Arvicanthis niloticus (African grass rat): 117704014
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Entry
117704014 CDS
T08817
Symbol
Rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
KO
K11138
telomere-associated protein RIF1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
117704014 (Rif1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anu03032
]
117704014 (Rif1)
DNA replication proteins [BR:
anu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117704014 (Rif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rif1_N
Motif
Other DBs
NCBI-GeneID:
117704014
NCBI-ProteinID:
XP_034351852
LinkDB
All DBs
Position
2:29154253..29201835
Genome browser
AA seq
2421 aa
AA seq
DB search
MTAPGRSPLEPLLETWEDPSVAPGEQTDAYLTLTSRMTGEEGKEVIAEIEKNLPRLYTVL
KAHISSQNSELSSAALQALGFCLYNPRITSGLSEANIQELLLTLNGIIKSSDKNVCTRAL
WVISKQTFPAELVSKMVSSIIDSLEVILSKGEIHSAVVDFEALNVIIRLIEQAPTQMGEE
SVRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLHKQQEIALITEHLMTTKLISELQKL
FMNKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGTPMIKKIAFIAWKSL
IDNFALNPDILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPQLPANFEQV
CVPLIQSTISVDSIASPQGSSSRGSTSPGLSPLTPGHKGASPYGTPRVNLGSNIGGMATI
PSIQLLGLEMMLHFLLGPEVVNFAKQHKIVLSLEPLEHPLISSPSFFSKYAHTLITAVND
SFVAVGKDASDAVVSAIWKELISLVKSVTESGNRKERSGSEVLTLLLKSLENIVKSEVFP
VSKTLVLMEITVKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNNLLECGVEDEKF
FFNLETLVGCVLSGPTSPLAFSDSVLTVINQNAKQLANKEHLWRIWSMIVTPLTDVIHQT
NEVNQGDALEHNFSAIYGALTLPVNHIFSAQTFPTGPMKTLLKTWSELYRAFTRCAALVA
TAEENLCCEELSSKIMCSLEDEALSDLQFLDRISHIIIVMVDCIDFSPYNIKYQPKIKSP
QRSSDWSRKKKEPLGKLASLFKLIVRVIDSFHTLSLKETYSDTLLAIGNSIISMLSNIFG
HISLPSMIREIFATFTRPLALLYENSKLDQVPKVYTSLNNKLEKLLGEIVACLQFSYLGA
YDSELLGQLSPLLCIIFLHKNKQIRKQSALLWNATFAKATALVYPEELKPILRQAKQKIV
LLLPGLENVEMMDESSGPYSDATENSQLNVKISGMERKPSGKRDSILAHTKDKKENVKLS
AKLKLESSSPKIKSGKLLEEEKSTDFVFIPPEGKETKARILTEHQKEVLKTKRCDIPALY
NNLDASQDTLFSAQFTQEESMDSLTLTEKPKEDVKIIKEEQMESAIFIPRDAPEKCGIDE
HPKKASLPNYGGSVAETNPETLSTGFDTRKETLISSKIVSAECSSSTETSVVISSSVSNA
TFSGTPPQPTSRRQTFITLEKFDGSETRPFSPSPLNNMSSTVTVRNNQDNTTKTDMPTKA
RKREVTHSKSDLEKLSNAGKKSSRRWSKAEQSVNKKSKSSLTPEQEEHSFENNPPDLLNP
TECVSENRDHPSDATLEHEDRDTKPAVENASLEDLTTEEKNVGINMESKGNTSPVVASTE
QVVNEDSQAAAVTPNPKTLRRSSRRRSEVVESCSDSQDKESGQQKKERRKEEEKTVSKSL
LHIKDDKLPKQKLTAEPPIQENLTEKGNSLPERTLGEPSATAEIDQNRRKPDLENVSSEG
GGTLDNTDKSSEKPLRGRTRYQTRRASQGLISGVENSESDSSEAKEEVSRKKRSGKWKNK
SSDTVDIEEQEEKMVEEEVMKTANQTHDGQALPDVDINAAAQVCEKNTNNNRVILQDSFG
SADSLQVSLTGEGKSKTTSKCVDSSFVSLPVPESNLRTRNASKRLYKRDTDSNVGASDIS
VSPEKCTQVVECQHKRSRRVRRSKSCDCCGEKSHFQEKSFIGLKNTESYDIKSVETKKTD
IQVPETAPGTCETNEHAETKLVGEQPNRNFHLGLEENSTTGDLIKSEAGLEEHSKNSPPS
EIVNMKEKTYDTDASEAVSEIQEPCNEKYNAAEDPCLSDCKGISQKYPLDSEVESPEAIL
