Arvicanthis niloticus (African grass rat): 117703374
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Entry
117703374 CDS
T08817
Symbol
Nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
anu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117703374 (Nup160)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117703374 (Nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117703374 (Nup160)
03036 Chromosome and associated proteins [BR:
anu03036
]
117703374 (Nup160)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117703374 (Nup160)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117703374 (Nup160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Nup160_C
TPR_NUP160_120_M
Beta-prop_Nup120_160
NUP160_helical
HEAT_Nup120
TPR_2
Motif
Other DBs
NCBI-GeneID:
117703374
NCBI-ProteinID:
XP_034350827
LinkDB
All DBs
Position
2:64281985..64335732
Genome browser
AA seq
1402 aa
AA seq
DB search
MAAAGSLERSFVELSGAERERPRHFREFTVCDIGAANAAFGTVKYSESAGGFYYVESGKL
FSITRNRFIHWKTSGDTLELVEESLDLNLLNNAVRLKFQNSNILPGGVHVSETQNHVIIL
ILTNQTVHRLILPHPSRMYRSELVTESQMQSIFTDIGKVDFRDPCNYQLIPAVPGLSPSS
TTSAAWLSSDGEALFALPSASGGIFVLKLPPYDIPGIASVVELKQSSVMQRLLTGWMPTA
IRGDHGPSDRALSLAVHCVEHDAFIFALCQDHKLRMWSYKDQMCLMVADMLEYVPVNKDL
RLTAGTGHKLRLAYSPSMGLYLGIYMHAPKRGQFCIFQLVSTENNRYSLDHISSLFTSQE
TLVDFALTSTDIWALWHDAENQTIVKYINFEHNVAGQWNPVFMQSLPEEEIVIRDDQDPR
EMYLRSLFTPGQFINAALCKALQIFCRGTERNLDLSWNELKKEITLAVENELQGSVTEYE
FSQDEFRTLQQEFWCKFYACCLQYQEALSHPLALHLNPLTNMVCLLKKGYLSFLVPSSLV
DHLYLLPDEHLLTEDETTISDDADVARDVLCLIKCLRMIGESVTMDMAVLMETSCYNLQS
PEKAAEHILEDLITIDVENVMEDICSKLQEIRNPVHAIGLLIREMDYETEVEMEKGFDPA
QPLNVRMNLSQLYGSSTAGYIVCRGVYKIASTRFLICRDLLILQQLLTRLGDAVILGAGQ
LFQAQQDLLHRTAPLLLSYYLIKWASQCLATDVPVDTLESNLQHLSVLELTDSGALMANK
LVSSPQTIMELFFQEVARKHIISHLFSQPKAPLSQTGLNWPEMITAVTGYLLQLLWPSNP
GCLFLECLMGNCQYVQLQDYIQLLHPWCQVNVGSCRFMLGRCYLVTGEVQKALECFCQAA
SEVGKEEFLDRLIRSEDGEIVSTPKLQYYDKVLRLLDVVGLPELVIQLATSAITEAGDDW
KSQATLRTCIFKHHLDLGHNSQAYEALTQIPDSSRQLDCLRQLVVVLCERSQLQDLVEFP
YVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRT
LRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVFDRPGASPKRNHDGECTAAPTNRQ
IEILELEDLEKECSLARIRLTLARHDPSAIAIAGSSSAKEMCTLLVQAGLFDTAISLCQT
FKLPLTPVFEGLAFKCIKLQFGGEAAQGEAWAWLAANQLSSVITTKESSATDEAWRLLST
YLERYKVQNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVDLV
SEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALGENSANSHNMILSQKILD
KLEDYQQKVDKATRDLLYRRDL
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggatccctggaacggagcttcgtggaactgagcggagctgaacgcgaa
aggcccaggcactttcgggaatttacagtctgcgacattggagctgcaaatgccgcgttt
ggaacggtgaaatacagtgagagcgcaggaggcttctattatgtggaaagtggcaagttg
ttctccatcaccagaaacaggttcattcattggaagacttctggggatacattggagctg
gtggaggaatcattggacttaaatttgttgaataatgctgttcgcctaaaattccaaaat
tccaacatcttacccggtggtgttcatgtctctgagactcagaatcatgtgataatcttg
atattaaccaatcagacagtacacagattaattttaccacacccttcccgtatgtacaga
agtgagctggtaactgaaagtcagatgcagtccatatttactgacattggaaaagttgat
ttcagagatccttgcaactatcagttaattccagcagtacctggactgtccccaagttcc
accacgtctgcagcctggcttagcagtgatggggaggctctgtttgctctaccatctgct
tctggtggtatctttgttcttaagctccctccttatgacatacctgggatagcatcagtt
gtggaactgaaacagagttcagtgatgcagcggttgctcacaggctggatgcccacagct
ataaggggtgaccatgggccttcagatcgtgccctgagtcttgctgttcattgtgttgaa
catgatgcctttatttttgccctgtgtcaggatcataaactacggatgtggtcttataag
gaccaaatgtgcctgatggtggctgacatgctagaatatgtccctgtaaacaaagacctt
cggcttactgcaggaacagggcataaattacggcttgcctactccccttccatggggctc
