Arvicanthis niloticus (African grass rat): 117704019
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Entry
117704019 CDS
T08817
Symbol
Ap4e1
Name
(RefSeq) AP-4 complex subunit epsilon-1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117704019 (Ap4e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117704019 (Ap4e1)
Membrane trafficking [BR:
anu04131
]
Endosome - Golgi transport
Others
AP-4 complex
117704019 (Ap4e1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Cnd1
Coatomer_b_Cpla
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
117704019
NCBI-ProteinID:
XP_034351859
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All DBs
Position
2:97969850..98038002
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AA seq
1130 aa
AA seq
DB search
MSDMVERTLTALPGLFLQNQLGGPAASRAPFFSRLGGLIRGVTALSSKHEEEKLIQQELS
SLKATVSAPTTTLKMMKECMVRLIYCEMLGYDASFGYIHAIKLAQQGNLLEKRVGYLAVS
LFLHESHELLLLLVNTVVKDLQSTNLVEVCMALTVVSQIFPREMIPAVLPLIEDKLQHSK
EIIRRKAVLALYKFYLIAPNQVQHIHTKFRKALCDRDVGVMAASLHIYLRMIKENSSGYK
DLTGSFVTILKQVVGGKLPVEFSYHSVPAPWLQIQLLRILGLLGKDDERTSELMYDVLDE
SLRRAELNHNITYAILFECVHTIYSIYPKSELLEKAAKCIGKFVLSPKINLKYLGLKALT
YVIQQDPSLALQHQITIIECLDHPDPIIKRETLELLYRITNAQNVVVIVQKMLEYLHQSK
EEYIIINLVGKIAELAEKYAPDNVWFIQTMNAVFSVGGDVMHPDILSNFLRLLAEGFDDE
TEDQQLRLYAVQSYLTLLDMENTFYPQRFLQVMSWVLGEYSYLLDRESPEEVITRLYKLL
MSDSISSETKAWLFAAVTKLTPQAHSSHIVEKLIQEFTVSLNTCLRQHAFELKHLHENVE
LMKSLLQGAQNCEDIMVDASLSFLDGFVAEGLSQGAAPYKPLHQRQEEQVSQEKVLNFEP
YGLSFSSSGFTGRQSPAGISLGSDISGNSAETGLKETSSLKMEGIKKLWGKEGYLPKKES
GIGDKPEAPHAPAEGATMENVDQAKTKKDQAQGHTPSTEEKEKQLLASSLFVGLGPENTI
SLLGKADVVSHKFRRKSKLKVAQSDRTPSAHTTPSSALSSVSDVAGRDEDGLDAVDSGHG
ELSSELLGSESLSELPSVENLSSVSLPAPSLFADNNMEVYHPPSSSATSTVKEISLASLL
ELTPECRHSGLMEICSNETVSVSSYKVWKDDYLLVIWSVTSKTDSEFTDAQLEIFPVENF
KIIEQPRCSSPVMETESTKSFQYGVQMKSPCVEGTLSGFIKYQMVDTHSVQLEFSINLSL
LDFIRPLKISTEDFGKLWLSFANDVKQTIKISEPPLALASVLTELQQKLRLRVIDIIGNE
GLLACKLLPSTPCVLHCRVHADMVALWFRSSSSVLSDYLSCHCQKVMQTS
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatggtggaaagaacgctgaccgcactgccggggctcttcctgcagaaccag
ctgggagggcctgcggcctccagagcacccttcttctccaggctgggcggcctcatccgt
ggcgtcaccgcgctctcatccaagcacgaagaagagaaattaatccagcaggaactgagt
agtctgaaggcaactgtttccgctcctactacgacactgaaaatgatgaaggaatgtatg
gtgagacttatatactgtgagatgcttggatacgatgcttcttttggttatatacatgca
atcaagttggcccaacaaggaaacctcttagaaaaaagagtgggttatttggctgtttct
ttatttctacatgaaagtcatgaacttttgcttctccttgtgaatacagtggtaaaggac
ctgcagagcactaatctggtagaagtatgtatggcacttactgttgtcagccagattttc
cctcgagaaatgattccagctgttcttccactaatagaagataaacttcaacattctaag
gagattatacgaagaaaagcagttctggcattatacaaattttacctcattgcccctaat
caagtacagcatatccatactaaatttcggaaagcactctgtgacagagatgttggggtc
atggctgcctctttgcatatataccttaggatgattaaggaaaattcttctggatataaa
gacttgactgggagttttgtaacaattttaaagcaagtagtgggaggaaagctcccagtc