KSEFDISDIGKASKVIAGSSAERVETMELNVRNDASGTAVSEKSTPMDVSVDGATEEAVT
TEVNAEGVATEDFNSSMGLSDATTPVSKDVQTEPPATAELEGDSNESDSGSCEEMNKEME
SYKGQTNIEIDNARVKDMDKTANTSKSEGSLIGGLDINTESFVSDIEMSSGEETVNCKTE
TNIELSKLDEASGNHTIVGNDTLQEVCFTSEKVEELSQSLISKVASELGAESNNTSPEKL
ELDPSFGSTSESPSRMQARCVWSPLASPSTSILKRGLKRPQEDEISPVNKVRRVSFADPI
YQAGLADDIDRRCSVVRSHSSNSSPIIKSVKTSPTSHSKHNTTSAKGFLSPGSQSSKFKS
SKKCLITEMAQESMLSSTECVYPALVNCAASVDIILPQITSNMWARGLGQLIRAKNIKTI
GDLSTLTASEIKTLPIRSPKVFNVKKALRIYHEQQMKSRGLEEIPIFDISEKAVNGVESK
ALSTDEERLASDLIDPVTLDTPLSKNLVAQISALALQLDSEDLYSYSGSQLFEMHEKLGT
MANSIIRNLQSRWRSPAHENS
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccaggtcgcagccccctggagccgcttctggagacttgggaagacccctcg
gtggctcccggcgagcagacggacgcctacctaactctgaccagtcgtatgactggagaa
gaaggaaaagaagtcattgcagaaatcgagaaaaaccttcctcggctgtatacggtttta
aaggctcacatttccagtcagaactcagaactgagtagcgctgctctacaagccttgggc
ttttgtttatataatcccagaattacctcaggattatcagaggcaaatattcaagaactg
cttttaaccttgaatggtatcattaagagttcagacaaaaatgtgtgtaccagggcactg
tgggtaatatccaaacagacgtttcctgctgaacttgttagcaaaatggtatccagtatt
attgattcattggaagtgatactaagtaaaggagagatacattctgctgttgttgatttt
gaagcattaaatgttattataaggctaattgaacaagccccgactcaaatgggagaggag
tctgtgaggtgggccaaattggtcataccattagttgttcactcagcacaaaaagtacat
ctgaggggagccactgctctagagatggggatgccattgctgcttcataaacaacaagaa
atagccttgattacagagcaccttatgactactaaattaatctcagaactccaaaagcta
tttatgaataaaaatgagacttatgtgttaaaattatggcctttgtttgtcaaacttctt
ggaaagaccttgcaccggagtgggagtttcatcaattctttgttacaactggaagaactg
ggcttccgtagtggaacacccatgattaaaaaaatagctttcattgcttggaaaagctta
atagataattttgctttaaaccccgatatactttgtagtgcaaaaagactgaagttgtta
atgcagcctttgagttccatccatgtgagaacagaaactttagcattaacaaaactagaa
gtctggtggtacttgttgatgagacttggacctcagctccctgccaattttgaacaggtt
tgtgtgccactgattcagagtacaataagtgttgatagtattgcttcacctcaaggcagt
tcatctcgagggtctacttctcctggcttaagtccactgactcctggacataaaggtgct
tctccttatggaactcctcgtgtcaacctgggttcaaatataggtggaatggctacaatc
ccttctattcagcttttgggactggaaatgatgcttcattttttgttgggtccagaagtc
gtgaattttgccaagcaacacaagattgtattgagtttagaaccactggaacacccgcta
atcagcagcccttctttcttctccaagtatgcacacacacttatcactgctgttaatgat
agctttgtcgcagttggaaaggatgcctcagatgcagtagtcagtgctatctggaaggag
ctaattagcttggtgaagtcagttactgaatcaggaaacagaaaagaaagatcaggttct
gaagttttgaccctcctactaaaatctttggaaaacatagtgaagtcagaagtatttcct
gtttcaaaaacactggttctcatggaaattacagttaaaggacttcctcagaaagtatta
ggttcaccagcatatcaggttgctaatatggatattcttaatggaactccagcattgttt
ttaatccagttaatttttaacaacaatcttttagaatgtggtgtagaagatgaaaagttt
tttttcaatctagaaacacttgtaggctgtgtgctttctggtccgacatcaccactggct
tttagtgattctgtactaactgtgattaatcagaatgcaaagcagttggcaaacaaggag
catctctggagaatatggagtatgatagtcactccactgactgatgtgattcatcagacc
aatgaagtgaatcaaggcgatgccttagaacataattttagtgccatctatggtgctttg
