Arvicanthis niloticus (African grass rat): 117703349
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Entry
117703349 CDS
T08817
Symbol
Atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04136
Autophagy - other
anu04140
Autophagy - animal
anu04211
Longevity regulating pathway
anu05010
Alzheimer disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05017
Spinocerebellar ataxia
anu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117703349 (Atg13)
04136 Autophagy - other
117703349 (Atg13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
117703349 (Atg13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
117703349 (Atg13)
05014 Amyotrophic lateral sclerosis
117703349 (Atg13)
05016 Huntington disease
117703349 (Atg13)
05017 Spinocerebellar ataxia
117703349 (Atg13)
05022 Pathways of neurodegeneration - multiple diseases
117703349 (Atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117703349 (Atg13)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117703349 (Atg13)
Membrane trafficking [BR:
anu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
117703349 (Atg13)
Atg1 complex
117703349 (Atg13)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117703349 (Atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
117703349
NCBI-ProteinID:
XP_034350771
LinkDB
All DBs
Position
2:complement(65244945..65279750)
Genome browser
AA seq
549 aa
AA seq
DB search
METDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALSGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTLTLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAEDAGVT
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTNTLRVPMAGLAFSHQLSSSR
LSYQPAVLGLGSADLAYPVVFTAGLNTTHTHQLMVPGKEGGVPLAPNHPAHGAQADQERL
VMHMPSDGTHCAATPSSSEDTETVSNSSEGRASPHDILETIFVRKVGAFVNKPINQVTLT
SLDIPFAMFAPKNLELEDADPMVNPPDSPETTSPLHGSLHSDGSSGGSSGNTHDDFVMID
FKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDFGAQSMAEDLDSLPEKLAVHEKNVRE
FDAFVETLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcagttcccaggacagaaaggacctcgacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggagaaaagatttgcacccgt
tcatcatcttcccctacaggttccgattggttcaatttagcaatcaaagacatcccagaa
gtcacccatgaagcaaagaaggccctgtcggggcagctgcctgctgtggggcggtctatg
tgtgtggagatctcactcaagacttctgagggagattccatggagttggaaatttggtgt
cttgaaatgaacgaaaagtgtgacaaagaaatcaaagtttcctacactgtatacaaccga
ttgtcactgctgctgaagtctcttcttgctattacaagggtgacaccagcctatagactc
tccaggaagcaggggcatgaatatgtaattttgtacaggatttattttggggaagttcaa
ctgaatggcttaggagaaggcttccagacagttcgagttggaacagtgggaacccctgtg
gggaccctcactctttcttgtgcttatagaatcaacttggcattcatgtccaccaggcaa
tttgagagaaccccacctatcatggggattatcattgatcactttgttgaccgtccctat
cccagctcctctcctatgcacccttgcaattacagaactgctgaggatgctggagtcaca
tacccatcagtggaagactctcaggaagtgtgtaccacatctttttccacatcccctccc
tcacagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtgacg
aacactctgagggtccccatggcaggactggccttttcccatcaactctcaagctctcgc
ctttcctatcagcctgctgtcctgggccttggatcagctgacctggcttatccagtagtg
tttactgctggcttaaacactacacacactcaccagctgatggttcctgggaaagaaggt
ggggtacctcttgctcccaaccaccctgctcatggtgcccaggctgatcaggagagactt
gtgatgcacatgccttctgatgggacccactgtgccgccacaccctcaagcagtgaggac
actgagactgtatctaacagcagtgaaggacgggcctcaccccatgacatcttggagaca
atctttgtccgaaaagtgggagcatttgtcaacaaacccatcaatcaggtgaccttgacg
agtttggacataccctttgccatgtttgctcctaagaatttggagctggaggatgctgat
cctatggtgaatcccccggactccccagagaccacatctcccctccatggcagcctgcac
tcagatggctccagcgggggcagcagtggcaacacacatgacgactttgttatgattgac
tttaaaccagctttttctaaagacgacattcttccaatggacttggggaccttttaccgt
gaatttcagaatccccctcagctgagcagcctctccatagactttggagctcagtctatg
gcggaagacttggactccttaccagagaagctggctgtgcatgagaagaatgtccgagaa
tttgatgcttttgtcgaaaccctacagtaa
DBGET
integrated database retrieval system
