Arvicanthis niloticus (African grass rat): 117703323
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Entry
117703323 CDS
T08817
Symbol
Stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
anu01009
]
117703323 (Stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117703323 (Stau1)
Protein phosphatases and associated proteins [BR:
anu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117703323 (Stau1)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117703323 (Stau1)
mRNA cycle factors
Stress granule specific factors
117703323 (Stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
Motif
Other DBs
NCBI-GeneID:
117703323
NCBI-ProteinID:
XP_034350720
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All DBs
Position
2:complement(136042992..136085501)
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AA seq
503 aa
AA seq
DB search
MYKPVDPHSRMQSTYSYGMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKMRPPM
KHDATTRALRTLQSEPLPERLEVNGRESEEENLNKSEISQVFEIALKRNLPVNFESFPLT
QVARESGPPHMKNFVTRVSVGEFVGEGEGKSKKMSKKNAARAVLEQLRRLPPLPAVERVK
PRIKKKSQPTCKLQTAPDYGQGMNPISRLAQIQQAKKEKEPEYLLLTERGLPRRREFVMQ
VKVGNHTAEGAGTNKKVAKRNAAENMLGILGFKVPQAQPAKPALKSEEKVTAGTLCQTPV
KKPGDGRKVTFFEPSPGDENGTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGVSQGH
HTKDFTRVAPNPAKATVTAMIARELLYGGTSPTAETILKSNISSGHVPHGPRTRPSEQLY
YLSRAQGFQVEYKDFPKNNKNECVSLINCSSQPPLVSHGIGKDVESCHDMAALNILKLLS
ELDQQSTEMPRTGNGPVSACGRC
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtataagcctgtggacccccactctcggatgcagtccacctacagctatggcatgcgt
ggaggtgcctatccccccagatacttttacccgtttccagtgccaccattactctaccaa
gttgagctctccgtgggaggacagcagtttaatgggaaaggaaagatgagaccacccatg
aaacatgatgctactacccgagcactgaggactctgcagagtgagcccctgccagagagg
ctggaggtaaatggaagagaatcagaagaagaaaacctcaataaatcggaaataagccaa
gtgtttgagattgcgctgaagcggaatttgcctgtgaattttgagtctttccctctgaca
caggtggcccgggagagtggcccaccacacatgaagaactttgtgaccagggtttcagtt
ggggagtttgtaggggaaggagaagggaaaagcaagaagatgtccaagaagaacgcagca
agggctgtgctggagcagctcaggagactgccacctctccctgcagtggagcgagtgaag
cccagaatcaaaaagaaaagtcagcccacctgcaagttacagacagccccagattatggc
caagggatgaatcctattagcagactggcacagatccaacaggcgaaaaaggagaaggag
ccagagtacctgctccttacagagcggggcctcccacgccgcagggagtttgtgatgcag
gtaaaagttgggaatcacactgcagaaggagcaggtactaataagaaggtggccaagcgc
aacgctgctgagaacatgctgggaatcctggggttcaaagtcccccaggcgcagcccgcc
aagccagcactcaaatcagaagagaaggtgactgctgggactctctgccagactccagta
aagaaaccaggagatggaaggaaagtaacgttttttgaacccagccctggggacgaaaat
ggaactagtaataaggaggacgaattcaggatgccttatcttagccatcagcagctgcca
gctggaattctccccatggtgccagaggttgcccaggctgtcggggttagtcaaggacac
cacaccaaagattttaccagggtagctccaaatcctgccaaggccacggtaactgccatg
atagcccgcgagttgttgtacgggggcacctcgcccacagccgagaccattttaaagagt
aacatctcttcaggccacgtacctcatggacctcgcacaagaccctctgagcaactgtac
tacctttccagagcccagggattccaggttgaatacaaagacttccccaagaacaacaag
aacgagtgtgtatctctcatcaactgctcctcacagccgcctcttgtcagccatggcatc
ggcaaggatgtggagtcctgtcatgatatggctgcactgaacattttaaagctcctgtct
gagttggaccaacagagcacagagatgccaagaacaggaaatggaccagtttcagcgtgc
gggaggtgctga
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