actttaccagtcaaccatattttttcagcccagacatttcccacgggtcccatgaaaact
ttgcttaaaacttggtcagaattatatagagcatttactcgctgtgctgctttggtggca
acagcagaagagaatttgtgctgtgaagaactttcttctaaaataatgtgcagtttggaa
gatgaagccctttctgatttgcaattcttggacaggatttctcatatcattattgtaatg
gttgattgtatcgacttttcaccatataatataaaatatcagccgaaaatcaaatcacca
cagagatcttcagattggtccagaaagaagaaggaacccttagggaaattggcttcttta
tttaagctaattgtgagagtcatcgattctttccacactctaagcctcaaggaaacatac
tctgatacattgcttgctattggtaactctatcattagcatgctttccaatatatttgga
catatttccttgccctctatgatccgagaaatatttgcaacttttacaagacctctggct
ttactgtatgaaaactcaaagcttgatcaggttcctaaagtgtatactagtttgaacaac
aagttagaaaagctattaggagaaatcgttgcttgtctacagttcagctatcttggagct
tatgacagtgagcttcttggacaactttctccactcctgtgcataatatttcttcacaag
aataaacagattcggaaacagagtgctctgttgtggaatgctacatttgctaaagcgaca
gctctggtttatcctgaggaattaaaacccatattaaggcaagccaaacaaaaaattgtg
cttctgctgcctggtttggaaaatgttgaaatgatggacgagtccagtggaccatattca
gatgcaacagagaattcacaattaaatgtcaagataagtggcatggaaagaaaaccaagt
ggaaaaagagattccattttggcacatacaaaggataaaaaagaaaatgtgaaactgtca
gctaagctgaaactagaatcttcatctccaaaaataaagagtggtaagcttttggaagag
gaaaagtctactgactttgtcttcattcctccagaaggaaaagagacaaaggcaaggatt
ctaactgagcaccagaaagaagtactcaagacaaaacggtgtgatattcctgccttgtat
aataatctggatgcttcacaagatactttattttctgctcagtttactcaagaagaatca
atggatagcctcactttaactgaaaaaccaaaagaagatgtcaagataattaaggaagag
caaatggagagtgccattttcatccctcgagatgccccggaaaaatgtggaatagatgaa
catcctaagaaagcttcattaccaaattatggtggctctgttgctgaaaccaatccagaa
acactgagcactggttttgatactagaaaagaaacattaatttcatcaaagatagtgtct
gctgaatgttcatctagtacagaaacttcagtggtcattagtagttcagtttctaatgcc
actttttctggaacccctccacagcctacaagtcggagacaaacctttattactttggag
aaatttgatggttcagaaactagaccttttagtccatcccccttgaataacatgtcttcc
actgttacagtgagaaataaccaggataacacaactaaaactgacatgccaacaaaagca
aggaaaagagaagttactcactcaaaatctgatttagaaaaattatcgaatgcaggtaag
aaatcaagccgaagatggagtaaagctgagcagtcagttaataaaaagtctaagtcttca
ctgacacctgaacaggaagaacattcattcgaaaataaccctcctgatttgctcaatcca
acagaatgtgtgtcagaaaatcgtgatcatccttcagacgctaccctagagcatgaagat
agggatactaaaccagcagtagaaaatgcttcattggaagacttaacaacagaagagaaa
aatgtaggcattaatatggaatctaaaggaaatacatccccagttgtagcatcaacagaa
caagttgtaaatgaagatagtcaggctgctgcagtaactccaaatccaaaaacactcaga
cggtcttcaaggcggcgttcagaagtagtagagtcttgcagtgacagccaagataaggaa
agtggccaacaaaaaaaggagagacgaaaggaagaagaaaaaacagtttcaaagagtctg
ttgcatatcaaagatgataagttgcccaagcaaaaactaactgctgaaccacctatacag
gaaaatttaactgaaaaaggaaacagtttacctgagagaactttaggggaacccagtgct
actgctgaaattgaccaaaatagaagaaaaccagaccttgagaatgttagttctgaagga
ggtggtaccctggacaatacagataagtcatctgagaaaccattaagaggacggacacgt
tatcaaacaagaagagcttctcagggcttgatttctggtgttgaaaactcagaatctgat
agttctgaggccaaggaagaagtttctagaaagaaacgatcggggaaatggaaaaataaa
