KEGG   Arvicanthis niloticus (African grass rat): 117703709
Entry
117703709         CDS       T08817                                 
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu03015  mRNA surveillance pathway
anu05164  Influenza A
Brite
KEGG Orthology (KO) [BR:anu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    117703709
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    117703709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:anu03021]
    117703709
   03019 Messenger RNA biogenesis [BR:anu03019]
    117703709
Transcription machinery [BR:anu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     117703709
Messenger RNA biogenesis [BR:anu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     117703709
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_3 zf-CCCH_2 Torus zf-CCCH_4 Nab2-like_zf-CCCH_
Other DBs
NCBI-GeneID: 117703709
NCBI-ProteinID: XP_034351398
LinkDB
Position
2:60641367..60641932
AA seq 167 aa
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKLGAAVCEFYLKAACGKGDMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCGFLHEYDMTKMPECYFYSKFRECSNKECPFLHIDPESK
IKDCPWYDRGFCKQGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHP
NT seq 504 nt   +upstreamnt  +downstreamnt
atgcaggaaatcattgccagcgtggatcacatcaagttcgacttggagattgctgtggag
cagcagctcggggcgcagccgctgcccttcccaggcatggataagttgggggctgctgtc
tgtgaattttatttgaaagctgcctgtggcaaaggggatatgtgtccattccgccacatt
agtggtgagaagacagttgtgtgcaaacactggctgagaggactgtgcaagaaaggggac
cagtgtgggttcctgcatgaatatgacatgaccaagatgcctgagtgctacttttactcc
aagttcagggaatgcagcaacaaggagtgccccttcctgcatatcgaccctgaatccaag
atcaaggactgcccttggtatgaccgtggcttctgtaagcaaggtcccctgtgtaggcat
cgacacacccggagagtcatttgtgtgaactacctggttggattctgccctgagggaccg
tcatgtaaattcatgcacccttga

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