tacctaggaatatatatgcatgctccaaaacgaggacagttctgcattttccagttggtg
agcactgagaataatcgctatagtttagatcacatttcttcactgttcacttctcaggag
acattggtcgattttgccttaacctcaacggatatctgggccctgtggcatgatgctgag
aaccaaacaattgtgaaatatatcaacttcgaacataatgttgcaggtcagtggaatcca
gtttttatgcagtctctaccagaagaagaaattgtcatcagagacgaccaagaccccaga
gaaatgtatttgcggagcctttttacaccaggacaatttataaatgcagctttatgcaaa
gctttacagattttctgccggggtactgagaggaacttggatctttcatggaacgaacta
aagaaggaaattactttagctgttgaaaatgagctccaaggaagtgtaacagagtatgaa
ttctctcaggatgagtttcgtactttacaacaggaattctggtgcaagttctatgcctgc
tgtctccagtatcaggaagccctctcccaccctcttgctctacatttgaatcctctcaca
aacatggtgtgccttctgaagaaagggtacctgtctttcctggtaccatcttccttagta
gatcacttatatctcctgcctgatgagcaccttttgacagaggatgagacgaccatatca
gatgatgcagatgtggcacgggatgtcttatgtcttataaaatgcctccggatgattgga
gagtcagttaccatggatatggcagttttgatggaaaccagttgttacaacttgcagtct
ccagaaaaggctgcagaacacattttggaagatttgatcactattgatgtagaaaatgtg
atggaagacatttgtagtaaactgcaagagatcagaaaccccgtccatgccattggactt
cttatacgggaaatggattatgaaacagaagtggaaatggaaaaggggttcgatccagct
cagcctttgaacgttcgaatgaatctttcccagctctatggtagtagcacagcaggatat
attgtgtgcagaggtgtgtataaaattgccagcactcgattcctgatctgccgagacctc
ttgatcttacagcagctattaacaaggctaggagatgcagtgatcctaggagctggtcaa
ctctttcaagctcagcaagacctgctacaccgcacagctcccctgctcttgtcttattac
ctcatcaagtgggcaagtcagtgcttggcaacagatgtcccagttgacacactggagtct
aatctacaacatttgtcagtactggagctaactgattctggggccttaatggcaaataaa
ttggtatctagccctcagacaattatggagttattcttccaagaagttgcaagaaaacat
attatatctcatctcttctctcaacccaaagcccctctaagccaaactggattgaattgg
cctgaaatgattactgcagttaccggttatttgttgcagcttttatggcctagcaatcct
ggttgtctctttctagaatgtttgatgggaaattgccagtatgtacaattgcaggattat
atccaactactgcatccctggtgccaagtcaatgttgggtcctgccgatttatgctggga
cggtgttacctagtaacaggagaagtacagaaggctctggaatgtttctgtcaggcagca
tctgaagtgggcaaagaagaattcttagatcgcttgatccgatcagaggacggggagatt
gtgtccacccccaagttgcagtattatgataaggttttacgtctactagatgttgttgga
ttgcctgagctggttattcagcttgctacgtcagcaattactgaagcgggtgatgactgg
aaaagtcaggctactttaagaacatgcattttcaaacatcatttggacttgggtcataat
agccaagcatatgaggccttaactcaaattcctgactctagcaggcagttagactgttta
cgacagctcgtggtcgttctttgtgaacgctcccaactgcaggaccttgtagaatttccc
tatgtgaatctgcataatgaggttgtagggataattgaatcgcgcgccagagctgtggac
ctcatgactcacaattactacgaactcctctatgcttttcacatttaccgccacaattac
cggaaagctggtacagtgatgtttgaatatggtatgcgtcttggcagagaggttcgaact
ctcaggggacttgagaagcaaggcaactgttacctggccgctattaattgtttacggctt
attcgtccagagtatgcatggatcgtacagccagcctctggggcagtgtttgatcgccct
ggagcatctcctaagaggaatcatgatggcgagtgcacagctgccccaaccaatcggcaa
attgaaattctggaattggaagatctggagaaagagtgttctttagctcgtattcgcctc
acgttggctcggcatgatccatcagcgattgccattgcaggaagttcatcagcaaaggag
atgtgcactctcttggttcaggctggcctctttgacactgccatatcactctgtcagact
tttaagcttccattaacaccagtctttgaagggcttgctttcaagtgcattaagttgcag
tttggaggagaagcagcacaaggagaagcctgggcctggctagcagccaatcagctatct
tctgtcatcactaccaaggagtccagtgctacagatgaagcttggaggctattgtcaact
tacttggaaagatacaaagtccagaataacttgtatcatcactgtgtgattaacaagttg
ttgtctcatggagttcctctgcctaattggcttataaacagttacaagaaagttgatgct
gctgagttgcttcgtctttacctgaactatgaccttttagaagaagctgtggatctggtc
tctgaatacgtagatgctgtattaggaaaaggacatcagtactttggaattgagtttcca
ctgtcagcaacagccccgatggtatggctcccgtactcttccattgaccagcttctccag
gctctgggagagaacagtgccaacagtcacaacatgatactgtcccagaaaattcttgac
aaactagaagactaccagcaaaaagttgacaaggcaacccgagatttactataccgtagg
gacttgtga
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