Arvicanthis niloticus (African grass rat): 117703496
Help
Entry
117703496 CDS
T08817
Symbol
Rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117703496 (Rbm39)
Spliceosome [BR:
anu03041
]
Common components
Common spliceosomal components
General mRNP proteins
117703496 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
117703496
NCBI-ProteinID:
XP_034351032
LinkDB
All DBs
Position
2:complement(125563477..125594698)
Genome browser
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggccccttacaagaaggatgagaac
aagttgaacagtgctaacggccatgaagaacgtagcaaaaagagaaaaaaaagcaagagc
agaagtcgtagtcatgagagaaaaagaagcaaaagtaaagaacggaaacgaagtcgagat
agagaaaggaaaaagagcaaaagccgagagcggaaacgaagtagaagcaaagaacggaga
cgaagccgctcacgaagtcgagatagaagattccgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacgttcccgaagcaaaagtccattcaggaaagacaagagccctgtgagggaa
cctattgataatctcactcctgaggaaagagatgcaaggacagttttctgcatgcaactg
gcagcaagaattcgaccaagagatttggaagaatttttctctacagtaggaaaggttcga
gatgtaagaatgatttctgatagaaattcaagacgttccaaaggaattgcctatgtggaa
tttgttgatgtcagttcagtgcctctagcaattggattaactggccaacgagttttagga
gtgccaatcatagtacaggcatcacaggcagaaaaaaacagagctgctgcaatggcaaac
aatttacaaaagggaagtgctggacctatgaggctctacgtgggctcgttgcactttaac
ataactgaagatatgcttcgggggatctttgaaccttttggaaggattgaaagtattcag
ctcatgatggatagtgaaactggtcgatctaagggatatggattcattacattttctgat
tcagaatgtgccaaaaaggctttggaacagcttaatggatttgagttagctgggagacca
atgaaagttggacatgttactgaacgaactgatgcttctagtgctagctcatttttggac
agtgatgaactagaaaggactggaattgacttgggaacaactggacgtctccagttaatg
gcaagacttgcagagggtaccggtttgcagattccaccagcagcacagcaagctttacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcccaacagactgaagcctcagctttagctgcagctgcatctgttcaacct
ctagccacacagtgtttccaactttccaacatgtttaatcctcaaacagaagaagaagtt
ggatgggatacagagattaaagatgatgtcattgaagaatgtaataaacatggaggagtc
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatct
attgctgcagctattgctgctgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcgtatgtacctcttccaacttaccacaacctctttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga
DBGET
integrated database retrieval system
