Arvicanthis niloticus (African grass rat): 117703457
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Entry
117703457 CDS
T08817
Symbol
Chrna1
Name
(RefSeq) acetylcholine receptor subunit alpha isoform X1
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
anu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117703457 (Chrna1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117703457 (Chrna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117703457 (Chrna1)
Ion channels [BR:
anu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117703457 (Chrna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF4980
Claudin_2
Motif
Other DBs
NCBI-GeneID:
117703457
NCBI-ProteinID:
XP_034350954
EnsemblRapid:
ENSANLG00005005867
LinkDB
All DBs
Position
2:complement(49105767..49120488)
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AA seq
457 aa
AA seq
DB search
MDLSTVLLLLGLCSAGLVLGSEHETRLVANLFKDYSSVVRPVEDHREIVQVTVGLQLIQL
INVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDIVLYNNADGDF
AIVKFTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTWTYDGTVVAINP
ENDQPDLSNFMESGEWVIKEARGWKHTVCYSCCPNTPYLDITYHFVMQRLPLYFIVNVII
PCLLFSFLTSLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLF
TMVFVIASIIITVVVINTHHRSPSTHTMPEWVRKVFIDTIPNIMFFSTMKRPSRDKQERR
IFTEDIDISDISGKSGPPPMGFHSPLIKHPEVKSAIEGVKYIAETMKSDQESNNAAEEWK
YVAMVMDHILLGVFMLVCLIGTLAVFAGRLIELHQQE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggatctctccactgtcctcctgctgcttggcctctgctccgctggccttgttctgggc
tccgaacatgagactcgtctggtggcaaacctctttaaagactatagcagcgtggtccgg
ccagtggaggaccaccgtgagattgtgcaggtcactgtggggctgcagctgatccagctt
atcaatgtggatgaagtaaatcagattgtgaccaccaatgttcgtctgaaacagcaatgg
gtcgattacaacttgaaatggaatccagatgactatggaggagtgaaaaaaattcacatt
ccctcggaaaagatctggcggccggacattgttctctataacaatgcagacggcgacttt
gccattgtcaaattcaccaaggtgctcctggactacactggccacatcacctggacacct
ccagccatctttaaaagctactgtgagatcattgtcacccactttccctttgatgagcag
aactgcagcatgaagctgggcacctggacctatgacggcactgtggtggccatcaacccg
gaaaatgaccagcccgacctgagtaacttcatggagagcggggagtgggtgatcaaggaa
gcccggggctggaagcacacggtgtgttactcctgctgccccaacactccctacctggac
atcacctaccacttcgtcatgcagcgcctgcccctctacttcattgtcaatgtcatcatt
ccctgcctgctcttctccttcttaaccagcctggtattctacctgcccacagactcgggg
gaaaagatgacactgagcatctcggtcttactgtccctgaccgtgttccttctggtcatc
gtggagctgatcccttccacatccagtgctgtacccctgatcgggaaatacatgttgttc
accatggtctttgtcattgcgtccatcatcatcaccgtcgtcgtcatcaacacacaccac
cgttcgcccagcacccacaccatgcccgagtgggtgcggaaggtttttatcgacactatt
ccaaacatcatgtttttctccacaatgaaaagaccatctagagataaacaagagcgaagg
atttttacagaagacatagatatctctgacatctctgggaagtcggggcctccacctatg
ggctttcactctccgctgatcaagcaccctgaggtgaaaagcgccatcgagggcgtgaag
tacattgcagagaccatgaagtcagaccaggagtccaataatgcggctgaggaatggaag
tatgttgcaatggtgatggaccacatcctccttggagtctttatgctggtgtgtctcatc
gggacgctggctgtgtttgcaggtcggctcattgagctacaccaacaggaatga
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