agcagtgatactgttgacattgaagagcaagaagaaaaaatggttgaagaggaagttatg
aaaactgcaaatcagacacatgatggtcaggcacttcctgatgttgatataaatgcagcg
gctcaggtttgtgaaaaaaatacaaataacaatagggtaatccttcaggattcttttggg
tctgcagattcactgcaagtttcgcttacaggcgagggtaaaagtaagactactagcaaa
tgtgtagacagttcatttgtaagtctgcctgtgccagaatcaaacctcaggactaggaat
gccagtaagagattatataaacgagacactgacagtaatgtgggggcatcagacatttct
gtctctcctgaaaaatgcacccaagtagttgaatgccaacacaagagaagtaggagagtc
aggagatctaaaagttgtgactgctgtggggaaaaatcacatttccaggaaaagtcattt
attgggttaaagaacacggaaagttatgacataaagagtgtggagacaaagaagacagat
atacaagtacctgagactgcacctggaacttgtgaaactaatgagcacgctgaaacaaag
ttggtaggtgaacagcctaataggaattttcatttgggtcttgaagaaaattctactact
ggtgatttaattaagtctgaagctggattggaagaacatagtaaaaattcccctccatct
gaaatagtaaatatgaaagaaaaaacttatgacacagacgctagtgaagcagtatctgaa
atccaagaaccatgtaatgaaaaatacaatgctgctgaggacccatgcttaagtgattgc
aaaggcatttcacagaaataccctttagatagcgaagtagaaagtccagaagctattctg
aaaagtgagttcgacatcagtgatatagggaaggcatccaaagtaatagctgggtccagt
gcagagagagttgaaactatggaattaaatgtaagaaatgacgcctctggaactgctgtc
tctgaaaagagtaccccaatggatgtttctgtagatggggcaacagaggaagcagtcaca
actgaagtgaatgctgaaggagtagccactgaggactttaattcaagtatgggtctttct
gatgctaccacacctgtaagcaaggatgttcagactgagcctccagccactgcggaacta
gagggggatagcaatgaatctgattcaggctcatgtgaggaaatgaacaaagaaatggaa
agttacaaaggccagacgaacattgaaattgacaatgccagggtaaaggatatggacaag
actgctaacacttctaaatctgaaggatcattgattggaggactagacatcaacactgag
agctttgttagtgacattgaaatgagttctggagaagaaactgttaattgcaaaactgaa
acaaacattgaacttagtaagttagatgaagcaagtggcaatcatactatagtgggaaat
gataccctgcaggaagtttgctttacttcagagaaagtggaggaattatcacagtctctg
atatccaaagtggcttctgaacttggagcagaaagcaataatacatctcccgaaaagtta
gagctggatccttcttttggatcaacaagtgaaagtcctagtcgtatgcaggcacgctgt
gtctggtcacctttggcttctccatccacaagcattttaaagagaggactgaaaagaccc
caagaagatgagatctctccagttaacaaggttagacgtgtttcatttgcagatccaata
taccaagcaggattggcagatgacattgataggcgctgctctgttgttaggtctcattct
tcaaatagctctcctataataaaaagtgttaaaacctcacctacttcacactctaagcat
aataccacttcagccaaaggatttctgtccccaggatcacagagctctaaatttaagagc
tcaaagaagtgtttaattacagaaatggcccaagaatccatgctatcctcaacagaatgt
gtttatccagctttggtgaactgtgcagcatcagttgacatcattttacctcagattaca
tctaatatgtgggcaagaggtctcggacaacttattagagccaagaatataaaaacaatt
ggtgatttgagtacgcttacagcatctgaaataaaaactcttcctattcgctctccaaag
gtgtttaatgtaaaaaaggccctcagaatataccatgagcaacagatgaaatctcgtgga
cttgaagaaattccaatttttgatatttctgagaaggcagtaaatggagtagagagcaag
gccctctccactgatgaggaaaggctcgcctcagatttaattgatcctgtgaccctagat
acgccattgtctaaaaatcttgtggcacaaattagtgctcttgctcttcaactggactca
gaagatctctacagttattctggaagccagctatttgaaatgcatgaaaaacttggtacc
atggcaaactctataataagaaatctacagtcacgttggagatcaccagcccatgaaaat
tcttag
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integrated database retrieval system
