Arvicanthis niloticus (African grass rat): 117704078
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Entry
117704078 CDS
T08817
Symbol
Rae1
Name
(RefSeq) mRNA export factor
KO
K14298
mRNA export factor
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
anu05014
Amyotrophic lateral sclerosis
anu05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117704078 (Rae1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
117704078 (Rae1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117704078 (Rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117704078 (Rae1)
03036 Chromosome and associated proteins [BR:
anu03036
]
117704078 (Rae1)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117704078 (Rae1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117704078 (Rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_Nup120_160
WDR90_beta-prop_4th
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
117704078
NCBI-ProteinID:
XP_034351949
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All DBs
Position
2:141967426..141982324
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AA seq
368 aa
AA seq
DB search
MSLFGSTSGFGTGGTSMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPIAACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtttggatcaacctctggttttgggactggtgggaccagcatgtttgggagc
acaaccacagataaccacaacccaatgaaggatattgaagtaacgtcttctcctgatgac
agcattgggtgtctgtctttcagcccgccaaccttaccaggcaacttccttattgcagga
tcatgggctaatgatgttcgatgctgggaagtgcaagacagtgggcaaaccattccaaag
gcccagcagatgcacaccgggccagtgcttgacgtctgctggagtgatgatgggagcaaa
gtattcacagcatcgtgtgacaagacagccaagatgtgggacctgaacagcaaccaggcc
attcagatagcacagcatgacgctcctgttaaaaccatacattggatcaaagcaccaaac
tacagctgcgtgatgactgggagctgggataagactctgaagttttgggatacccggtcg
tcaaatcctatgatggtcttgcaactccctgagcgctgttactgtgcagatgtgatatac
ccaatggctgtggtggccactgcagagaggggcctgattgtctatcagttagagaatcag
ccctcggagttcaggagaatagagtctccactgaagcaccagcaccggtgtgtggctatt
tttaaagacaaacagaacaagccgactggttttgctcttggaagtattgaggggagagtt
gccattcactacatcaaccctccaaatccggccaaagataacttcaccttcaaatgccac
cgatccaacggaaccaacacttccgcccctcaggacatctatgcagtgaatggaattgcc
tttcaccctgtccacggcacccttgccactgtgggctctgacggtcggttcagcttctgg
gacaaagatgccaggacaaaactaaagacttcggagcagttagatcagcccatagcagct
tgctgcttcaatcacaacggaaacatatttgcttatgcttccagctacgactggtccaag
ggacatgagttttataatccccagaagaaaaattatattttcttgcgtaatgcagctgaa
gagctaaagccaaggaataagaagtag
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