Arvicanthis niloticus (African grass rat): 117703988
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Entry
117703988 CDS
T08817
Symbol
Adamts13
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04611
Platelet activation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
117703988 (Adamts13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117703988 (Adamts13)
Enzymes [BR:
anu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
117703988 (Adamts13)
Peptidases and inhibitors [BR:
anu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
117703988 (Adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADAMTS_CR_3
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_3
Reprolysin_5
Adt-1
Reprolysin_4
TSP1_spondin
Peptidase_M10
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
117703988
NCBI-ProteinID:
XP_034351812
LinkDB
All DBs
Position
2:1255883..1284887
Genome browser
AA seq
1425 aa
AA seq
DB search
MSQLCLWLMCQPFHAASIRGILTGAIFILGCWGLSDFQKSFLQDLKPKGISSYFGRHAAP
LTGHPSSHLQRLRRRRTLEDILHLELLVAVGPDVYQAHQEDTERYVLTNLNIGSELLRNP
SLGAQFQVHLVKLIILSNLESTPNITTNITSSLMSVCEWSQTINPHDDRDPSHADLILYI
TRFDLELPDGNQQVRGVTQLGGACSPSWSCLITEDTGFDLGVTIAHEIGHSFGLDHDGAP
GRGSTCEASGHVMASDGAVPTGGALVWSTCSQRQLQHLLSAGQMHCFWDPPGLQSGLTGH
QLVAQPGLYYSVDDQCRVAFGSGAIACTFSREGLDACQALSCHTDPLDQSSCSRLLVPLL
DGTECGVEKWCSKARCRSLAELAPVAAVHGHWSSWGPPSPCSRSCGGGVITRRRWCNNPR
PAFGGRACVGEDLQATMCNTQACEKTQLEFMSEQCAQTDRQPLELSQGTASFYHWDAAMQ
YSQGDALCRHMCWAVGESFIVSRGDSFLDGTRCVPSGPQEDGTLSLCLSGSCRTFGCDGR
MDSQQVWDMCQVCGGDNSTCSSQNGSFTAGRAREYVTFLIVTPNMTSVHIVNRRPLFTHL
AVRIQGHYIVAGKTSISSNITNPSLLEDYRLEYRVTLTEDQLPHLEEIHIRGPVREDIEI
QVYRRYGGEYGNLTHPDITFTYFQLKQQAAWVWTPKHGPCSVSCGAGLRWVTYSCQDQAQ
NKWVENAQCQGSPQPSAWQEPCVSAPCSPYWVSGDFSPCSVSCGGGLRERSLHCVEAQDG
FLKMLPPARCRAVAQQPATEVENCNSQPCPTRWEVSDPGPCKSSACEAGLDSRNVTCVPR
VGDREKPATAGPCRTDEMSPMLEPCFRTTCSPDSGQVGTMSLGEEAPSPVGSDKPGSQAE
HVWTPLVGLCSISCGRGLKELYFLCMDSVLKMPVQEELCGVASKPPSRWEVCRVRPCPAR
WETQVLAPCPVTCGGGQVPLAVRCVRLDHGRPVSVAHSKCWPVPRPHSFEDCSPEPCPAR
WKVLSLGPCSASCGLGTATQMVACMQLDQGHDNEVNETFCKALVRPLASVPCLVADCAYR
WHIGTWTECSVSCGEGIQRRHDTCLGPQAQVPVPANFCQHLPKPVTVRGCWAGPCAGQEI
SRSLTHTEATLPSQTQAAVTVASLQWTQPQAQARTLFPASQSLGLQENLEEPGACGRQYL
EPTGIIDMRSKGQLDCVVAIGRPLGEVLTLQILESSLKCSAGELLLLWGRFTWRKICWKM
LGMTFSTKTNTLVVRQHRVVPGGGVLLQYRSRPAPATLHKGCDRQLFGPQGEIVSPSLSP
DVRKAGTCRVFISVAPQARIAIRALASDVGTASEGTYANYVLVRDIHSLKTTTFWGQQVL
YWESEGSEAELEFSPGFLETHASLQGQYWTIPPRTPEQDKSLVLS
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgagccagctttgcctatggttgatgtgccagccttttcatgctgccagtatcagagga
atcctcactggtgccatcttcattctgggctgctgggggctctctgatttccagaagagt
tttcttcaggatctgaagcccaagggcatatcttcttactttggccgccatgccgctcca
ctcacaggccatccttcctctcacctccagagactgaggcggagaaggacattggaggac
attctgcacctggaactcctggtagctgtgggccctgatgtttaccaggctcatcaggag
gacacagagcgctatgtgctcactaatctcaatatcgggtcagaactgttgagaaaccca
tccttaggggctcagttccaggtacacctggtcaagttgatcatcctctctaacttggag
agtactccaaatatcacaaccaacatcacctcatccttgatgagtgtctgtgagtggagc
cagacgatcaacccccacgatgacagagatccaagccatgctgacctgattctctatata
accaggtttgacctggagttgcctgatggtaaccagcaggttcggggggtcacccagctg
ggaggtgcctgctccccttcctggagttgccttatcactgaggacactggctttgaccta
ggggtcaccatcgcccatgagattgggcacagcttcgggctggaccatgatggtgctcca
ggcagaggcagcacctgtgaggccagtggccatgtgatggcatctgatggcgcagtgcct
actggaggggccctggtgtggtccacctgcagccaaaggcagctgcagcacctgctcagc
gcagggcaaatgcactgcttctgggacccgcctggactgcagtcaggacttacagggcac
cagctggtggcacagcctggcctctactacagtgtagatgatcagtgtcgtgtggctttc
