx27)
03009 Ribosome biogenesis [BR:
anu03009
]
117703322 (Ddx27)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117703322 (Ddx27)
Spliceosome [BR:
anu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117703322 (Ddx27)
Ribosome biogenesis [BR:
anu03009
]
Eukaryotic type
Pre-60S particles
Helicases
117703322 (Ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
AAA_22
Cas3-like_C_2
PRK
Motif
Other DBs
NCBI-GeneID:
117703322
NCBI-ProteinID:
XP_034350718
LinkDB
All DBs
Position
2:136101627..136121475
Genome browser
AA seq
759 aa
AA seq
DB search
MLAELGFIGTIGENDEVPVEPESDSGDDEEEGPIVLGRKQKALQKNRSADFNPDFVFTEK
EGTYDGSWALADVMSQLKKKRAATTLDEKIEKVRKRRKAEDKEAKSGKVEEKEGQAGSDL
KGQENLDENEAGSKDEDSETDYSSEDEEILTKADTLKVKEKKKKKKKGQEAGGFFEDASE
YDKSLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFA
LPVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCNITTCLAVGGLDLKSQE
AALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCS
HHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAI
VAALLMRTFTDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQSQRLEALRRFKDEQ
IDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERK
MLKEIVKAAKAPVKARILPQDVILKFRDKIEKLEKDVYAVLQLEAEEKEMQQSEAQINTA
ERLLSKGKETADHEPERSWFQTKEERKKEKIAKALQEFDLALRGKKKRKKFMKDAKKKGE
MTAEERSQFEILKAQMFAERLAKRNRRTKRARAMPEEEPAAGPAKKQRRQQKSVFDEELT
NTSKKALKQYRAGPSFEERKQSGLPRQKRGNFKSRYKRK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgctggcggagctcggcttcatcgggaccatcggcgaaaatgacgaggtgccggttgag
cccgagtcggactctggagacgacgaggaggagggacccattgtgctgggccgcaagcag
aaagccttgcagaagaaccgaagtgctgacttcaatcctgactttgttttcactgaaaag
gagggcacatacgatggcagctgggccctggctgatgtcatgagccagctgaagaagaag
agggcagccactaccctagatgagaagatcgagaaagtacggaagagaaggaaagcagag
gataaggaagccaagtctgggaaggtggaggagaaagaaggccaggcaggctctgacctg
aaggggcaggagaatctggatgagaatgaggcaggctccaaggacgaagactctgagact
gactactcctctgaggatgaggagatcctcaccaaagcagacacactcaaagtgaaggag
aagaagaagaagaaaaagaaaggccaggaggcagggggattctttgaagatgcatctgag
tatgacaaaagcctgtccttccaggacatgaacctatcccggcccctcctgaaggccatt
acagccatgggcttcaagcagcccactccaatccagaaggcatgcatccctgtgggtctg
ctggggaaagacatctgtgcctgcgcagctactgggacaggcaaaactgcagcctttgca
ctgcctgtcttggagcgtctgatctacaagccccgccaggctgccgtcactcgagtgctg
gtgctggtccccaccagagagctaggcatccaagtgcactctgtcaccaagcagctggcc
cagttctgcaacattactacctgcctggctgtgggtggcctggatctgaagtctcaggaa
gcagctctccgggcagcacccgacatcctcatcgccacgcctggccggctcatcgaccat
ctccacaactgcccttccttccacctgagcagcattgaagtcctcatcttggacgaggct
gacaggatgctggatgagtatttcgaggagcagatgaaggagattatccgaatgtgttcc
caccaccgccagaccatgctcttctcagccaccatgacagatgaggtgaaagatctggcc
tcggtctccttaaagaatcctgtgcgcatatttgtgaacagcaacacggatgtcgctccc
ttcctgcggcaagagttcatacggatccggcctaacagggaaggggaccgggaagccatt
gtggcagctctcctgatgagaacctttactgaccacgtgatgctcttcacccagaccaag
aagcaggcccatcgcatgcacatcctcttggggctgctggggctgcaggtgggagagctt
cacggcaacttgtcacagagccagcggctggaggccctccggcgctttaaggatgagcag
attgacatcctggtggccacagatgtggcagcccgtgggcttgacatcgaaggggtgaaa
acagtgatcaacttcaccatgcccaacaccatcaaacactatgtgcaccgtgtagggcgg
actgcccgtgctggcagggctgggcgctctgtgtctctggtgggagaagaggagaggaag
atgctgaaggagatcgtgaaggctgccaaggcgccagtgaaggctcggatccttccccag
gatgttattctcaagttccgggacaagattgagaaattggagaaagatgtgtatgcagtg
ctgcagctggaggcggaggaaaaagaaatgcagcagtcagaagcccagattaacacagca
gagcgactcttatccaaagggaaagagacagcagaccacgagcctgagaggagctggttc
cagaccaaagaagagaggaagaaggagaagattgccaaggctctgcaggagtttgacttg
gccttaagaggaaagaaaaaaaggaagaagtttatgaaagatgccaagaaaaagggggag
atgacggcagaggagaggtcccagtttgaaatcctcaaggcacagatgtttgcagagcgg
ctggccaagaggaaccgcagaaccaagcgagcacgggcaatgcctgaggaagagcctgca
gcaggccctgccaagaagcagcggcggcagcagaagtctgtgtttgatgaagaactcacc
aacacaagcaagaaggccctgaaacagtatcgggcgggcccttcctttgaagagaggaaa
cagtcaggtctgccccgccagaagagagggaacttcaagtccaggtacaagagaaagtag
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