Arvicanthis niloticus (African grass rat): 117703455
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Entry
117703455 CDS
T08817
Symbol
Nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117703455 (Nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117703455 (Nelfcd)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
117703455 (Nelfcd)
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Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
117703455
NCBI-ProteinID:
XP_034350951
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Position
2:143385173..143396723
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AA seq
591 aa
AA seq
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MAGPAPGTIMGEDYFGNASEWGEEADGGQHQEDDSGEGEDDAEVQQECLHKFSTRDYIME
PSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHL
KSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLI
SDAGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYL
FAQAMMSVLAQEEQGGSAVRRVAQEVQRFAQEKGHDASQITLALGTAASYPRACQALGAM
LSRGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHI
LAYAASVVETWKKNKRVSIGKDELKSTSKAVETVHNLCCNENKGASELVAELSTLYQCIR
FPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFET
EHSQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVLD
VIGPPYTSDFVQLFLPILENDSIAGTIKAEGEHDPVTEFIAHCKSNFIVVN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtccagcgccgggtacaattatgggagaagactacttcgggaatgcatccgag
tggggcgaagaggcggacggcggccagcatcaagaagatgattccggagaaggagaggac
gacgctgaggtgcagcaggagtgtctgcataagttttccacccgggactacatcatggag
ccctccatcttcaatactttgaagaggtattttcaggcaggagggtctccagaaaatgtt
atccagctcttatctgagaactatacggcagtggcccagactgtgaacctgctggctgag
tggctcattcagacaggtgttgagccagtgcaggtacaggagactgtggaaaaccatttg
aagagtttgctgatcaagcactttgaccctcggaaagcagattctattttcactgaagaa
ggagagaccccagcatggcttgagcagatgatcgcacacaccacatggagagatctgttt
tataagctggctgaggcccatcctgactgtctgatgctcaacttcaccgtgaagctcatt
tctgacgcggggtatcaaggggagatcaccagcgtgtccacagcctgccagcagctggaa
gtgttctccagagtgctccggacctctctcgcaactatcttggatggaggagaagagaac
cttgagaaaaatctccctgagtttgcaaagatggtgtgtcatggggagcacacgtacctg
ttcgcacaggccatgatgtccgtgctggcccaggaggaacagggtggttctgcagtacgc
agggtcgctcaagaagtccagcgcttcgcccaggagaaaggccatgatgccagtcagatc
acgctggccttgggtacagctgcctcctacccccgtgcctgccaagcccttggcgccatg
ctgtccaggggggccctgaatcctgcggacatcacagtcttgttcaagatgttcaccagc
atggaccctcctcctgtggaactcatccgggtgccagccttcctggacctgttcatgcag
tcgctcttcaagccaggggccaagattaaccaggatcacaagcacaagtacatccacatc
ctggcttacgctgccagtgtggttgagacctggaagaagaacaagcgggttagcattggc
aaagacgagctcaagtccacgtcaaaggctgtagaaactgtccacaatctgtgctgcaat
gagaacaaaggggcctctgagctggtggctgagctgagcacactttatcagtgcattagg
tttccagtggtggcgatgggcgtgctgaagtgggtggactggaccgtgtcggagcccagg
tacttccagctacagactgaccacactccggtgcacctggccttgctggacgagatcagt
acctgccaccagctcctgcacccccaggtcctgcagcttcttgttaaactctttgagacc
gagcactcccagctagacgtgatggagcagcttgagttgaaaaagaccctgctggacagg
atggtacacctgctgagccgtggctatgtccttcctgtggtcagttatatccgcaaatgc
ctggagaagctggacaccgacatctcactcatccgctactttgtcactgaggttctggat
gtcattggccctccatacacatcagactttgtacaacttttcctccccatcttggaaaat
gacagcattgcgggcaccatcaaagcagagggcgagcacgaccccgtgacggagttcatt
gctcactgcaagtctaacttcatcgtggtgaactga
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