Arvicanthis niloticus (African grass rat): 117703504
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Entry
117703504 CDS
T08817
Symbol
Sema6d
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
117703504 (Sema6d)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
117703504
NCBI-ProteinID:
XP_034351078
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Position
2:95767007..95780175
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AA seq
1086 aa
AA seq
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MRFFLLWFCVLFLLVSRLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPQTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGIPTVIGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDDTLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR
LTAIEVDRSAGPYQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNPAKCSAE
TEEDRKVISLQLDKDHHALYVAFSSCVVRIPLSRCERYGSCKKSCIASRDPYCGWLSQGV
CERVTLGMLLLTEDFFAFHNHSAGGYEQDTEYGDTAHLGDCHESLPTSTTPDYKIFGGPT
SDMEVSSSSVTTVASSPEITSKVIDTWRPKLTSSRKFVVQDDPNTSDFTDTISGIPKGVR
WEVQSGDSNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSC
TDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNTDTKSMAMDHRGQPPE
LAALPTPESTPVLHQKPLQAMKSHSEKAHSHGASRKEHPQFFPSSPPPHSPLSHGHIPSA
IVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKREHRRSVDSRNTLNDLLKHLN
DPNSNPKAIMGEIHMAHQTLMLDPVGPMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDV
PTTPGVPMTSLERQRGYHKNSSQRHSISAVPKNLNSPNGVLLSRQPSMNRGGYMPTQTGA
KVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTTSVRP
LNKYTY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaggttctttctgctttggttctgcgtgctgttccttctggtctccaggctacgggca
gtcagcttcccagaagatgacgagccccttaacactgttgactatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaacgaatcgcagcataggctggactttcag
ctgatgttgaaaattcgagacacactttacattgctggcagggatcaagtctatacggtg
aacttaaatgaaatcccccaaacagaggtgataccgagcaagaagctgacatggaggtcc
agacagcaggatcgagaaaattgtgctatgaaaggcaagcataaagatgaatgccacaac
ttcatcaaagtctttgtcccaagaaatgatgagatggtttttgtctgtggtaccaatgct
ttcaacccaatgtgcagatactacaggttgagtaccttagagtatgatggggaagaaatt
agtggtctggcacgatgcccatttgatgcccgacaaaccaatgttgccctctttgctgat
gggaaactctattctgccacagtggctgatttcctggccagtgatgctgtcatttacaga
agcatgggcgatggatctgcccttcgcacaataaaatacgattccaaatggatcaaagaa
ccacactttcttcatgccatagagtatggaaactatgtctatttcttcttcagagaaatc
gccgtggaacataataacttaggcaaggctgtgtattcccgcgtggctcgcatttgtaaa
aacgacatgggtggctcacagcgggtcctggagaagcactggacttccttcctaaaggct
cggcttaactgctcggttcctggagattcctttttctacttcgatgttctgcagtctata
actgacataatccaaatcaatggcatccccactgtgattggggtcttcaccactcagctc
aacagcattcctggttctgccgtctgtgccttcagcatggatgacattgagaaagtgttc
aaagggcggttcaaagaacagaaaaccccagactctgtatggacagcggttcctgaagac
aaagtaccaaaaccaaggcctggctgttgtgccaaacacggcctcgcggaagcttacaaa
acctccatcgacttcccagatgacaccctgtctttcatcaagtcccacccactgatggac
tctgctgtcccacccattgcagacgagccctggttcacaaagactcgggtcaggtacagg
ttgacagccatcgaagtggaccgttcagcagggccataccaaaactacacagtcatcttc
gttggctccgaagctggcgtggtgcttaaagttttggcaaagactagtcctttctctttg
aatgacagtgtattactcgaagagattgaagcttacaacccagccaagtgcagtgccgag
actgaggaggacagaaaggtcatctcattacagctggacaaggatcaccatgctttatat
gtggccttctctagctgcgtggtccgcatccccctcagccgctgcgagcgctacggatcc
tgtaaaaagtcttgtatcgcatcacgtgacccatactgtggttggttaagccagggagtt
tgtgagagagtgaccctggggatgctgctgttaactgaagacttctttgctttccataac
cacagtgctggaggatatgagcaggacacggagtatggcgacacagcccacctaggggac
tgccacgaaagtttgcctacttcaactacaccagattacaaaatatttggcgggccaaca
tctgacatggaggtatcctcatcttctgttaccactgtggcaagtagcccagaaattaca
tctaaagtgattgatacctggagacctaaactgacgagctcccggaaatttgtagttcaa
gatgacccaaacacttctgattttactgatactatatcaggtatcccaaagggtgtacgg
tgggaagtccagtctggagattccaaccagatggtccatatgaatgtcctcatcacctgt
gtgtttgcagcttttgtcttgggtgcattcattgcaggagtggctgtatactgctatcgt
gacatgttcgttcgcaagaacagaaagatccataaagacgcagagtcagcccagtcatgt
acagactccagtggaagctttgccaagctgaacggcctctttgacagtcctgtcaaggaa
taccagcagaacattgattctcctaagctctacagcaacctgctgaccagtcggaaggag
ctgccacccaacacggatacaaaatccatggccatggaccatcgaggccagcctccagag
ctggctgctctccccacaccagaatccacacctgtactccaccagaagcccctgcaggcc
atgaagagccactctgagaaggcccacagccatggtgcttcaaggaaagaacacccccag
ttttttccttccagtcctccaccccattccccattaagtcacgggcacatccccagtgcc
attgttcttccaaacgccactcacgactacaatacatccttctcaaactctaatgcccac
aaagccgaaaagaagcttcagaacatcgatcaccctcttacaaagtcatccagtaagagg
gaacaccggcgttctgtggattccagaaataccctcaatgatctcttgaagcatctaaat
gacccaaacagtaaccccaaggccatcatgggagaaatccatatggcccatcaaaccctc
atgctggacccagtgggaccaatgtctgaggtcccacccaaggtccctaacagggaggca
tctctatactctcctccctcaacacttcccagaaatagtccaaccaagagagtagatgtc
cctaccactcctggggtcccaatgacttctctggaaagacaaaggggttatcacaaaaat
tcctcccagaggcactctatatctgctgtgcctaaaaacttaaactcaccaaatggtgtt
ttgttatctagacagccgagtatgaaccgtggaggatatatgcccacccaaacaggggcg
aaggtggactatattcaggggacaccagtgagtgttcatctgcagccctccctctccaga
caaagcagctacaccagtaatggcaccctacccaggacgggacttaagaggacaccatcc
ttaaaacctgatgtgccaccaaagccttcctttgttcctcaaaccacatctgtcagacca
ctgaacaaatacacttactaa
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