gagttcagttaccatagtgtgccagcaccatggctacagattcagctcttgagaatcctg
ggactgctgggaaaagacgatgaaaggacaagtgaattaatgtatgatgttcttgatgaa
tccttacgaagagccgagttaaatcacaatatcacttatgctattctgtttgaatgcgta
cacacaatctattctatttatcctaaatcagaattacttgagaaggctgccaagtgcatt
ggaaaatttgttctgtcacctaaaataaacctcaaatatttaggactgaaggctcttacc
tatgttatccagcaggatccttctctggctcttcaacaccagataaccataattgaatgc
ctagaccaccctgatcccattattaaaagagagactctggaacttctttacaggattaca
aatgcacagaatgtagtagttattgtacaaaaaatgcttgaatatttacatcagagcaaa
gaagagtatatcatcatcaatttagttggcaaaatagccgagttggctgagaaatatgct
cctgacaacgtgtggtttattcagacaatgaatgctgtgttttcagtgggaggagatgta
atgcaccctgatattctcagtaacttcctgagactgctagcagaaggttttgatgatgaa
acagaagatcaacaattaagactctatgcagttcagtcttaccttactttattagatatg
gaaaatactttctatccacagagatttcttcaagttatgagctgggtattaggagagtat
tcctacctcttagatagagaaagtccagaggaggttataaccaggctctacaagttactt
atgagtgactccatttcttcagaaacaaaagcctggttgtttgcagcggtaaccaagttg
acacctcaagctcattcttctcacatagttgagaaattaatccaagaattcactgtatcc
ttgaatacttgtctgagacaacatgcgtttgaattgaaacacctgcatgaaaatgtagag
cttatgaagagcttgcttcagggtgctcagaattgtgaagacatcatggtggatgcttct
ttatctttcctggatggttttgtggctgaaggactcagccagggagcagcaccttataag
ccccttcaccagcgccaagaggaacaggtctctcaggaaaaagttctcaattttgaacca
tatggactatcattttcttcatctggcttcactggacgacagtctcctgctggcatttct
ctgggctcagatatatctggaaacagtgctgagacagggctgaaagagacaagtagcttg
aagatggaaggtataaagaaattatggggtaaagagggctatcttcccaagaaggagagt
ggaattggtgataaaccagaagccccgcatgctcctgcagagggtgcgacaatggagaat
gtagaccaagccaagaccaaaaaggaccaagctcaaggccataccccttctacagaggag
aaagaaaagcaactgttggcatcatcactatttgttgggctaggaccagaaaatacaata
agtttgttgggaaaagcagatgttgtgtctcacaagttcagaaggaaatcaaaactcaag
gtagcccaaagtgacaggacacccagtgctcataccactccctcctccgcccttagctcc
gtatcagacgtggctggtagagatgaggacggtctggatgctgtggatagtggacacggg
gaactcagttcagagcttttgggttctgagtctctgtcagagctgccctcagttgaaaac
ctctcaagtgtcagcttgcctgcaccttctttgtttgccgataacaacatggaagtctat
catcccccttcatcctctgcaacttcaactgtcaaggaaatcagtttagcttctttgttg
gaactaactcctgagtgcaggcattcaggtctcatggaaatctgcagtaatgaaaccgtg
tctgtgtcttcttacaaagtctggaaggatgattatttattggtgatctggtcagtcact
agtaagactgactcagagttcacagatgctcagttagaaatttttcctgtggaaaatttc
aagatcattgagcaacccagatgttcttcacctgtgatggaaacagaaagcaccaaatcc
tttcagtatggtgtgcagatgaaaagcccttgtgtggaggggactctctctggttttata
aagtatcaaatggtggatacacattctgttcaactggaattttccataaacttatcatta
ttagattttatcagaccattaaagatctcaactgaagactttggcaaactctggttgtcc
tttgcaaatgatgtgaagcaaactataaaaatatcagagcctccacttgctctggcttct
gtcctaacagagctgcagcagaaactgagacttcgtgtgattgacatcataggcaacgaa
ggtctgttggcctgtaagctgctcccatccaccccctgtgtcctgcactgccgagtacat
gctgacatggtagccctgtggttccgatcctcaagctctgttctttcagactatttatca
tgtcactgtcaaaaagtgatgcagacatcctag
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