Arvicanthis niloticus (African grass rat): 117704003
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Entry
117704003 CDS
T08817
Symbol
Sox12
Name
(RefSeq) transcription factor SOX-12
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117704003 (Sox12)
Transcription factors [BR:
anu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117704003 (Sox12)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117704003
NCBI-ProteinID:
XP_034351831
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All DBs
Position
2:complement(121580743..121583322)
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AA seq
314 aa
AA seq
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MVQQRGARAKRDGGPPPPGPGPAAEGAREPGWCKTPSGHIKRPMNAFMVWSQHERRKIMD
QWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKHMADYPDYKYRPRKKSKGAPA
KARPRPPGGGGGGNRLKPGPQLPGRGGRRATGGPLGGGAAAPEDDDEDEEEELLEVRLLE
TPGRELWRMVPAGRAARGPAERAQGPSGEGAAASAASPTLSEDEEPEEDEEEAATAEEGE
EENVASGEEPLGFLSRMPPGPAGLDCSALDRDPDLLPPSGTSHFEFPDYCTPEVTEMIAG
DWRPSSIADLVFTY
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcagcggggcgcgcgggccaagcgggacggcgggccgccgcccccggggccc
gggccggccgccgagggggcgcgcgagccaggctggtgcaagaccccgagcggccacatc
aagcgaccgatgaacgcgttcatggtgtggtcgcagcacgaacggcgaaagatcatggac
cagtggcccgacatgcacaatgctgagatctccaagcgcctgggccgccgctggcagctg
ctgcaggactcggagaagatcccgttcgtgcgggaggcggagcggctgcgcctcaagcac
atggcggactacccggactacaagtaccggcctcgcaagaagagcaagggggcgcccgcc
aaggcgcggccccgcccccccggaggcggcggtggtggcaatcggctgaaacccgggcca
cagctgccgggccgcgggggacgccgagcgacgggaggacctctcgggggcggcgcggcg
gcgccggaggacgacgacgaagacgaagaggaggagctgctggaagtacgcctgctggag
acccccgggcgcgagctgtggaggatggtcccggcggggcgcgccgctcgcggacccgcg
gagcgcgcgcaggggccatccggcgagggggcggccgccagcgccgcctctccgaccctg
tcggaggacgaagagccggaggaggatgaggaggaggcggctacagcagaggagggtgaa
gaggagaatgtggcatcgggggaggagccgctgggttttctgtccaggatgcccccgggc
cccgccggtctggactgcagtgccctggaccgcgacccagacctgctgcccccttcgggc
acgtcacatttcgaattcccggactactgcacccccgaggttaccgagatgatcgcaggg
gactggcgcccgtctagtatcgccgacctggttttcacctactga
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