Arvicanthis niloticus (African grass rat): 117703836
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Entry
117703836 CDS
T08817
Symbol
Ss18l1
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03082
ATP-dependent chromatin remodeling
anu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117703836 (Ss18l1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
117703836 (Ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117703836 (Ss18l1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117703836 (Ss18l1)
GBAF(ncBAF) complex
117703836 (Ss18l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
117703836
NCBI-ProteinID:
XP_034351573
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All DBs
Position
2:146209840..146233165
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AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGALSQTGSSQGLHPQGSLSDTVSTGLPPASLMQ
GQIGNGPNHVSMQQTAQSTLPTTSMSMSGSGHGTGPGYSHSGPTSQSVPMQGQGAISNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQRPMAP
YRPSQQGSSQQYLGQEEYYSEQYSHGQGSAEAMSQQYYPDGHGDYAYQQSSYTEQSYDRS
FEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQGAPSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggccttcgcttcggcgcggccgagaggcaaaggggaggtcactcagcagacc
atccagaagatgctggatgaaaaccaccacctgatccagtgcatcctggactaccagagc
aagggcaagacagctgagtgcacccagtaccagcagatcctgcaccggaacctggtctac
ctggccaccatagcagactccaaccagaacatgcagtctctgcttcccgcgcctccaaca
cagaacatgaaccttggccccggagcactgagtcagactggttccagtcagggcctgcac
ccccagggcagcctcagtgataccgtcagcacaggcctgccccctgcctccctcatgcag
ggccagatcggtaacgggccaaaccacgtgtccatgcagcagacggcccagagcacactg
cccacaacctccatgagtatgtcaggcagtggtcatggtactgggcctgggtacagccac
tcgggacctacctcacagagtgtccccatgcaagggcaaggtgccatcagcaactatgtg
tctcggaccaacatcaacatgcagtccaacccagtctccatgatgcaccagcaggcagcc
acatcccactacaactcagcacagggtggaagccagcattaccagggccaggcacccatt
gccatgatgggccaaggtggccaaggaggcagcatgatggggcagcggcccatggcgccc
taccgaccctcccagcaaggctcttcccagcagtacctgggccaggaggagtactacagc
gaacagtacagccacggccagggctcggcagaagccatgagtcagcagtactacccagac
ggccacggagactacgcctatcagcagtcgtcctacacagagcagagctacgaccgctca
tttgaggatcccacacagcactactatgaggggggaaactcccagtacagtcagcagcag
gctgggtaccagcagggcacagcacagcagcagacctactcccagcaacaatatcccaac
caacagagctacccagggcaacagcagggctacggccctgcccagggagccccctcccag
tactcaagctaccagcaaggacaaggtcaacagtatggaagttacagagcgtcgcagaca
ggaccttctgcccagcagcagcggccttatggctatgagcagggccagtatgggaattac
cagcaataa
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integrated database retrieval system