ggctcgggggctatcgcctgcaccttctccagggagggtctggatgcatgccaggctctg
tcctgccacacagaccccctggaccaaagcagctgcagccgcctccttgttcctctcctg
gatgggacagaatgtggtgtggagaagtggtgctccaaggctcgctgtcgctcccttgct
gagctggctcctgtggctgcggtacatggacactggtctagctggggcccccctagtcct
tgctctcgatcctgtggaggaggtgtgatcaccaggaggcggtggtgcaacaaccccagg
cctgcatttgggggacgtgcatgtgtgggtgaggacctccaggctacgatgtgcaacacg
caggcttgtgagaagactcagctggagtttatgtccgagcagtgtgcccagacagacaga
cagccactggaactttcccaaggcactgcctccttctaccactgggatgctgccatgcag
tatagtcaaggagatgctctgtgcagacacatgtgctgggctgttggagaaagcttcatt
gtcagccgtggagacagtttcctagatgggacccgttgtgtgccaagtggtcctcaggag
gatgggaccctaagcctctgtttgtcgggcagctgcaggacctttggctgtgatggcagg
atggactcccagcaggtttgggatatgtgccaggtgtgtggaggagacaatagcacctgc
agttcacagaatggctctttcacagctgggagagctagagaatatgtcacgttcctgata
gttactcccaatatgaccagcgtgcacatcgtcaaccgcaggcctctcttcacacacttg
gctgtgaggatccagggccactacatcgtggctgggaagaccagcatctcgtctaacatc
acaaacccttcccttctggaggactaccgcctggagtacagagtgactctcactgaggac
cagctgccccacttagaggagattcacatccggggacctgtccgggaggacattgagata
caagtgtacagacgatacggaggtgaatatgggaatcttacacatccagacatcaccttt
acctactttcaactgaagcaacaggcagcctgggtatggacccctaagcacggaccctgc
tcagtgagctgtggagcagggctgcgctgggtgacctacagctgccaggatcaagctcaa
aacaagtgggtggagaacgcccagtgccaagggagcccacagccatctgcatggcaagag
ccttgtgtctctgccccctgctccccatattgggtatccggagatttcagcccatgtagc
gtgtcttgtggtgggggcctacgggagcggtcactgcattgtgtggaagcccaagacggc
ttcttaaagatgctgccaccagcccggtgcagagcggtagcccagcagccagcaacagag
gtggaaaactgcaactcccagccctgtcccaccagatgggaggtgtcagaccctggtcct
tgcaagtcatctgcctgtgaagcaggtctggactcaaggaatgtgacatgcgtgcccagg
gtgggtgaccgggagaagccagcaactgcaggtccctgccgcacagatgagatgtcacct
atgctggagccctgtttcaggactacatgctctccagactcgggtcaggtgggcaccatg
tctctgggagaggaggctccatccccagtaggcagtgacaagccaggctctcaggctgaa
catgtgtggactcctctggtggggctgtgctccatttcttgtgggagaggtctgaaggaa
ctgtatttcctgtgcatggattctgtcctcaagatgcctgtccaggaagagctatgtggt
gtggctagtaagcccccgagccggtgggaggtctgcagggttcgcccatgtcctgctcgg
tgggagactcaagtcttggcaccgtgcccagtaacctgtggaggcgggcaagtgccactg
gctgttcgttgtgtgcggctggaccatggccgccctgtgtctgtagctcactctaagtgc
tggccagtgcctaggccacactcctttgaggactgcagccctgagccttgtcctgctaga
tggaaagtcctgtcccttggcccatgctcagccagctgtggccttggcactgccacacaa
atggtggcctgcatgcagcttgaccaaggccatgacaatgaggtgaatgaaactttttgt
aaggctctggtgcggcccctggccagtgtcccctgcctcgttgctgactgtgcataccga
tggcacatcggtacctggacagagtgctctgtctcctgtggggaaggcatccagcgccgg
catgacacctgccttggaccccaggcccaagtgcctgtgccagccaacttctgccaacac
ctgcccaagccagtgactgtgagaggctgctgggctggaccctgtgcagggcaggagatc
tcccgctcactgactcacacggaagctactcttcccagtcagacccaggctgctgttact
gttgcctctctgcagtggacccagccccaagcccaggcccgcaccctattcccagcctcc
cagtctctggggctccaggaaaacctggaagagcctggtgcctgtggaaggcagtacctg
gaacccacaggaatcattgacatgcgaagtaaaggacagctagactgtgtggtggccatt
gggagacctctaggtgaagtgctgaccctccaaatcctcgagagctccctcaagtgtagt
gcaggggagctgctgctgctctggggtaggttcacatggaggaagatatgctggaagatg
cttggcatgactttcagcaccaaaaccaacacgttggtggtgaggcagcaccgtgttgtg
ccaggaggtggagtgttgctacagtaccggagtcgacctgccccggcgaccctccacaaa
ggatgtgacaggcagctctttggacctcagggtgaaattgtgagtccctcactgagccca
gacgtgaggaaggcagggacctgcagggtcttcatcagtgtggctccacaggcccgcatt
gccatccgtgccctggccagtgatgtgggcactgcttctgaggggacctatgccaactat
gtcttggtcagggatatccacagtctgaagaccacgacattttgggggcagcaggtgctc
tactgggagtccgaaggcagcgaggctgaactggagtttagccctggcttcctggagacg
catgccagccttcagggtcagtactggaccatcccaccgaggacaccggaacaggacaaa
agtctggttctgtcctag
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